RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-214ENST00000568917 LAMB4A4D0S4 1761 aa11.81□□□□□ -0.52
CNOT1-214ENST00000568917 IGHDP01880 384 aa11.81□□□□□ -0.52
CNOT1-214ENST00000568917 CABP4P57796 275 aa11.81□□□□□ -0.52
CNOT1-214ENST00000568917 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
CNOT1-214ENST00000568917 TTC5Q8N0Z6 440 aa11.8□□□□□ -0.52
CNOT1-214ENST00000568917 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
CNOT1-214ENST00000568917 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
CNOT1-214ENST00000568917 TNS2Q63HR2 1409 aa11.8□□□□□ -0.52
CNOT1-214ENST00000568917 KIF3CO14782 793 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 KCNQ3O43525 872 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
CNOT1-214ENST00000568917 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-214ENST00000568917 SMC5Q8IY18 1101 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 GCC1Q96CN9 775 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 ERBB4Q15303 1308 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
CNOT1-214ENST00000568917 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.79□□□□□ -0.52
CNOT1-214ENST00000568917 C5P01031 1676 aa11.78□□□□□ -0.52
CNOT1-214ENST00000568917 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
CNOT1-214ENST00000568917 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
CNOT1-214ENST00000568917 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
CNOT1-214ENST00000568917 DDX21Q9NR30 783 aaKnown RBP eCLIP11.78□□□□□ -0.52
CNOT1-214ENST00000568917 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
CNOT1-214ENST00000568917 GLI3P10071 1580 aa11.77□□□□□ -0.53
CNOT1-214ENST00000568917 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.53
CNOT1-214ENST00000568917 G2E3Q7L622 706 aa11.77□□□□□ -0.53
CNOT1-214ENST00000568917 CHPF2Q9P2E5 772 aa11.77□□□□□ -0.53
CNOT1-214ENST00000568917 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
CNOT1-214ENST00000568917 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
CNOT1-214ENST00000568917 C2orf72A6NCS6 295 aa11.76□□□□□ -0.53
CNOT1-214ENST00000568917 EXOC5O00471 708 aa11.76□□□□□ -0.53
CNOT1-214ENST00000568917 GNAI3P08754 354 aa11.76□□□□□ -0.53
CNOT1-214ENST00000568917 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
CNOT1-214ENST00000568917 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-214ENST00000568917 ITGB4P16144 1822 aa11.75□□□□□ -0.53
CNOT1-214ENST00000568917 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
CNOT1-214ENST00000568917 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
CNOT1-214ENST00000568917 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
CNOT1-214ENST00000568917 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
CNOT1-214ENST00000568917 KCPQ6ZWJ8 1503 aa11.75□□□□□ -0.53
CNOT1-214ENST00000568917 ADAMTS2O95450 1211 aa11.74□□□□□ -0.53
CNOT1-214ENST00000568917 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-214ENST00000568917 SLC39A6Q13433 755 aa11.74□□□□□ -0.53
CNOT1-214ENST00000568917 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
CNOT1-214ENST00000568917 DNAAF4Q8WXU2 420 aa11.74□□□□□ -0.53
CNOT1-214ENST00000568917 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-214ENST00000568917 HMMRO75330 724 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 SLC4A10Q6U841 1118 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 KSR2Q6VAB6 950 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 UNC5CLQ8IV45 518 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
CNOT1-214ENST00000568917 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 DDX54Q8TDD1 881 aaKnown RBP11.73□□□□□ -0.53
CNOT1-214ENST00000568917 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
CNOT1-214ENST00000568917 PHAXQ9H814 394 aaKnown RBP11.73□□□□□ -0.53
CNOT1-214ENST00000568917 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
CNOT1-214ENST00000568917 F6X3S4 739 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 GNAI2P04899 355 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 PDIA6Q15084 440 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 VPS72Q15906 364 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 CEP85Q6P2H3 762 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 BCL9O00512 1426 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 ADCY9O60503 1353 aa11.72□□□□□ -0.53
CNOT1-214ENST00000568917 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-214ENST00000568917 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-214ENST00000568917 SNPHO15079 494 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 ST18O60284 1047 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 NUCB1Q02818 461 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 DDB1Q16531 1140 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 BEND3Q5T5X7 828 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-214ENST00000568917 SIRT2Q8IXJ6 389 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 MEIS3Q99687 375 aa11.71□□□□□ -0.53
CNOT1-214ENST00000568917 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
CNOT1-214ENST00000568917 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-214ENST00000568917 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
CNOT1-214ENST00000568917 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
CNOT1-214ENST00000568917 LINS1Q8NG48 757 aa11.7□□□□□ -0.54
CNOT1-214ENST00000568917 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
CNOT1-214ENST00000568917 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
CNOT1-214ENST00000568917 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
CNOT1-214ENST00000568917 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
CNOT1-214ENST00000568917 UBTFL1P0CB47 393 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-214ENST00000568917 PDE4AP27815 886 aa11.69□□□□□ -0.54
CNOT1-214ENST00000568917 LRP10Q7Z4F1 713 aa11.69□□□□□ -0.54
CNOT1-214ENST00000568917 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
CNOT1-214ENST00000568917 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
CNOT1-214ENST00000568917 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms