RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
CCNDBP1-213ENST00000568507 CNKSR1Q969H4 720 aa19.68■□□□□ 0.74
CCNDBP1-213ENST00000568507 NMRK2Q9NPI5 230 aa19.68■□□□□ 0.74
CCNDBP1-213ENST00000568507 TSPYL4Q9UJ04 414 aa19.68■□□□□ 0.74
CCNDBP1-213ENST00000568507 TOMM70O94826 608 aa19.67■□□□□ 0.74
CCNDBP1-213ENST00000568507 HSPA6P17066 643 aa19.67■□□□□ 0.74
CCNDBP1-213ENST00000568507 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCNDBP1-213ENST00000568507 FAM177BA6PVY3 158 aa19.66■□□□□ 0.74
CCNDBP1-213ENST00000568507 C21orf2O43822 256 aa19.66■□□□□ 0.74
CCNDBP1-213ENST00000568507 TMPOP42166 694 aaKnown RBP19.66■□□□□ 0.74
CCNDBP1-213ENST00000568507 STYK1Q6J9G0 422 aa19.66■□□□□ 0.74
CCNDBP1-213ENST00000568507 MASTLQ96GX5 879 aa19.66■□□□□ 0.74
CCNDBP1-213ENST00000568507 MYL6BP14649 208 aa19.65■□□□□ 0.74
CCNDBP1-213ENST00000568507 GTF2E1P29083 439 aaPredicted RBP19.65■□□□□ 0.74
CCNDBP1-213ENST00000568507 HLFQ16534 295 aa19.65■□□□□ 0.74
CCNDBP1-213ENST00000568507 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
CCNDBP1-213ENST00000568507 SRGNP10124 158 aa19.64■□□□□ 0.73
CCNDBP1-213ENST00000568507 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
CCNDBP1-213ENST00000568507 CCDC146Q8IYE0 955 aa19.64■□□□□ 0.73
CCNDBP1-213ENST00000568507 RRAGCQ9HB90 399 aa19.64■□□□□ 0.73
CCNDBP1-213ENST00000568507 ZC3H4Q9UPT8 1303 aaKnown RBP19.64■□□□□ 0.73
CCNDBP1-213ENST00000568507 ERVV-1B6SEH8 477 aa19.63■□□□□ 0.73
CCNDBP1-213ENST00000568507 NFKBIEO00221 500 aa19.63■□□□□ 0.73
CCNDBP1-213ENST00000568507 BABAM1Q9NWV8 329 aa19.63■□□□□ 0.73
CCNDBP1-213ENST00000568507 SOGA3Q5TF21 947 aa19.62■□□□□ 0.73
CCNDBP1-213ENST00000568507 RUNDC1Q96C34 613 aa19.62■□□□□ 0.73
CCNDBP1-213ENST00000568507 MAP3K15Q6ZN16 1313 aa19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 NPR1P16066 1061 aa19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 EIF2S2P20042 333 aaKnown RBP19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 PRELPP51888 382 aa19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 TTLL7Q6ZT98 887 aa19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 NYXQ9GZU5 481 aa19.61■□□□□ 0.73
CCNDBP1-213ENST00000568507 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
CCNDBP1-213ENST00000568507 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
CCNDBP1-213ENST00000568507 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
CCNDBP1-213ENST00000568507 BCORQ6W2J9 1755 aa19.6■□□□□ 0.73
CCNDBP1-213ENST00000568507 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
CCNDBP1-213ENST00000568507 ZBTB3Q9H5J0 574 aa19.59■□□□□ 0.73
CCNDBP1-213ENST00000568507 KLRG2A4D1S0 409 aaPredicted RBP19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 GLTPD2A6NH11 291 aa19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 ERFEQ4G0M1 354 aa19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 PRKRIP1Q9H875 184 aaPredicted RBP19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 ADAMTS8Q9UP79 889 aa19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 KDM3BQ7LBC6 1761 aa19.58■□□□□ 0.73
CCNDBP1-213ENST00000568507 ANKRD31Q8N7Z5 1873 aa19.58■□□□□ 0.72
CCNDBP1-213ENST00000568507 APLP1P51693 650 aa19.57■□□□□ 0.72
CCNDBP1-213ENST00000568507 GPTP24298 496 aa19.57■□□□□ 0.72
CCNDBP1-213ENST00000568507 ALDH1B1P30837 517 aa19.57■□□□□ 0.72
CCNDBP1-213ENST00000568507 LTBP3Q9NS15 1303 aa19.56■□□□□ 0.72
CCNDBP1-213ENST00000568507 VEGFAP15692 232 aaPredicted RBP19.56■□□□□ 0.72
CCNDBP1-213ENST00000568507 FSTL1Q12841 308 aa19.56■□□□□ 0.72
CCNDBP1-213ENST00000568507 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
CCNDBP1-213ENST00000568507 NUTM1Q86Y26 1132 aa19.56■□□□□ 0.72
CCNDBP1-213ENST00000568507 LAMB4A4D0S4 1761 aa19.56■□□□□ 0.72
CCNDBP1-213ENST00000568507 CEP350Q5VT06 3117 aa19.55■□□□□ 0.72
CCNDBP1-213ENST00000568507 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
CCNDBP1-213ENST00000568507 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
CCNDBP1-213ENST00000568507 SBF1O95248 1867 aa19.54■□□□□ 0.72
CCNDBP1-213ENST00000568507 CHL1O00533 1208 aa19.54■□□□□ 0.72
CCNDBP1-213ENST00000568507 ZNF34Q8IZ26 560 aa19.54■□□□□ 0.72
CCNDBP1-213ENST00000568507 C7orf43Q8WVR3 580 aa19.54■□□□□ 0.72
CCNDBP1-213ENST00000568507 NECTIN2Q92692 538 aa19.54■□□□□ 0.72
CCNDBP1-213ENST00000568507 COL11A2P13942 1736 aaPredicted RBP19.53■□□□□ 0.72
CCNDBP1-213ENST00000568507 PDIA6Q15084 440 aa19.53■□□□□ 0.72
CCNDBP1-213ENST00000568507 SUSD4Q5VX71 490 aa19.53■□□□□ 0.72
CCNDBP1-213ENST00000568507 PPP1R42Q7Z4L9 355 aa19.53■□□□□ 0.72
CCNDBP1-213ENST00000568507 ANXA1P04083 346 aa19.52■□□□□ 0.72
CCNDBP1-213ENST00000568507 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
CCNDBP1-213ENST00000568507 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
CCNDBP1-213ENST00000568507 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
CCNDBP1-213ENST00000568507 AIMP1Q12904 312 aaKnown RBP19.51■□□□□ 0.71
CCNDBP1-213ENST00000568507 PROSER3Q2NL68 480 aa19.51■□□□□ 0.71
CCNDBP1-213ENST00000568507 RTKN2Q8IZC4 609 aa19.51■□□□□ 0.71
CCNDBP1-213ENST00000568507 UBN2Q6ZU65 1347 aa19.51■□□□□ 0.71
CCNDBP1-213ENST00000568507 FKBP4Q02790 459 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCNDBP1-213ENST00000568507 COPS6Q7L5N1 327 aa19.5■□□□□ 0.71
CCNDBP1-213ENST00000568507 LRP10Q7Z4F1 713 aa19.5■□□□□ 0.71
CCNDBP1-213ENST00000568507 SLX4Q8IY92 1834 aa19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 ABCC12Q96J65 1359 aa19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 IBTKQ9P2D0 1353 aaPredicted RBP19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 ZEB1P37275 1124 aaPredicted RBP19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 HSP90AB3PQ58FF7 597 aa19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 XAGE3Q8WTP9 111 aa19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 RBM17Q96I25 401 aaKnown RBP19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
CCNDBP1-213ENST00000568507 NTSR2O95665 410 aa19.48■□□□□ 0.71
CCNDBP1-213ENST00000568507 KRT24Q2M2I5 525 aa19.48■□□□□ 0.71
CCNDBP1-213ENST00000568507 OLFM4Q6UX06 510 aa19.48■□□□□ 0.71
CCNDBP1-213ENST00000568507 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
CCNDBP1-213ENST00000568507 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCNDBP1-213ENST00000568507 ZNF277Q9NRM2 450 aaPredicted RBP19.48■□□□□ 0.71
CCNDBP1-213ENST00000568507 TNRC6CQ9HCJ0 1690 aaKnown RBP19.47■□□□□ 0.71
CCNDBP1-213ENST00000568507 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
CCNDBP1-213ENST00000568507 SYNE4Q8N205 404 aa19.47■□□□□ 0.71
CCNDBP1-213ENST00000568507 NLRP3Q96P20 1036 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms