RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 FKBP5Q13451 457 aaPredicted RBP29.87■■■□□ 2.37
RAB40C-212ENST00000569575 HSP90AB3PQ58FF7 597 aa29.87■■■□□ 2.37
RAB40C-212ENST00000569575 BCL2L13Q9BXK5 485 aa29.86■■■□□ 2.37
RAB40C-212ENST00000569575 PNPLA7Q6ZV29 1317 aa29.86■■■□□ 2.37
RAB40C-212ENST00000569575 AIMP1Q12904 312 aaKnown RBP29.85■■■□□ 2.37
RAB40C-212ENST00000569575 ZKSCAN2Q63HK3 967 aa29.85■■■□□ 2.37
RAB40C-212ENST00000569575 G2E3Q7L622 706 aa29.85■■■□□ 2.37
RAB40C-212ENST00000569575 NOB1Q9ULX3 412 aaKnown RBP29.85■■■□□ 2.37
RAB40C-212ENST00000569575 USP42Q9H9J4 1324 aaKnown RBP29.85■■■□□ 2.37
RAB40C-212ENST00000569575 RIC3Q7Z5B4 369 aa29.84■■■□□ 2.37
RAB40C-212ENST00000569575 PHF14O94880 888 aa29.83■■■□□ 2.37
RAB40C-212ENST00000569575 CAMTA2O94983 1202 aa29.83■■■□□ 2.37
RAB40C-212ENST00000569575 GIGYF2Q6Y7W6 1299 aaKnown RBP29.83■■■□□ 2.37
RAB40C-212ENST00000569575 TTLL7Q6ZT98 887 aa29.83■■■□□ 2.37
RAB40C-212ENST00000569575 COL23A1Q86Y22 540 aaPredicted RBP29.83■■■□□ 2.37
RAB40C-212ENST00000569575 ARXQ96QS3 562 aa29.83■■■□□ 2.37
RAB40C-212ENST00000569575 TBC1D2BQ9UPU7 963 aa29.83■■■□□ 2.37
RAB40C-212ENST00000569575 ATF7IPQ6VMQ6 1270 aa29.82■■■□□ 2.36
RAB40C-212ENST00000569575 TUBGCP6Q96RT7 1819 aa29.82■■■□□ 2.36
RAB40C-212ENST00000569575 PI4KAP2A4QPH2 592 aa29.81■■■□□ 2.36
RAB40C-212ENST00000569575 NLGN1Q8N2Q7 840 aa29.81■■■□□ 2.36
RAB40C-212ENST00000569575 PI4KAP1Q8N8J0 262 aa29.81■■■□□ 2.36
RAB40C-212ENST00000569575 C4AP0C0L4 1744 aa29.81■■■□□ 2.36
RAB40C-212ENST00000569575 IBTKQ9P2D0 1353 aaPredicted RBP29.8■■■□□ 2.36
RAB40C-212ENST00000569575 NEXNQ0ZGT2 675 aa29.8■■■□□ 2.36
RAB40C-212ENST00000569575 AMIGO3Q86WK7 504 aa29.8■■■□□ 2.36
RAB40C-212ENST00000569575 DNAAF4Q8WXU2 420 aa29.8■■■□□ 2.36
RAB40C-212ENST00000569575 FRAT1Q92837 279 aaPredicted RBP29.79■■■□□ 2.36
RAB40C-212ENST00000569575 METTL22Q9BUU2 404 aaPredicted RBP29.79■■■□□ 2.36
RAB40C-212ENST00000569575 BCORQ6W2J9 1755 aa29.79■■■□□ 2.36
RAB40C-212ENST00000569575 TRIM28Q13263 835 aaKnown RBP29.78■■■□□ 2.36
RAB40C-212ENST00000569575 MAP3K2Q9Y2U5 619 aa29.78■■■□□ 2.36
RAB40C-212ENST00000569575 SCN7AQ01118 1682 aa29.78■■■□□ 2.36
RAB40C-212ENST00000569575 PXDNLA1KZ92 1463 aa29.77■■■□□ 2.36
RAB40C-212ENST00000569575 TCIRG1Q13488 830 aa29.77■■■□□ 2.36
RAB40C-212ENST00000569575 ADCY9O60503 1353 aa29.77■■■□□ 2.36
RAB40C-212ENST00000569575 RNF123Q5XPI4 1314 aa29.76■■■□□ 2.36
RAB40C-212ENST00000569575 PDE3AQ14432 1141 aa29.76■■■□□ 2.35
RAB40C-212ENST00000569575 USPL1Q5W0Q7 1092 aa29.76■■■□□ 2.35
RAB40C-212ENST00000569575 ZBTB3Q9H5J0 574 aa29.76■■■□□ 2.35
RAB40C-212ENST00000569575 ATP10DQ9P241 1426 aa29.76■■■□□ 2.35
RAB40C-212ENST00000569575 NUP98P52948 1817 aa29.75■■■□□ 2.35
RAB40C-212ENST00000569575 MSH5O43196 834 aa29.75■■■□□ 2.35
RAB40C-212ENST00000569575 GYS1P13807 737 aa29.75■■■□□ 2.35
RAB40C-212ENST00000569575 ARFGEF2Q9Y6D5 1785 aa29.75■■■□□ 2.35
RAB40C-212ENST00000569575 TRIM27P14373 513 aa29.74■■■□□ 2.35
RAB40C-212ENST00000569575 CCT4P50991 539 aaKnown RBP29.74■■■□□ 2.35
RAB40C-212ENST00000569575 PARP10Q53GL7 1025 aa29.74■■■□□ 2.35
RAB40C-212ENST00000569575 LINS1Q8NG48 757 aa29.74■■■□□ 2.35
RAB40C-212ENST00000569575 ALDH1L1O75891 902 aa29.72■■■□□ 2.35
RAB40C-212ENST00000569575 RRP1P56182 461 aaKnown RBP29.72■■■□□ 2.35
RAB40C-212ENST00000569575 R3HDM1Q15032 1099 aaKnown RBP29.72■■■□□ 2.35
RAB40C-212ENST00000569575 DZIP1LQ8IYY4 767 aaKnown RBP29.72■■■□□ 2.35
RAB40C-212ENST00000569575 ZNF34Q8IZ26 560 aa29.72■■■□□ 2.35
RAB40C-212ENST00000569575 CCDC191Q8NCU4 936 aa29.72■■■□□ 2.35
RAB40C-212ENST00000569575 BCL2L12Q9HB09 334 aa29.72■■■□□ 2.35
RAB40C-212ENST00000569575 SRP68Q9UHB9 627 aaKnown RBP29.72■■■□□ 2.35
RAB40C-212ENST00000569575 ABCC4O15439 1325 aa29.71■■■□□ 2.35
RAB40C-212ENST00000569575 HLFQ16534 295 aa29.71■■■□□ 2.35
RAB40C-212ENST00000569575 FTSJ3Q8IY81 847 aaKnown RBP29.71■■■□□ 2.35
RAB40C-212ENST00000569575 ISCA1Q9BUE6 129 aa29.71■■■□□ 2.35
RAB40C-212ENST00000569575 INTS3Q68E01 1043 aaKnown RBP29.7■■■□□ 2.35
RAB40C-212ENST00000569575 SETDB2Q96T68 719 aa29.7■■■□□ 2.35
RAB40C-212ENST00000569575 ANKRD36CQ5JPF3 1778 aa29.69■■■□□ 2.34
RAB40C-212ENST00000569575 BEND3Q5T5X7 828 aa29.69■■■□□ 2.34
RAB40C-212ENST00000569575 SMIM5Q71RC9 77 aa29.69■■■□□ 2.34
RAB40C-212ENST00000569575 SRCIN1Q9C0H9 1055 aa29.69■■■□□ 2.34
RAB40C-212ENST00000569575 CHMP4BQ9H444 224 aaKnown RBP29.69■■■□□ 2.34
RAB40C-212ENST00000569575 CASZ1Q86V15 1759 aa29.68■■■□□ 2.34
RAB40C-212ENST00000569575 F6X3S4 739 aa29.68■■■□□ 2.34
RAB40C-212ENST00000569575 MYD88Q99836 296 aa29.68■■■□□ 2.34
RAB40C-212ENST00000569575 MTFR1LQ9H019 292 aa29.68■■■□□ 2.34
RAB40C-212ENST00000569575 TM4SF1P30408 202 aa29.67■■■□□ 2.34
RAB40C-212ENST00000569575 FKBP8Q14318 412 aa29.67■■■□□ 2.34
RAB40C-212ENST00000569575 SLC4A10Q6U841 1118 aa29.67■■■□□ 2.34
RAB40C-212ENST00000569575 NIP7Q9Y221 180 aaKnown RBP eCLIP29.67■■■□□ 2.34
RAB40C-212ENST00000569575 PPP1R42Q7Z4L9 355 aa29.66■■■□□ 2.34
RAB40C-212ENST00000569575 NYXQ9GZU5 481 aa29.66■■■□□ 2.34
RAB40C-212ENST00000569575 HDAC5Q9UQL6 1122 aa29.66■■■□□ 2.34
RAB40C-212ENST00000569575 SUPT16HQ9Y5B9 1047 aaKnown RBP29.66■■■□□ 2.34
RAB40C-212ENST00000569575 N4BP2Q86UW6 1770 aaPredicted RBP29.66■■■□□ 2.34
RAB40C-212ENST00000569575 CARMIL3Q8ND23 1372 aa29.65■■■□□ 2.34
RAB40C-212ENST00000569575 HSP90B1P14625 803 aaKnown RBP29.65■■■□□ 2.34
RAB40C-212ENST00000569575 CWC25Q9NXE8 425 aaPredicted RBP29.65■■■□□ 2.34
RAB40C-212ENST00000569575 NEURL1BA8MQ27 555 aa29.64■■■□□ 2.34
RAB40C-212ENST00000569575 TBC1D9BQ66K14 1250 aa29.64■■■□□ 2.34
RAB40C-212ENST00000569575 NLRP10Q86W26 655 aa29.64■■■□□ 2.34
RAB40C-212ENST00000569575 IGKV5-2P06315 115 aa29.63■■■□□ 2.33
RAB40C-212ENST00000569575 NFIXQ14938 502 aa29.63■■■□□ 2.33
RAB40C-212ENST00000569575 COL24A1Q17RW2 1714 aa29.62■■■□□ 2.33
RAB40C-212ENST00000569575 TPTE2Q6XPS3 522 aa29.62■■■□□ 2.33
RAB40C-212ENST00000569575 GCKRQ14397 625 aa29.61■■■□□ 2.33
RAB40C-212ENST00000569575 CLUAP1Q96AJ1 413 aa29.61■■■□□ 2.33
RAB40C-212ENST00000569575 PLIN1O60240 522 aa29.6■■■□□ 2.33
RAB40C-212ENST00000569575 UTP14AQ9BVJ6 771 aaKnown RBP29.6■■■□□ 2.33
RAB40C-212ENST00000569575 PARP3Q9Y6F1 533 aa29.6■■■□□ 2.33
RAB40C-212ENST00000569575 ATP5J2-PTCD1G3V325 749 aa29.59■■■□□ 2.33
RAB40C-212ENST00000569575 GPTP24298 496 aa29.59■■■□□ 2.33
RAB40C-212ENST00000569575 POLD1P28340 1107 aa29.59■■■□□ 2.33
RAB40C-212ENST00000569575 DDX19BQ9UMR2 479 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms