RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-223ENST00000569784 COL15A1P39059 1388 aa11.39□□□□□ -0.59
SCAPER-223ENST00000569784 CYP19A1P11511 503 aaPredicted RBP11.38□□□□□ -0.59
SCAPER-223ENST00000569784 SOS1Q07889 1333 aaPredicted RBP11.37□□□□□ -0.59
SCAPER-223ENST00000569784 BTBD11A6QL63 1104 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 STK25O00506 426 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 NARFQ9UHQ1 456 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
SCAPER-223ENST00000569784 CHRNA5P30532 468 aa11.36□□□□□ -0.59
SCAPER-223ENST00000569784 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
SCAPER-223ENST00000569784 MRC1P22897 1456 aa11.36□□□□□ -0.59
SCAPER-223ENST00000569784 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 H0YIN7 160 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
SCAPER-223ENST00000569784 SERPINB2P05120 415 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 DDR1Q08345 913 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 C9orf131Q5VYM1 1079 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
SCAPER-223ENST00000569784 ADCY9O60503 1353 aa11.34□□□□□ -0.59
SCAPER-223ENST00000569784 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
SCAPER-223ENST00000569784 TM4SF1P30408 202 aa11.34□□□□□ -0.59
SCAPER-223ENST00000569784 NFIXQ14938 502 aa11.34□□□□□ -0.59
SCAPER-223ENST00000569784 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
SCAPER-223ENST00000569784 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
SCAPER-223ENST00000569784 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCAPER-223ENST00000569784 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
SCAPER-223ENST00000569784 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.59
SCAPER-223ENST00000569784 AFDNP55196 1824 aaKnown RBP11.33□□□□□ -0.6
SCAPER-223ENST00000569784 HSPA6P17066 643 aa11.33□□□□□ -0.6
SCAPER-223ENST00000569784 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
SCAPER-223ENST00000569784 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
SCAPER-223ENST00000569784 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
SCAPER-223ENST00000569784 TBC1D2BQ9UPU7 963 aa11.33□□□□□ -0.6
SCAPER-223ENST00000569784 PPP2R1AP30153 589 aa11.32□□□□□ -0.6
SCAPER-223ENST00000569784 ST5P78524 1137 aa11.32□□□□□ -0.6
SCAPER-223ENST00000569784 TTLL6Q8N841 843 aa11.32□□□□□ -0.6
SCAPER-223ENST00000569784 SETDB2Q96T68 719 aa11.32□□□□□ -0.6
SCAPER-223ENST00000569784 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
SCAPER-223ENST00000569784 ADAMTS7Q9UKP4 1686 aa11.32□□□□□ -0.6
SCAPER-223ENST00000569784 COL3A1P02461 1466 aaPredicted RBP11.32□□□□□ -0.6
SCAPER-223ENST00000569784 TOMM70O94826 608 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 A1BGP04217 495 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 KCNA3P22001 575 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 PDE6BP35913 854 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
SCAPER-223ENST00000569784 MCM10Q7L590 875 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
SCAPER-223ENST00000569784 EFCAB3Q8N7B9 438 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 ZNF652Q9Y2D9 606 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
SCAPER-223ENST00000569784 KIF3CO14782 793 aa11.3□□□□□ -0.6
SCAPER-223ENST00000569784 SNRPA1P09661 255 aaKnown RBP11.3□□□□□ -0.6
SCAPER-223ENST00000569784 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
SCAPER-223ENST00000569784 EIF5P55010 431 aaKnown RBP11.3□□□□□ -0.6
SCAPER-223ENST00000569784 TBC1D9BQ66K14 1250 aa11.3□□□□□ -0.6
SCAPER-223ENST00000569784 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
SCAPER-223ENST00000569784 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
SCAPER-223ENST00000569784 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
SCAPER-223ENST00000569784 SIPA1L3O60292 1781 aaPredicted RBP11.3□□□□□ -0.6
SCAPER-223ENST00000569784 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
SCAPER-223ENST00000569784 UTRNP46939 3433 aa11.29□□□□□ -0.6
SCAPER-223ENST00000569784 APLP1P51693 650 aa11.29□□□□□ -0.6
SCAPER-223ENST00000569784 RASSF7Q02833 373 aa11.29□□□□□ -0.6
SCAPER-223ENST00000569784 CACNA1SQ13698 1873 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 LMNB1P20700 586 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 PIP4K2AP48426 406 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-223ENST00000569784 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 NBPF5PQ86XG9 351 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-223ENST00000569784 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
SCAPER-223ENST00000569784 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.6
SCAPER-223ENST00000569784 SCN7AQ01118 1682 aa11.27□□□□□ -0.6
SCAPER-223ENST00000569784 DLEC1Q9Y238 1755 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 KCNQ3O43525 872 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
SCAPER-223ENST00000569784 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
SCAPER-223ENST00000569784 NGEFQ8N5V2 710 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
SCAPER-223ENST00000569784 BRIP1Q9BX63 1249 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
SCAPER-223ENST00000569784 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
SCAPER-223ENST00000569784 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
SCAPER-223ENST00000569784 SBF1O95248 1867 aa11.26□□□□□ -0.61
SCAPER-223ENST00000569784 C21orf2O43822 256 aa11.26□□□□□ -0.61
SCAPER-223ENST00000569784 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
SCAPER-223ENST00000569784 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms