RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
GDE1-205ENST00000569899 C6orf132Q5T0Z8 1188 aa12.92□□□□□ -0.34
GDE1-205ENST00000569899 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
GDE1-205ENST00000569899 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
GDE1-205ENST00000569899 CHL1O00533 1208 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 CYP27B1O15528 508 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
GDE1-205ENST00000569899 ZMYND10O75800 440 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 ITGB4P16144 1822 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 SPATA31A1Q5TZJ5 1347 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 NPDC1Q9NQX5 325 aaPredicted RBP12.91□□□□□ -0.34
GDE1-205ENST00000569899 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
GDE1-205ENST00000569899 C5P01031 1676 aa12.9□□□□□ -0.34
GDE1-205ENST00000569899 PTGDRQ13258 359 aa12.9□□□□□ -0.34
GDE1-205ENST00000569899 ZCRB1Q8TBF4 217 aaKnown RBP12.9□□□□□ -0.34
GDE1-205ENST00000569899 NGLY1Q96IV0 654 aa12.9□□□□□ -0.34
GDE1-205ENST00000569899 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
GDE1-205ENST00000569899 SPATA31A5Q5VU36 1347 aa12.9□□□□□ -0.35
GDE1-205ENST00000569899 SPATA31A7Q8IWB4 1347 aa12.9□□□□□ -0.35
GDE1-205ENST00000569899 GLI3P10071 1580 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 BCAR3O75815 825 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
GDE1-205ENST00000569899 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
GDE1-205ENST00000569899 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
GDE1-205ENST00000569899 PLIN1O60240 522 aa12.88□□□□□ -0.35
GDE1-205ENST00000569899 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
GDE1-205ENST00000569899 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
GDE1-205ENST00000569899 TEFQ10587 303 aa12.88□□□□□ -0.35
GDE1-205ENST00000569899 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
GDE1-205ENST00000569899 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
GDE1-205ENST00000569899 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
GDE1-205ENST00000569899 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
GDE1-205ENST00000569899 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
GDE1-205ENST00000569899 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
GDE1-205ENST00000569899 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
GDE1-205ENST00000569899 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
GDE1-205ENST00000569899 AFF2P51816 1311 aa12.87□□□□□ -0.35
GDE1-205ENST00000569899 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
GDE1-205ENST00000569899 VPS72Q15906 364 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
GDE1-205ENST00000569899 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 USP21Q9UK80 565 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
GDE1-205ENST00000569899 CACNA1FO60840 1977 aa12.86□□□□□ -0.35
GDE1-205ENST00000569899 VAMP4O75379 141 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 HIC1Q14526 733 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 BABAM1Q9NWV8 329 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
GDE1-205ENST00000569899 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 GNPATO15228 680 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 HS3ST6Q96QI5 342 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 ATRNO75882 1429 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 KCNQ3O43525 872 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 COL9A1P20849 921 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 FECHP22830 423 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 PTPREP23469 700 aa12.84□□□□□ -0.35
GDE1-205ENST00000569899 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
GDE1-205ENST00000569899 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
GDE1-205ENST00000569899 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
GDE1-205ENST00000569899 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
GDE1-205ENST00000569899 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
GDE1-205ENST00000569899 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
GDE1-205ENST00000569899 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
GDE1-205ENST00000569899 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
GDE1-205ENST00000569899 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
GDE1-205ENST00000569899 EXOC5O00471 708 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
GDE1-205ENST00000569899 DDB1Q16531 1140 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 TNNQ9UQP3 1299 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 KCPQ6ZWJ8 1503 aa12.81□□□□□ -0.36
GDE1-205ENST00000569899 CABP4P57796 275 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 BRWD3Q6RI45 1802 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
GDE1-205ENST00000569899 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 SLC24A3Q9HC58 644 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 ZNF687Q8N1G0 1237 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
GDE1-205ENST00000569899 CRBNQ96SW2 442 aa12.8□□□□□ -0.36
GDE1-205ENST00000569899 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
GDE1-205ENST00000569899 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
GDE1-205ENST00000569899 PPP1R3GB7ZBB8 358 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms