RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 EIF4A2Q14240 407 aaKnown RBP12.58□□□□□ -0.4
TCF4-243ENST00000569357 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
TCF4-243ENST00000569357 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
TCF4-243ENST00000569357 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
TCF4-243ENST00000569357 SOS1Q07889 1333 aaPredicted RBP12.58□□□□□ -0.4
TCF4-243ENST00000569357 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
TCF4-243ENST00000569357 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
TCF4-243ENST00000569357 CNTROBQ8N137 903 aa12.57□□□□□ -0.4
TCF4-243ENST00000569357 NPHP1O15259 732 aa12.56□□□□□ -0.4
TCF4-243ENST00000569357 PDE6BP35913 854 aa12.56□□□□□ -0.4
TCF4-243ENST00000569357 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
TCF4-243ENST00000569357 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
TCF4-243ENST00000569357 COL15A1P39059 1388 aa12.56□□□□□ -0.4
TCF4-243ENST00000569357 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
TCF4-243ENST00000569357 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
TCF4-243ENST00000569357 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
TCF4-243ENST00000569357 POLKQ9UBT6 870 aa12.55□□□□□ -0.4
TCF4-243ENST00000569357 ZBTB1Q9Y2K1 713 aa12.55□□□□□ -0.4
TCF4-243ENST00000569357 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
TCF4-243ENST00000569357 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
TCF4-243ENST00000569357 EPHX2P34913 555 aa12.54□□□□□ -0.4
TCF4-243ENST00000569357 ECE1P42892 770 aa12.54□□□□□ -0.4
TCF4-243ENST00000569357 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
TCF4-243ENST00000569357 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
TCF4-243ENST00000569357 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
TCF4-243ENST00000569357 MCOLN1Q9GZU1 580 aa12.54□□□□□ -0.4
TCF4-243ENST00000569357 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
TCF4-243ENST00000569357 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
TCF4-243ENST00000569357 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
TCF4-243ENST00000569357 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
TCF4-243ENST00000569357 CYP4F22Q6NT55 531 aa12.53□□□□□ -0.4
TCF4-243ENST00000569357 PNMA8AQ86V59 439 aaPredicted RBP12.53□□□□□ -0.4
TCF4-243ENST00000569357 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
TCF4-243ENST00000569357 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
TCF4-243ENST00000569357 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
TCF4-243ENST00000569357 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
TCF4-243ENST00000569357 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
TCF4-243ENST00000569357 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
TCF4-243ENST00000569357 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
TCF4-243ENST00000569357 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
TCF4-243ENST00000569357 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
TCF4-243ENST00000569357 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
TCF4-243ENST00000569357 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.41
TCF4-243ENST00000569357 TJP1Q07157 1748 aa12.51□□□□□ -0.41
TCF4-243ENST00000569357 DGKZQ13574 1117 aa12.51□□□□□ -0.41
TCF4-243ENST00000569357 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
TCF4-243ENST00000569357 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
TCF4-243ENST00000569357 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
TCF4-243ENST00000569357 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
TCF4-243ENST00000569357 AEBP1Q8IUX7 1158 aa12.5□□□□□ -0.41
TCF4-243ENST00000569357 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
TCF4-243ENST00000569357 ADAMTS7Q9UKP4 1686 aa12.5□□□□□ -0.41
TCF4-243ENST00000569357 NRXN2Q9P2S2 1712 aa12.5□□□□□ -0.41
TCF4-243ENST00000569357 AOC2O75106 756 aa12.49□□□□□ -0.41
TCF4-243ENST00000569357 CNBD1Q8NA66 436 aa12.49□□□□□ -0.41
TCF4-243ENST00000569357 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
TCF4-243ENST00000569357 ST5P78524 1137 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 STYK1Q6J9G0 422 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 MASTLQ96GX5 879 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 SCN4AP35499 1836 aa12.48□□□□□ -0.41
TCF4-243ENST00000569357 A0A087WZG4 1122 aa12.47□□□□□ -0.41
TCF4-243ENST00000569357 SRGNP10124 158 aa12.47□□□□□ -0.41
TCF4-243ENST00000569357 SOX10P56693 466 aa12.47□□□□□ -0.41
TCF4-243ENST00000569357 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
TCF4-243ENST00000569357 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
TCF4-243ENST00000569357 GJA3Q9Y6H8 435 aa12.47□□□□□ -0.41
TCF4-243ENST00000569357 ANKRD26Q9UPS8 1709 aa12.46□□□□□ -0.41
TCF4-243ENST00000569357 LMOD1P29536 600 aaPredicted RBP12.46□□□□□ -0.41
TCF4-243ENST00000569357 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
TCF4-243ENST00000569357 SULT6B1Q6IMI4 303 aa12.46□□□□□ -0.41
TCF4-243ENST00000569357 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.41
TCF4-243ENST00000569357 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
TCF4-243ENST00000569357 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
TCF4-243ENST00000569357 TRAF5O00463 557 aa12.45□□□□□ -0.42
TCF4-243ENST00000569357 STARD3NLO95772 234 aa12.45□□□□□ -0.42
TCF4-243ENST00000569357 MAP2K2P36507 400 aa12.45□□□□□ -0.42
TCF4-243ENST00000569357 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
TCF4-243ENST00000569357 OLFM4Q6UX06 510 aa12.45□□□□□ -0.42
TCF4-243ENST00000569357 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 CA12O43570 354 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 CST9Q5W186 159 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 GPC2Q8N158 579 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 JDP2Q8WYK2 163 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 TLL2Q9Y6L7 1015 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
TCF4-243ENST00000569357 COL11A2P13942 1736 aaPredicted RBP12.43□□□□□ -0.42
TCF4-243ENST00000569357 FZD9O00144 591 aa12.43□□□□□ -0.42
TCF4-243ENST00000569357 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
TCF4-243ENST00000569357 PRPF38BQ5VTL8 546 aaKnown RBP12.43□□□□□ -0.42
TCF4-243ENST00000569357 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
TCF4-243ENST00000569357 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
TCF4-243ENST00000569357 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
TCF4-243ENST00000569357 EIF6P56537 245 aaKnown RBP12.42□□□□□ -0.42
TCF4-243ENST00000569357 CIAPIN1Q6FI81 312 aa12.42□□□□□ -0.42
TCF4-243ENST00000569357 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
TCF4-243ENST00000569357 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms