RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 EIF2S2P20042 333 aaKnown RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 MFAP1P55081 439 aaKnown RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 MTX1Q13505 466 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 MFSD10Q14728 455 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 RBM26Q5T8P6 1007 aaKnown RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 ZNF790Q6PG37 636 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 PI4KAP1Q8N8J0 262 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 NECTIN2Q92692 538 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 KIF2CQ99661 725 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 DDX21Q9NR30 783 aaKnown RBP eCLIP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 CHPF2Q9P2E5 772 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 ARIH1Q9Y4X5 557 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 UTYO14607 1347 aa6.65□□□□□ -1.35
SF3B3-213ENST00000569687 SALL3Q9BXA9 1300 aa6.65□□□□□ -1.35
SF3B3-213ENST00000569687 PHLPP1O60346 1717 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 KDM3BQ7LBC6 1761 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 CYP27B1O15528 508 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 SDSP20132 328 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 PDE1AP54750 535 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 PDIA6Q15084 440 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 NFKBIBQ15653 356 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 HSP90AB4PQ58FF6 505 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 IFNL1Q8IU54 200 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 KRI1Q8N9T8 703 aaKnown RBP6.64□□□□□ -1.35
SF3B3-213ENST00000569687 USP26Q9BXU7 913 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 LRRCC1Q9C099 1032 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 KDM4CQ9H3R0 1056 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 FARP1Q9Y4F1 1045 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-213ENST00000569687 LRRFIP2Q9Y608 721 aaKnown RBP6.64□□□□□ -1.35
SF3B3-213ENST00000569687 AOX1Q06278 1338 aa6.64□□□□□ -1.35
SF3B3-213ENST00000569687 PNMA6EA0A0J9YXQ4 647 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 ERVV-2B6SEH9 535 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 UBAP1LF5GYI3 381 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 EPB41L2O43491 1005 aaKnown RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 SMARCA5O60264 1052 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 ADCY9O60503 1353 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 DDX58O95786 925 aaKnown RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 RGPD2P0DJD1 1756 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 CSB-PGBD3P0DP91 1061 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 PIP4K2BP78356 416 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 CHRNA2Q15822 529 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 RTL5Q5HYW3 569 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 LARP1Q6PKG0 1096 aaKnown RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 PPP1R42Q7Z4L9 355 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 GPIHBP1Q8IV16 184 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 WDR17Q8IZU2 1322 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 NFATC2IPQ8NCF5 419 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 LINS1Q8NG48 757 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 CERKQ8TCT0 537 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 OTUD7AQ8TE49 926 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 DDX27Q96GQ7 796 aaKnown RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 CARD10Q9BWT7 1032 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 CRISPLD2Q9H0B8 497 aa6.63□□□□□ -1.35
SF3B3-213ENST00000569687 FAM208AQ9UK61 1670 aaKnown RBP6.63□□□□□ -1.35
SF3B3-213ENST00000569687 RGPD5Q99666 1765 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 COL5A2P05997 1499 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-213ENST00000569687 KDM6AO15550 1401 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-213ENST00000569687 SNRPA1P09661 255 aaKnown RBP6.62□□□□□ -1.35
SF3B3-213ENST00000569687 NBPF7P0C2Y1 421 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-213ENST00000569687 MLLT3P42568 568 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-213ENST00000569687 CAMK2BQ13554 666 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 PROSER3Q2NL68 480 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 CASC1Q6TDU7 716 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 LRP10Q7Z4F1 713 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 ZCRB1Q8TBF4 217 aaKnown RBP6.62□□□□□ -1.35
SF3B3-213ENST00000569687 KIF1BPQ96EK5 621 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 IL17RAQ96F46 866 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 PRDM11Q9NQV5 511 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 MAP3K2Q9Y2U5 619 aa6.62□□□□□ -1.35
SF3B3-213ENST00000569687 MEGF6O75095 1541 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 ERBB4Q15303 1308 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 USP42Q9H9J4 1324 aaKnown RBP6.61□□□□□ -1.35
SF3B3-213ENST00000569687 TRIM66O15016 1216 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 SURF6O75683 361 aaKnown RBP6.61□□□□□ -1.35
SF3B3-213ENST00000569687 REC8O95072 547 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 MX1P20591 662 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 DDIT3P35638 169 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 CABP4P57796 275 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 RABEP1Q15276 862 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 ZNF496Q96IT1 587 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-213ENST00000569687 FMNL2Q96PY5 1086 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 METTL22Q9BUU2 404 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-213ENST00000569687 EXOC6BQ9Y2D4 811 aa6.61□□□□□ -1.35
SF3B3-213ENST00000569687 SIPA1L3O60292 1781 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-213ENST00000569687 N4BP2Q86UW6 1770 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-213ENST00000569687 MRC1P22897 1456 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 COL15A1P39059 1388 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 COL14A1Q05707 1796 aaKnown RBP6.6□□□□□ -1.35
SF3B3-213ENST00000569687 PRAMEF22A3QJZ6 481 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 GRM8O00222 908 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 ERC2O15083 957 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 ANXA1P04083 346 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 IGKV5-2P06315 115 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 SLC39A6Q13433 755 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 ANKRD13DQ6ZTN6 518 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 ERC1Q8IUD2 1116 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 HSCBQ8IWL3 235 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 RHPN1Q8TCX5 695 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 MS4A4AQ96JQ5 239 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms