RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
CDH11-214ENST00000568340 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
CDH11-214ENST00000568340 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
CDH11-214ENST00000568340 KCNQ4P56696 695 aa13.14□□□□□ -0.31
CDH11-214ENST00000568340 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
CDH11-214ENST00000568340 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
CDH11-214ENST00000568340 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
CDH11-214ENST00000568340 PLSCR1O15162 318 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 AAMPQ13685 434 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 MEIS3Q99687 375 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 UTYO14607 1347 aa13.13□□□□□ -0.31
CDH11-214ENST00000568340 COL15A1P39059 1388 aa13.12□□□□□ -0.31
CDH11-214ENST00000568340 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
CDH11-214ENST00000568340 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
CDH11-214ENST00000568340 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
CDH11-214ENST00000568340 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
CDH11-214ENST00000568340 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
CDH11-214ENST00000568340 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
CDH11-214ENST00000568340 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
CDH11-214ENST00000568340 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
CDH11-214ENST00000568340 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
CDH11-214ENST00000568340 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
CDH11-214ENST00000568340 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
CDH11-214ENST00000568340 CAMTA2O94983 1202 aa13.1□□□□□ -0.31
CDH11-214ENST00000568340 CASP7P55210 303 aa13.1□□□□□ -0.31
CDH11-214ENST00000568340 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
CDH11-214ENST00000568340 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
CDH11-214ENST00000568340 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
CDH11-214ENST00000568340 RGL2O15211 777 aa13.09□□□□□ -0.31
CDH11-214ENST00000568340 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
CDH11-214ENST00000568340 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
CDH11-214ENST00000568340 CWF19L2Q2TBE0 894 aaKnown RBP13.09□□□□□ -0.31
CDH11-214ENST00000568340 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
CDH11-214ENST00000568340 SIRT2Q8IXJ6 389 aa13.09□□□□□ -0.31
CDH11-214ENST00000568340 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
CDH11-214ENST00000568340 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.32
CDH11-214ENST00000568340 RPS6KA4O75676 772 aa13.08□□□□□ -0.32
CDH11-214ENST00000568340 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.32
CDH11-214ENST00000568340 HLFQ16534 295 aa13.08□□□□□ -0.32
CDH11-214ENST00000568340 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
CDH11-214ENST00000568340 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
CDH11-214ENST00000568340 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
CDH11-214ENST00000568340 NUP98P52948 1817 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 AFDNP55196 1824 aaKnown RBP13.07□□□□□ -0.32
CDH11-214ENST00000568340 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
CDH11-214ENST00000568340 GIGYF2Q6Y7W6 1299 aaKnown RBP13.07□□□□□ -0.32
CDH11-214ENST00000568340 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
CDH11-214ENST00000568340 IGHDP01880 384 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 TCIRG1Q13488 830 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
CDH11-214ENST00000568340 GCKRQ14397 625 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 CEP85Q6P2H3 762 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
CDH11-214ENST00000568340 MYD88Q99836 296 aa13.06□□□□□ -0.32
CDH11-214ENST00000568340 GRM8O00222 908 aa13.05□□□□□ -0.32
CDH11-214ENST00000568340 APBA3O96018 575 aa13.05□□□□□ -0.32
CDH11-214ENST00000568340 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
CDH11-214ENST00000568340 LAMB2P55268 1798 aa13.04□□□□□ -0.32
CDH11-214ENST00000568340 GNPATO15228 680 aa13.04□□□□□ -0.32
CDH11-214ENST00000568340 MTX1Q13505 466 aa13.04□□□□□ -0.32
CDH11-214ENST00000568340 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
CDH11-214ENST00000568340 ANKRD44Q8N8A2 993 aa13.04□□□□□ -0.32
CDH11-214ENST00000568340 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
CDH11-214ENST00000568340 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
CDH11-214ENST00000568340 USP42Q9H9J4 1324 aaKnown RBP13.04□□□□□ -0.32
CDH11-214ENST00000568340 LRP5O75197 1615 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 H7C1W4 665 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 GNAI3P08754 354 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 ADRA2BP18089 450 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 NLRP10Q86W26 655 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
CDH11-214ENST00000568340 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
CDH11-214ENST00000568340 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
CDH11-214ENST00000568340 A0A087WZG4 1122 aa13.02□□□□□ -0.33
CDH11-214ENST00000568340 SSFA2P28290 1259 aa13.02□□□□□ -0.33
CDH11-214ENST00000568340 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.33
CDH11-214ENST00000568340 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
CDH11-214ENST00000568340 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
CDH11-214ENST00000568340 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
CDH11-214ENST00000568340 SUCLG2Q96I99 432 aa13.02□□□□□ -0.33
CDH11-214ENST00000568340 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
CDH11-214ENST00000568340 DDX60Q8IY21 1712 aaKnown RBP13.02□□□□□ -0.33
CDH11-214ENST00000568340 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
CDH11-214ENST00000568340 GNAI2P04899 355 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms