RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
COMMD4-223ENST00000568301 PPP2R1AP30153 589 aa20.1■□□□□ 0.81
COMMD4-223ENST00000568301 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
COMMD4-223ENST00000568301 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
COMMD4-223ENST00000568301 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
COMMD4-223ENST00000568301 CACNA1SQ13698 1873 aa20.09■□□□□ 0.81
COMMD4-223ENST00000568301 DDNO94850 711 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-223ENST00000568301 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
COMMD4-223ENST00000568301 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
COMMD4-223ENST00000568301 TAOK3Q9H2K8 898 aa20.09■□□□□ 0.81
COMMD4-223ENST00000568301 LTBP3Q9NS15 1303 aa20.08■□□□□ 0.81
COMMD4-223ENST00000568301 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
COMMD4-223ENST00000568301 SNRPA1P09661 255 aaKnown RBP20.08■□□□□ 0.81
COMMD4-223ENST00000568301 CLEC4GQ6UXB4 293 aa20.08■□□□□ 0.81
COMMD4-223ENST00000568301 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.81
COMMD4-223ENST00000568301 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
COMMD4-223ENST00000568301 CNKSR1Q969H4 720 aa20.08■□□□□ 0.81
COMMD4-223ENST00000568301 NPHP1O15259 732 aa20.07■□□□□ 0.8
COMMD4-223ENST00000568301 SRGNP10124 158 aa20.07■□□□□ 0.8
COMMD4-223ENST00000568301 STYK1Q6J9G0 422 aa20.07■□□□□ 0.8
COMMD4-223ENST00000568301 CHADLQ6NUI6 762 aa20.07■□□□□ 0.8
COMMD4-223ENST00000568301 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
COMMD4-223ENST00000568301 ST5P78524 1137 aa20.06■□□□□ 0.8
COMMD4-223ENST00000568301 MCM10Q7L590 875 aa20.06■□□□□ 0.8
COMMD4-223ENST00000568301 CREBZFQ9NS37 354 aa20.06■□□□□ 0.8
COMMD4-223ENST00000568301 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
COMMD4-223ENST00000568301 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
COMMD4-223ENST00000568301 RGL2O15211 777 aa20.05■□□□□ 0.8
COMMD4-223ENST00000568301 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-223ENST00000568301 MASTLQ96GX5 879 aa20.05■□□□□ 0.8
COMMD4-223ENST00000568301 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
COMMD4-223ENST00000568301 PRAMEF22A3QJZ6 481 aa20.03■□□□□ 0.8
COMMD4-223ENST00000568301 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-223ENST00000568301 C7orf43Q8WVR3 580 aa20.03■□□□□ 0.8
COMMD4-223ENST00000568301 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
COMMD4-223ENST00000568301 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
COMMD4-223ENST00000568301 SOGA3Q5TF21 947 aa20.02■□□□□ 0.8
COMMD4-223ENST00000568301 NBPF26B4DH59 902 aa20.01■□□□□ 0.79
COMMD4-223ENST00000568301 NBPF10Q6P3W6 841 aaKnown RBP20.01■□□□□ 0.79
COMMD4-223ENST00000568301 NBPF5PQ86XG9 351 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-223ENST00000568301 NBPF15Q8N660 670 aa20.01■□□□□ 0.79
COMMD4-223ENST00000568301 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
COMMD4-223ENST00000568301 TAF1DQ9H5J8 278 aaPredicted RBP20■□□□□ 0.79
COMMD4-223ENST00000568301 KLRG2A4D1S0 409 aaPredicted RBP19.99■□□□□ 0.79
COMMD4-223ENST00000568301 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
COMMD4-223ENST00000568301 LDHDQ86WU2 507 aa19.99■□□□□ 0.79
COMMD4-223ENST00000568301 L3MBTL3Q96JM7 780 aaPredicted RBP19.99■□□□□ 0.79
COMMD4-223ENST00000568301 PASKQ96RG2 1323 aa19.99■□□□□ 0.79
COMMD4-223ENST00000568301 CNTNAP1P78357 1384 aa19.98■□□□□ 0.79
COMMD4-223ENST00000568301 SCN4AP35499 1836 aa19.98■□□□□ 0.79
COMMD4-223ENST00000568301 NEFMP07197 916 aa19.98■□□□□ 0.79
COMMD4-223ENST00000568301 NPR1P16066 1061 aa19.98■□□□□ 0.79
COMMD4-223ENST00000568301 CCDC93Q567U6 631 aa19.98■□□□□ 0.79
COMMD4-223ENST00000568301 OLFM4Q6UX06 510 aa19.98■□□□□ 0.79
COMMD4-223ENST00000568301 FOXN1O15353 648 aa19.97■□□□□ 0.79
COMMD4-223ENST00000568301 ZNF277Q9NRM2 450 aaPredicted RBP19.97■□□□□ 0.79
COMMD4-223ENST00000568301 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
COMMD4-223ENST00000568301 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
COMMD4-223ENST00000568301 FKBP4Q02790 459 aaKnown RBP eCLIP19.96■□□□□ 0.79
COMMD4-223ENST00000568301 PNISRQ8TF01 805 aaKnown RBP19.96■□□□□ 0.79
COMMD4-223ENST00000568301 MIS18AQ9NYP9 233 aa19.96■□□□□ 0.79
COMMD4-223ENST00000568301 ZNF541Q9H0D2 1346 aa19.96■□□□□ 0.79
COMMD4-223ENST00000568301 FAM177BA6PVY3 158 aa19.95■□□□□ 0.78
COMMD4-223ENST00000568301 ITGBL1O95965 494 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-223ENST00000568301 EAPPQ56P03 285 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-223ENST00000568301 LAMB4A4D0S4 1761 aa19.93■□□□□ 0.78
COMMD4-223ENST00000568301 TMEM88BA6NKF7 163 aa19.93■□□□□ 0.78
COMMD4-223ENST00000568301 VEGFBP49765 207 aa19.93■□□□□ 0.78
COMMD4-223ENST00000568301 HLFQ16534 295 aa19.93■□□□□ 0.78
COMMD4-223ENST00000568301 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
COMMD4-223ENST00000568301 ERVV-1B6SEH8 477 aa19.92■□□□□ 0.78
COMMD4-223ENST00000568301 ALDH1B1P30837 517 aa19.92■□□□□ 0.78
COMMD4-223ENST00000568301 RTKN2Q8IZC4 609 aa19.92■□□□□ 0.78
COMMD4-223ENST00000568301 PNNQ9H307 717 aaKnown RBP19.92■□□□□ 0.78
COMMD4-223ENST00000568301 HACL1Q9UJ83 578 aa19.92■□□□□ 0.78
COMMD4-223ENST00000568301 CLEC11AQ9Y240 323 aa19.92■□□□□ 0.78
COMMD4-223ENST00000568301 KDM3BQ7LBC6 1761 aa19.91■□□□□ 0.78
COMMD4-223ENST00000568301 EPHX2P34913 555 aa19.91■□□□□ 0.78
COMMD4-223ENST00000568301 NFE2L2Q16236 605 aa19.91■□□□□ 0.78
COMMD4-223ENST00000568301 SYNE4Q8N205 404 aa19.91■□□□□ 0.78
COMMD4-223ENST00000568301 ADAMTSL1Q8N6G6 1762 aa19.9■□□□□ 0.78
COMMD4-223ENST00000568301 NUP98P52948 1817 aa19.9■□□□□ 0.78
COMMD4-223ENST00000568301 FZD9O00144 591 aa19.9■□□□□ 0.78
COMMD4-223ENST00000568301 GTF2E1P29083 439 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-223ENST00000568301 IARSP41252 1262 aaKnown RBP19.9■□□□□ 0.78
COMMD4-223ENST00000568301 EIF4A1P60842 406 aaKnown RBP19.9■□□□□ 0.78
COMMD4-223ENST00000568301 PRDM10Q9NQV6 1147 aa19.9■□□□□ 0.78
COMMD4-223ENST00000568301 RNF123Q5XPI4 1314 aa19.9■□□□□ 0.78
COMMD4-223ENST00000568301 NYXQ9GZU5 481 aa19.89■□□□□ 0.77
COMMD4-223ENST00000568301 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
COMMD4-223ENST00000568301 CTCFP49711 727 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-223ENST00000568301 MAP1SQ66K74 1059 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-223ENST00000568301 CNTROBQ8N137 903 aa19.88■□□□□ 0.77
COMMD4-223ENST00000568301 AIDAQ96BJ3 306 aa19.88■□□□□ 0.77
COMMD4-223ENST00000568301 CRY2Q49AN0 593 aa19.87■□□□□ 0.77
COMMD4-223ENST00000568301 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
COMMD4-223ENST00000568301 WBP1LQ9NX94 342 aa19.87■□□□□ 0.77
COMMD4-223ENST00000568301 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
COMMD4-223ENST00000568301 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
COMMD4-223ENST00000568301 KIF6Q6ZMV9 814 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms