RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 KSR2Q6VAB6 950 aa12.88□□□□□ -0.35
LINC01654-201ENST00000569711 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
LINC01654-201ENST00000569711 RPAP1Q9BWH6 1393 aaPredicted RBP12.88□□□□□ -0.35
LINC01654-201ENST00000569711 UTYO14607 1347 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
LINC01654-201ENST00000569711 UBE2HP62256 183 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
LINC01654-201ENST00000569711 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 SLIT3O75094 1523 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 PLEKHG2Q9H7P9 1386 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
LINC01654-201ENST00000569711 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
LINC01654-201ENST00000569711 STX6O43752 255 aa12.86□□□□□ -0.35
LINC01654-201ENST00000569711 HSP90AA2PQ14568 343 aaPredicted RBP12.86□□□□□ -0.35
LINC01654-201ENST00000569711 LGR6Q9HBX8 967 aa12.86□□□□□ -0.35
LINC01654-201ENST00000569711 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
LINC01654-201ENST00000569711 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
LINC01654-201ENST00000569711 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
LINC01654-201ENST00000569711 ZKSCAN1P17029 563 aaPredicted RBP12.86□□□□□ -0.35
LINC01654-201ENST00000569711 AK2P54819 239 aa12.86□□□□□ -0.35
LINC01654-201ENST00000569711 PSME1Q06323 249 aa12.86□□□□□ -0.35
LINC01654-201ENST00000569711 USHBP1Q8N6Y0 703 aa12.86□□□□□ -0.35
LINC01654-201ENST00000569711 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
LINC01654-201ENST00000569711 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 IL25Q9H293 177 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 CYP46A1Q9Y6A2 500 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 ADAMTS7Q9UKP4 1686 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
LINC01654-201ENST00000569711 PSMA5P28066 241 aa12.85□□□□□ -0.35
LINC01654-201ENST00000569711 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
LINC01654-201ENST00000569711 CWC27Q6UX04 472 aaKnown RBP12.85□□□□□ -0.35
LINC01654-201ENST00000569711 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
LINC01654-201ENST00000569711 F13A1P00488 732 aa12.84□□□□□ -0.35
LINC01654-201ENST00000569711 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
LINC01654-201ENST00000569711 RUFY3Q7L099 469 aa12.84□□□□□ -0.35
LINC01654-201ENST00000569711 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
LINC01654-201ENST00000569711 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
LINC01654-201ENST00000569711 SYT1P21579 422 aa12.84□□□□□ -0.35
LINC01654-201ENST00000569711 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
LINC01654-201ENST00000569711 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
LINC01654-201ENST00000569711 CASTP20810 708 aaKnown RBP12.83□□□□□ -0.36
LINC01654-201ENST00000569711 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
LINC01654-201ENST00000569711 PDRG1Q9NUG6 133 aa12.83□□□□□ -0.36
LINC01654-201ENST00000569711 SIPA1L3O60292 1781 aaPredicted RBP12.83□□□□□ -0.36
LINC01654-201ENST00000569711 MST1RQ04912 1400 aa12.83□□□□□ -0.36
LINC01654-201ENST00000569711 MAP4K4O95819 1239 aaPredicted RBP12.83□□□□□ -0.36
LINC01654-201ENST00000569711 PDCP20941 246 aa12.83□□□□□ -0.36
LINC01654-201ENST00000569711 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
LINC01654-201ENST00000569711 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
LINC01654-201ENST00000569711 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC01654-201ENST00000569711 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
LINC01654-201ENST00000569711 CCDC171Q6TFL3 1326 aa12.82□□□□□ -0.36
LINC01654-201ENST00000569711 GRM8O00222 908 aa12.82□□□□□ -0.36
LINC01654-201ENST00000569711 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
LINC01654-201ENST00000569711 MAP7D2Q96T17 732 aa12.82□□□□□ -0.36
LINC01654-201ENST00000569711 ABCC6O95255 1503 aa12.82□□□□□ -0.36
LINC01654-201ENST00000569711 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC01654-201ENST00000569711 MRC1P22897 1456 aa12.82□□□□□ -0.36
LINC01654-201ENST00000569711 GADD45BO75293 160 aaPredicted RBP12.81□□□□□ -0.36
LINC01654-201ENST00000569711 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 KCNQ3O43525 872 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 GCP02774 474 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
LINC01654-201ENST00000569711 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
LINC01654-201ENST00000569711 TICAM2Q86XR7 235 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
LINC01654-201ENST00000569711 PDCL3Q9H2J4 239 aa12.81□□□□□ -0.36
LINC01654-201ENST00000569711 TPM3P06753 285 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 AACSQ86V21 672 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 COL15A1P39059 1388 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 GJB2P29033 226 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
LINC01654-201ENST00000569711 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
LINC01654-201ENST00000569711 ELP1O95163 1332 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 PRPF40BQ6NWY9 871 aaKnown RBP12.79□□□□□ -0.36
LINC01654-201ENST00000569711 RNF214Q8ND24 703 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 MTMR6Q9Y217 621 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 PXDNQ92626 1479 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 JCADQ9P266 1359 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 PTH1RQ03431 593 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
LINC01654-201ENST00000569711 KRT32Q14532 448 aa12.78□□□□□ -0.36
LINC01654-201ENST00000569711 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
LINC01654-201ENST00000569711 KCNJ4P48050 445 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms