RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 SNRPA1P09661 255 aaKnown RBP28.08■■■□□ 2.09
PKD1-240ENST00000570253 PRELPP51888 382 aa28.08■■■□□ 2.09
PKD1-240ENST00000570253 MASTLQ96GX5 879 aa28.08■■■□□ 2.09
PKD1-240ENST00000570253 BCORQ6W2J9 1755 aa28.08■■■□□ 2.09
PKD1-240ENST00000570253 COL11A2P13942 1736 aaPredicted RBP28.07■■■□□ 2.08
PKD1-240ENST00000570253 CLEC4GQ6UXB4 293 aa28.07■■■□□ 2.08
PKD1-240ENST00000570253 NBPF5PQ86XG9 351 aaPredicted RBP28.07■■■□□ 2.08
PKD1-240ENST00000570253 LTBP3Q9NS15 1303 aa28.07■■■□□ 2.08
PKD1-240ENST00000570253 DICER1Q9UPY3 1922 aaKnown RBP28.06■■■□□ 2.08
PKD1-240ENST00000570253 KCNQ3O43525 872 aa28.06■■■□□ 2.08
PKD1-240ENST00000570253 FER1L6Q2WGJ9 1857 aa28.06■■■□□ 2.08
PKD1-240ENST00000570253 USP16Q9Y5T5 823 aa28.05■■■□□ 2.08
PKD1-240ENST00000570253 HTATSF1O43719 755 aaKnown RBP28.04■■■□□ 2.08
PKD1-240ENST00000570253 SRGNP10124 158 aa28.04■■■□□ 2.08
PKD1-240ENST00000570253 PRPF40BQ6NWY9 871 aaKnown RBP28.04■■■□□ 2.08
PKD1-240ENST00000570253 MCM10Q7L590 875 aa28.04■■■□□ 2.08
PKD1-240ENST00000570253 CACNA1SQ13698 1873 aa28.04■■■□□ 2.08
PKD1-240ENST00000570253 PPP2R1AP30153 589 aa28.02■■■□□ 2.08
PKD1-240ENST00000570253 PIP4K2AP48426 406 aaPredicted RBP28.01■■■□□ 2.07
PKD1-240ENST00000570253 TPTE2Q6XPS3 522 aa28.01■■■□□ 2.07
PKD1-240ENST00000570253 ARFGEF2Q9Y6D5 1785 aa28.01■■■□□ 2.07
PKD1-240ENST00000570253 RGL2O15211 777 aa28■■■□□ 2.07
PKD1-240ENST00000570253 CCDC93Q567U6 631 aa27.99■■■□□ 2.07
PKD1-240ENST00000570253 NIP7Q9Y221 180 aaKnown RBP eCLIP27.99■■■□□ 2.07
PKD1-240ENST00000570253 SLX4Q8IY92 1834 aa27.99■■■□□ 2.07
PKD1-240ENST00000570253 NPR1P16066 1061 aa27.98■■■□□ 2.07
PKD1-240ENST00000570253 GTF2E1P29083 439 aaPredicted RBP27.98■■■□□ 2.07
PKD1-240ENST00000570253 PRAMEF22A3QJZ6 481 aa27.97■■■□□ 2.07
PKD1-240ENST00000570253 IQCA1LA6NCM1 817 aa27.97■■■□□ 2.07
PKD1-240ENST00000570253 TAF7Q15545 349 aaPredicted RBP27.97■■■□□ 2.07
PKD1-240ENST00000570253 POTECB2RU33 542 aa27.95■■■□□ 2.06
PKD1-240ENST00000570253 DCTN1Q14203 1278 aa27.95■■■□□ 2.06
PKD1-240ENST00000570253 CHADLQ6NUI6 762 aa27.95■■■□□ 2.06
PKD1-240ENST00000570253 PNISRQ8TF01 805 aaKnown RBP27.95■■■□□ 2.06
PKD1-240ENST00000570253 DDNO94850 711 aaPredicted RBP27.93■■■□□ 2.06
PKD1-240ENST00000570253 FAM177BA6PVY3 158 aa27.92■■■□□ 2.06
PKD1-240ENST00000570253 ALDH1B1P30837 517 aa27.92■■■□□ 2.06
PKD1-240ENST00000570253 LAMB4A4D0S4 1761 aa27.91■■■□□ 2.06
PKD1-240ENST00000570253 FKBP4Q02790 459 aaKnown RBP eCLIP27.91■■■□□ 2.06
PKD1-240ENST00000570253 RTKN2Q8IZC4 609 aa27.91■■■□□ 2.06
PKD1-240ENST00000570253 NYXQ9GZU5 481 aa27.91■■■□□ 2.06
PKD1-240ENST00000570253 NBPF26B4DH59 902 aa27.9■■■□□ 2.06
PKD1-240ENST00000570253 COL13A1Q5TAT6 717 aaPredicted RBP27.9■■■□□ 2.06
PKD1-240ENST00000570253 NBPF10Q6P3W6 841 aaKnown RBP27.9■■■□□ 2.06
PKD1-240ENST00000570253 NBPF15Q8N660 670 aa27.9■■■□□ 2.06
PKD1-240ENST00000570253 PNNQ9H307 717 aaKnown RBP27.9■■■□□ 2.06
PKD1-240ENST00000570253 TNS4Q8IZW8 715 aa27.89■■■□□ 2.06
PKD1-240ENST00000570253 CREBZFQ9NS37 354 aa27.89■■■□□ 2.06
PKD1-240ENST00000570253 KLRG2A4D1S0 409 aaPredicted RBP27.88■■■□□ 2.05
PKD1-240ENST00000570253 HSPA1AP0DMV8 641 aaKnown RBP27.88■■■□□ 2.05
PKD1-240ENST00000570253 HSPA1BP0DMV9 641 aaKnown RBP27.88■■■□□ 2.05
PKD1-240ENST00000570253 KIF6Q6ZMV9 814 aa27.88■■■□□ 2.05
PKD1-240ENST00000570253 SCN4AP35499 1836 aa27.88■■■□□ 2.05
PKD1-240ENST00000570253 LDHDQ86WU2 507 aa27.87■■■□□ 2.05
PKD1-240ENST00000570253 C7orf43Q8WVR3 580 aa27.87■■■□□ 2.05
PKD1-240ENST00000570253 NGEFQ8N5V2 710 aa27.86■■■□□ 2.05
PKD1-240ENST00000570253 L3MBTL3Q96JM7 780 aaPredicted RBP27.86■■■□□ 2.05
PKD1-240ENST00000570253 MIS18AQ9NYP9 233 aa27.86■■■□□ 2.05
PKD1-240ENST00000570253 MAPK8IP3Q9UPT6 1336 aa27.85■■■□□ 2.05
PKD1-240ENST00000570253 ERVV-1B6SEH8 477 aa27.84■■■□□ 2.05
PKD1-240ENST00000570253 HLFQ16534 295 aa27.84■■■□□ 2.05
PKD1-240ENST00000570253 ZNF277Q9NRM2 450 aaPredicted RBP27.84■■■□□ 2.05
PKD1-240ENST00000570253 DLG5Q8TDM6 1919 aa27.82■■■□□ 2.04
PKD1-240ENST00000570253 EAPPQ56P03 285 aaPredicted RBP27.82■■■□□ 2.04
PKD1-240ENST00000570253 JDP2Q8WYK2 163 aa27.82■■■□□ 2.04
PKD1-240ENST00000570253 RPGRQ92834 1020 aaKnown RBP27.82■■■□□ 2.04
PKD1-240ENST00000570253 TAF1DQ9H5J8 278 aaPredicted RBP27.82■■■□□ 2.04
PKD1-240ENST00000570253 HACL1Q9UJ83 578 aa27.82■■■□□ 2.04
PKD1-240ENST00000570253 CLEC11AQ9Y240 323 aa27.82■■■□□ 2.04
PKD1-240ENST00000570253 RRP7AQ9Y3A4 280 aaKnown RBP27.82■■■□□ 2.04
PKD1-240ENST00000570253 KDM3BQ7LBC6 1761 aa27.81■■■□□ 2.04
PKD1-240ENST00000570253 IARSP41252 1262 aaKnown RBP27.81■■■□□ 2.04
PKD1-240ENST00000570253 CC2D2BQ6DHV5 1058 aa27.81■■■□□ 2.04
PKD1-240ENST00000570253 MKRN1Q9UHC7 482 aaKnown RBP27.81■■■□□ 2.04
PKD1-240ENST00000570253 MAP3K15Q6ZN16 1313 aa27.81■■■□□ 2.04
PKD1-240ENST00000570253 POTEIP0CG38 1075 aa27.8■■■□□ 2.04
PKD1-240ENST00000570253 POTEJP0CG39 1038 aa27.8■■■□□ 2.04
PKD1-240ENST00000570253 NFE2L2Q16236 605 aa27.8■■■□□ 2.04
PKD1-240ENST00000570253 PNMA8AQ86V59 439 aaPredicted RBP27.79■■■□□ 2.04
PKD1-240ENST00000570253 SYNE4Q8N205 404 aa27.79■■■□□ 2.04
PKD1-240ENST00000570253 PCNTO95613 3336 aa27.79■■■□□ 2.04
PKD1-240ENST00000570253 NUP98P52948 1817 aa27.78■■■□□ 2.04
PKD1-240ENST00000570253 ZNF541Q9H0D2 1346 aa27.78■■■□□ 2.04
PKD1-240ENST00000570253 CAPN15O75808 1086 aa27.78■■■□□ 2.04
PKD1-240ENST00000570253 MYL6BP14649 208 aa27.78■■■□□ 2.04
PKD1-240ENST00000570253 EIF4A1P60842 406 aaKnown RBP27.78■■■□□ 2.04
PKD1-240ENST00000570253 GRIPAP1Q4V328 841 aa27.78■■■□□ 2.04
PKD1-240ENST00000570253 PSMD1Q99460 953 aa27.78■■■□□ 2.04
PKD1-240ENST00000570253 TMX4Q9H1E5 349 aaPredicted RBP27.78■■■□□ 2.04
PKD1-240ENST00000570253 IBTKQ9P2D0 1353 aaPredicted RBP27.77■■■□□ 2.04
PKD1-240ENST00000570253 NUTM1Q86Y26 1132 aa27.77■■■□□ 2.04
PKD1-240ENST00000570253 ERBB4Q15303 1308 aa27.76■■■□□ 2.03
PKD1-240ENST00000570253 EPHX2P34913 555 aa27.76■■■□□ 2.03
PKD1-240ENST00000570253 EIF6P56537 245 aaKnown RBP27.76■■■□□ 2.03
PKD1-240ENST00000570253 CRY2Q49AN0 593 aa27.76■■■□□ 2.03
PKD1-240ENST00000570253 OLFM4Q6UX06 510 aa27.76■■■□□ 2.03
PKD1-240ENST00000570253 TMEM88BA6NKF7 163 aa27.75■■■□□ 2.03
PKD1-240ENST00000570253 GPC2Q8N158 579 aa27.75■■■□□ 2.03
PKD1-240ENST00000570253 RBM17Q96I25 401 aaKnown RBP27.75■■■□□ 2.03
PKD1-240ENST00000570253 ZBTB3Q9H5J0 574 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms