RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 HCN4Q9Y3Q4 1203 aa13.81□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 OIP5O43482 229 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 FAM157BP0CG42 384 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 RFX1P22670 979 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 C1orf53Q5VUE5 145 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 SCG3Q8WXD2 468 aaKnown RBP13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 GDF2Q9UK05 429 aaPredicted RBP13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 RNF225M0QZC1 329 aaPredicted RBP13.79□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 LRRC69Q6ZNQ3 347 aa13.79□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 RHPN1Q8TCX5 695 aa13.79□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 STAG2Q8N3U4 1231 aa13.78□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 ARXQ96QS3 562 aa13.78□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 PHACTR1Q9C0D0 580 aa13.78□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 HCN2Q9UL51 889 aa13.78□□□□□ -0.2
DNAAF4-CCPG1-202ENST00000568310 CD33P20138 364 aa13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 CDCA8Q53HL2 280 aa13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 FAM182BQ5T319 152 aa13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 GOLGA6L1Q8N7Z2 621 aa13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 SCARF2Q96GP6 870 aaPredicted RBP13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 EFSO43281 561 aa13.75□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 LGR5O75473 907 aa13.75□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 GALNT6Q8NCL4 622 aa13.75□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 GSK3AP49840 483 aa13.74□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 LAMC2Q13753 1193 aa13.74□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 GGA1Q9UJY5 639 aa13.74□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 ARAFP10398 606 aa13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 MARK1Q9P0L2 795 aa13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 ANKIB1Q9P2G1 1089 aa13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 DNMT3AQ9Y6K1 912 aaPredicted RBP13.73□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 IGFBP4P22692 258 aa13.72□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 SLCO4C1Q6ZQN7 724 aa13.72□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 EDARADDQ8WWZ3 215 aa13.72□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 RASSF7Q02833 373 aa13.71□□□□□ -0.21
DNAAF4-CCPG1-202ENST00000568310 SHISA8B8ZZ34 492 aa13.7□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 IRS1P35568 1242 aa13.7□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 HSH2DQ96JZ2 352 aa13.7□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 BEND7Q8N7W2 519 aaPredicted RBP13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 PRR12Q9ULL5 1215 aa13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 PODNQ7Z5L7 613 aa13.68□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 ZNF280CQ8ND82 737 aa13.68□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 ADH6P28332 368 aa13.67□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 WEE1P30291 646 aa13.67□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 GDF11O95390 407 aa13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 EPXP11678 715 aa13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 SFSWAPQ12872 951 aaKnown RBP13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 HIF1AQ16665 826 aa13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 ZNF468Q5VIY5 522 aaPredicted RBP13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 TMEM151AQ8N4L1 468 aa13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 KLF15Q9UIH9 416 aa13.66□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.65□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 SRPK2P78362 688 aaKnown RBP13.65□□□□□ -0.22
DNAAF4-CCPG1-202ENST00000568310 ELOAQ14241 798 aaKnown RBP13.64□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 RTN1Q16799 776 aa13.64□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 BRD7Q9NPI1 651 aa13.64□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 SERPINA10Q9UK55 444 aa13.64□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 FOXO3O43524 673 aa13.63□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 AMPD1P23109 780 aa13.63□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 PCBP4P57723 403 aaKnown RBP13.63□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 SNRPNP63162 240 aaKnown RBP13.62□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 TYRO3Q06418 890 aa13.62□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 FCHSD1Q86WN1 690 aa13.62□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 BTLAQ7Z6A9 289 aa13.61□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 BTBD6Q96KE9 485 aa13.61□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 ACIN1Q9UKV3 1341 aaKnown RBP13.61□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 KCNQ4P56696 695 aa13.6□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 SWI5Q1ZZU3 235 aa13.6□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 SYT9Q86SS6 491 aa13.6□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 VTI1AQ96AJ9 217 aa13.6□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 ATG7O95352 703 aa13.59□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 SLC30A3Q99726 388 aa13.59□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 MKL2Q9ULH7 1088 aa13.59□□□□□ -0.23
DNAAF4-CCPG1-202ENST00000568310 KCNH4Q9UQ05 1017 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms