RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 GLTPD2A6NH11 291 aa16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 DNAJC5GQ8N7S2 189 aa16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
RBFOX1-218ENST00000569889 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 FSTL1Q12841 308 aa16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 SMC1BQ8NDV3 1235 aa16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 CNKSR1Q969H4 720 aa16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 TNRC6CQ9HCJ0 1690 aaKnown RBP16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
RBFOX1-218ENST00000569889 WDR90Q96KV7 1748 aa16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 HLFQ16534 295 aa16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 BCORQ6W2J9 1755 aa16.31■□□□□ 0.2
RBFOX1-218ENST00000569889 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
RBFOX1-218ENST00000569889 SRGNP10124 158 aa16.3■□□□□ 0.2
RBFOX1-218ENST00000569889 MYL6BP14649 208 aa16.3■□□□□ 0.2
RBFOX1-218ENST00000569889 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
RBFOX1-218ENST00000569889 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
RBFOX1-218ENST00000569889 MAPK8IP3Q9UPT6 1336 aa16.29■□□□□ 0.2
RBFOX1-218ENST00000569889 TPTE2Q6XPS3 522 aa16.29■□□□□ 0.2
RBFOX1-218ENST00000569889 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-218ENST00000569889 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
RBFOX1-218ENST00000569889 DDNO94850 711 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-218ENST00000569889 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
RBFOX1-218ENST00000569889 GPTP24298 496 aa16.27■□□□□ 0.2
RBFOX1-218ENST00000569889 NFE2L2Q16236 605 aa16.27■□□□□ 0.2
RBFOX1-218ENST00000569889 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
RBFOX1-218ENST00000569889 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 NPR1P16066 1061 aa16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 PNISRQ8TF01 805 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 KLRG1Q96E93 195 aa16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
RBFOX1-218ENST00000569889 POTECB2RU33 542 aa16.25■□□□□ 0.19
RBFOX1-218ENST00000569889 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
RBFOX1-218ENST00000569889 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
RBFOX1-218ENST00000569889 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
RBFOX1-218ENST00000569889 NUP98P52948 1817 aa16.24■□□□□ 0.19
RBFOX1-218ENST00000569889 EIF4A1P60842 406 aaKnown RBP16.24■□□□□ 0.19
RBFOX1-218ENST00000569889 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
RBFOX1-218ENST00000569889 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
RBFOX1-218ENST00000569889 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
RBFOX1-218ENST00000569889 PLEKHF1Q96S99 279 aa16.24■□□□□ 0.19
RBFOX1-218ENST00000569889 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
RBFOX1-218ENST00000569889 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
RBFOX1-218ENST00000569889 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
RBFOX1-218ENST00000569889 POTEIP0CG38 1075 aa16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 RIPK4P57078 832 aa16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 LAMB4A4D0S4 1761 aa16.22■□□□□ 0.19
RBFOX1-218ENST00000569889 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 ANXA1P04083 346 aa16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 EAPPQ56P03 285 aaPredicted RBP16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
RBFOX1-218ENST00000569889 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 COL13A1Q5TAT6 717 aaPredicted RBP16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 C7orf43Q8WVR3 580 aa16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
RBFOX1-218ENST00000569889 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
RBFOX1-218ENST00000569889 ABCC12Q96J65 1359 aa16.19■□□□□ 0.18
RBFOX1-218ENST00000569889 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-218ENST00000569889 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
RBFOX1-218ENST00000569889 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
RBFOX1-218ENST00000569889 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
RBFOX1-218ENST00000569889 CAPN15O75808 1086 aa16.18■□□□□ 0.18
RBFOX1-218ENST00000569889 RTKN2Q8IZC4 609 aa16.18■□□□□ 0.18
RBFOX1-218ENST00000569889 MKRN1Q9UHC7 482 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-218ENST00000569889 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
RBFOX1-218ENST00000569889 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
RBFOX1-218ENST00000569889 KLRG2A4D1S0 409 aaPredicted RBP16.16■□□□□ 0.18
RBFOX1-218ENST00000569889 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
RBFOX1-218ENST00000569889 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
RBFOX1-218ENST00000569889 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
RBFOX1-218ENST00000569889 IQCA1LA6NCM1 817 aa16.15■□□□□ 0.18
RBFOX1-218ENST00000569889 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-218ENST00000569889 RALBP1Q15311 655 aa16.15■□□□□ 0.18
RBFOX1-218ENST00000569889 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
RBFOX1-218ENST00000569889 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms