RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
GINS3-209ENST00000567909 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
GINS3-209ENST00000567909 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
GINS3-209ENST00000567909 POLRMTO00411 1230 aaKnown RBP16.42■□□□□ 0.22
GINS3-209ENST00000567909 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
GINS3-209ENST00000567909 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
GINS3-209ENST00000567909 LRP10Q7Z4F1 713 aa16.42■□□□□ 0.22
GINS3-209ENST00000567909 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
GINS3-209ENST00000567909 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
GINS3-209ENST00000567909 MAP3K15Q6ZN16 1313 aa16.42■□□□□ 0.22
GINS3-209ENST00000567909 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
GINS3-209ENST00000567909 HLFQ16534 295 aa16.41■□□□□ 0.22
GINS3-209ENST00000567909 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
GINS3-209ENST00000567909 NLGN2Q8NFZ4 835 aa16.41■□□□□ 0.22
GINS3-209ENST00000567909 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
GINS3-209ENST00000567909 SERPINB2P05120 415 aa16.4■□□□□ 0.22
GINS3-209ENST00000567909 HNRNPUQ00839 825 aaKnown RBP eCLIP16.4■□□□□ 0.22
GINS3-209ENST00000567909 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
GINS3-209ENST00000567909 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
GINS3-209ENST00000567909 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
GINS3-209ENST00000567909 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
GINS3-209ENST00000567909 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
GINS3-209ENST00000567909 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
GINS3-209ENST00000567909 E9PSI1 815 aa16.39■□□□□ 0.21
GINS3-209ENST00000567909 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
GINS3-209ENST00000567909 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
GINS3-209ENST00000567909 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
GINS3-209ENST00000567909 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
GINS3-209ENST00000567909 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
GINS3-209ENST00000567909 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
GINS3-209ENST00000567909 NPHP1O15259 732 aa16.38■□□□□ 0.21
GINS3-209ENST00000567909 STK31Q9BXU1 1019 aa16.38■□□□□ 0.21
GINS3-209ENST00000567909 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
GINS3-209ENST00000567909 ANKRD36CQ5JPF3 1778 aa16.38■□□□□ 0.21
GINS3-209ENST00000567909 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
GINS3-209ENST00000567909 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
GINS3-209ENST00000567909 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
GINS3-209ENST00000567909 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
GINS3-209ENST00000567909 RGL2O15211 777 aa16.36■□□□□ 0.21
GINS3-209ENST00000567909 VAMP4O75379 141 aa16.36■□□□□ 0.21
GINS3-209ENST00000567909 GPTP24298 496 aa16.36■□□□□ 0.21
GINS3-209ENST00000567909 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
GINS3-209ENST00000567909 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
GINS3-209ENST00000567909 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
GINS3-209ENST00000567909 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
GINS3-209ENST00000567909 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
GINS3-209ENST00000567909 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
GINS3-209ENST00000567909 CNBD1Q8NA66 436 aa16.35■□□□□ 0.21
GINS3-209ENST00000567909 KIAA1551Q9HCM1 1747 aa16.35■□□□□ 0.21
GINS3-209ENST00000567909 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
GINS3-209ENST00000567909 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
GINS3-209ENST00000567909 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
GINS3-209ENST00000567909 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
GINS3-209ENST00000567909 PLBD2Q8NHP8 589 aa16.34■□□□□ 0.21
GINS3-209ENST00000567909 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
GINS3-209ENST00000567909 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
GINS3-209ENST00000567909 TGFB2P61812 414 aa16.33■□□□□ 0.2
GINS3-209ENST00000567909 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
GINS3-209ENST00000567909 DPEP1P16444 411 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
GINS3-209ENST00000567909 ST5P78524 1137 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 GPR162Q16538 588 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 G2E3Q7L622 706 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
GINS3-209ENST00000567909 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
GINS3-209ENST00000567909 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
GINS3-209ENST00000567909 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
GINS3-209ENST00000567909 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
GINS3-209ENST00000567909 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
GINS3-209ENST00000567909 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
GINS3-209ENST00000567909 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
GINS3-209ENST00000567909 CHRNA5P30532 468 aa16.3■□□□□ 0.2
GINS3-209ENST00000567909 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
GINS3-209ENST00000567909 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
GINS3-209ENST00000567909 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
GINS3-209ENST00000567909 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
GINS3-209ENST00000567909 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
GINS3-209ENST00000567909 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
GINS3-209ENST00000567909 NUTM1Q86Y26 1132 aa16.29■□□□□ 0.2
GINS3-209ENST00000567909 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
GINS3-209ENST00000567909 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 COL11A2P13942 1736 aaPredicted RBP16.28■□□□□ 0.2
GINS3-209ENST00000567909 PDE6BP35913 854 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 FLIIQ13045 1269 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 FKBP5Q13451 457 aaPredicted RBP16.28■□□□□ 0.2
GINS3-209ENST00000567909 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 MYD88Q99836 296 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
GINS3-209ENST00000567909 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
GINS3-209ENST00000567909 ZBED9Q6R2W3 1325 aa16.27■□□□□ 0.2
GINS3-209ENST00000567909 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
GINS3-209ENST00000567909 H0YIN7 160 aa16.27■□□□□ 0.2
GINS3-209ENST00000567909 NTSR2O95665 410 aa16.27■□□□□ 0.2
GINS3-209ENST00000567909 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
GINS3-209ENST00000567909 KCNA3P22001 575 aa16.27■□□□□ 0.2
GINS3-209ENST00000567909 ERFEQ4G0M1 354 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms