RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CLEC11AQ9Y240 323 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 C3P01024 1663 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 TTC30BQ8N4P2 665 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 MS4A1P11836 297 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 EN1Q05925 392 aaPredicted RBP8.11□□□□□ -1.11
SMG1-217ENST00000569764 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
SMG1-217ENST00000569764 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 WDR17Q8IZU2 1322 aa8.1□□□□□ -1.11
SMG1-217ENST00000569764 IP6K1Q92551 441 aa8.1□□□□□ -1.11
SMG1-217ENST00000569764 CCDC146Q8IYE0 955 aa8.1□□□□□ -1.11
SMG1-217ENST00000569764 MPRIPQ6WCQ1 1025 aa8.1□□□□□ -1.11
SMG1-217ENST00000569764 MAP3K5Q99683 1374 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 TCERG1O14776 1098 aaKnown RBP8.09□□□□□ -1.11
SMG1-217ENST00000569764 PDILTQ8N807 584 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 IGSF5Q9NSI5 407 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 U2AF1L5P0DN76 240 aaPredicted RBP8.09□□□□□ -1.11
SMG1-217ENST00000569764 U2AF1Q01081 240 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG1-217ENST00000569764 C11orf96Q7Z7L8 435 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 NYXQ9GZU5 481 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 A0A1W2PP64 1363 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 RNF123Q5XPI4 1314 aa8.09□□□□□ -1.11
SMG1-217ENST00000569764 MAGEC2Q9UBF1 373 aaPredicted RBP8.09□□□□□ -1.11
SMG1-217ENST00000569764 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
SMG1-217ENST00000569764 NPC1L1Q9UHC9 1359 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 PSDA5PKW4 1024 aaPredicted RBP8.08□□□□□ -1.12
SMG1-217ENST00000569764 ERICH4A6NGS2 130 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 A6NJR5 290 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 H0YIN7 160 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 USP5P45974 858 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 MRVI1Q9Y6F6 885 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 CCDC194A0A1B0GVG4 234 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 FCHSD2O94868 740 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
SMG1-217ENST00000569764 PDE4DQ08499 809 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 NBPF9Q3BBW0 867 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 C9orf131Q5VYM1 1079 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
SMG1-217ENST00000569764 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 UBA5Q9GZZ9 404 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 DYTNA2CJ06 578 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 LMNB1P20700 586 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 NAALADL2Q58DX5 795 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 TSPAN18Q96SJ8 248 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 SPATA31A5Q5VU36 1347 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 SPATA31A7Q8IWB4 1347 aa8.08□□□□□ -1.12
SMG1-217ENST00000569764 KCNJ4P48050 445 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 POLA2Q14181 598 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 RBM46Q8TBY0 533 aaKnown RBP8.07□□□□□ -1.12
SMG1-217ENST00000569764 NSD2O96028 1365 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 PLSCR1O15162 318 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 ATP6V1AP38606 617 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 IGBP1P78318 339 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 ENOX2Q16206 610 aaKnown RBP8.07□□□□□ -1.12
SMG1-217ENST00000569764 RPGRQ92834 1020 aaKnown RBP8.07□□□□□ -1.12
SMG1-217ENST00000569764 PRDM4Q9UKN5 801 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 KIAA0232Q92628 1395 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 ARHGAP27Q6ZUM4 889 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 SND1Q7KZF4 910 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMG1-217ENST00000569764 HELBQ8NG08 1087 aaPredicted RBP8.07□□□□□ -1.12
SMG1-217ENST00000569764 NOL10Q9BSC4 688 aaKnown RBP8.07□□□□□ -1.12
SMG1-217ENST00000569764 CHPF2Q9P2E5 772 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.07□□□□□ -1.12
SMG1-217ENST00000569764 ZNF521Q96K83 1311 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 USP32Q8NFA0 1604 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 CEP120Q8N960 986 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 ACSBG1Q96GR2 724 aa8.07□□□□□ -1.12
SMG1-217ENST00000569764 ADAMTS13Q76LX8 1427 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 PSEN1P49768 467 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 TXNRD1Q16881 649 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 GIPC2Q8TF65 315 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 UBXN4Q92575 508 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 TMEM51Q9NW97 253 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 AATKQ6ZMQ8 1374 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 BIRC2Q13490 618 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 DDX46Q7L014 1031 aaKnown RBP8.06□□□□□ -1.12
SMG1-217ENST00000569764 SDR16C5Q8N3Y7 309 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 PTPRUQ92729 1446 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.06□□□□□ -1.12
SMG1-217ENST00000569764 PES1O00541 588 aaKnown RBP8.06□□□□□ -1.12
SMG1-217ENST00000569764 PLIN1O60240 522 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 NAP1L1P55209 391 aaKnown RBP8.06□□□□□ -1.12
SMG1-217ENST00000569764 ZRSR2Q15696 482 aaKnown RBP8.06□□□□□ -1.12
SMG1-217ENST00000569764 FAN1Q9Y2M0 1017 aa8.06□□□□□ -1.12
SMG1-217ENST00000569764 FRAT2O75474 233 aaPredicted RBP8.05□□□□□ -1.12
SMG1-217ENST00000569764 GGNBP2Q9H3C7 697 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 TMOD2Q9NZR1 351 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 PUF60Q9UHX1 559 aaKnown RBP8.05□□□□□ -1.12
SMG1-217ENST00000569764 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 ROBO2Q9HCK4 1378 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 STK25O00506 426 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 SETDB2Q96T68 719 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 LRRC27Q9C0I9 530 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 SMC4Q9NTJ3 1288 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 PRR12Q9ULL5 1215 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 BCS1LQ9Y276 419 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms