RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ZBTB1Q9Y2K1 713 aa19.05■□□□□ 0.64
SMG1-213ENST00000567737 EPHX2P34913 555 aa19.04■□□□□ 0.64
SMG1-213ENST00000567737 MAP1SQ66K74 1059 aaPredicted RBP19.04■□□□□ 0.64
SMG1-213ENST00000567737 MKRN4PQ13434 485 aaPredicted RBP19.03■□□□□ 0.64
SMG1-213ENST00000567737 CAPNS2Q96L46 248 aa19.03■□□□□ 0.64
SMG1-213ENST00000567737 GRM1Q13255 1194 aa19.02■□□□□ 0.64
SMG1-213ENST00000567737 PRPF40BQ6NWY9 871 aaKnown RBP19.02■□□□□ 0.64
SMG1-213ENST00000567737 MCOLN1Q9GZU1 580 aa19.02■□□□□ 0.64
SMG1-213ENST00000567737 PRR5LQ6MZQ0 368 aa19.01■□□□□ 0.63
SMG1-213ENST00000567737 GPR101Q96P66 508 aaPredicted RBP19.01■□□□□ 0.63
SMG1-213ENST00000567737 ADAMTSL1Q8N6G6 1762 aa19.01■□□□□ 0.63
SMG1-213ENST00000567737 THSD7BQ9C0I4 1608 aa19■□□□□ 0.63
SMG1-213ENST00000567737 NPHP1O15259 732 aa19■□□□□ 0.63
SMG1-213ENST00000567737 TBC1D9BQ66K14 1250 aa19■□□□□ 0.63
SMG1-213ENST00000567737 STYK1Q6J9G0 422 aa19■□□□□ 0.63
SMG1-213ENST00000567737 CCDC24Q8N4L8 307 aa19■□□□□ 0.63
SMG1-213ENST00000567737 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
SMG1-213ENST00000567737 TSKSQ9UJT2 592 aa19■□□□□ 0.63
SMG1-213ENST00000567737 ANKRD31Q8N7Z5 1873 aa19■□□□□ 0.63
SMG1-213ENST00000567737 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
SMG1-213ENST00000567737 ZNF541Q9H0D2 1346 aa19■□□□□ 0.63
SMG1-213ENST00000567737 A0A087WZG4 1122 aa18.99■□□□□ 0.63
SMG1-213ENST00000567737 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
SMG1-213ENST00000567737 TNNT2P45379 298 aaPredicted RBP18.99■□□□□ 0.63
SMG1-213ENST00000567737 CYP4F22Q6NT55 531 aa18.99■□□□□ 0.63
SMG1-213ENST00000567737 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
SMG1-213ENST00000567737 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
SMG1-213ENST00000567737 SLC52A2Q9HAB3 445 aa18.98■□□□□ 0.63
SMG1-213ENST00000567737 SRGNP10124 158 aa18.97■□□□□ 0.63
SMG1-213ENST00000567737 MASTLQ96GX5 879 aa18.97■□□□□ 0.63
SMG1-213ENST00000567737 CA12O43570 354 aa18.96■□□□□ 0.63
SMG1-213ENST00000567737 ST5P78524 1137 aa18.96■□□□□ 0.63
SMG1-213ENST00000567737 SLC39A6Q13433 755 aa18.96■□□□□ 0.63
SMG1-213ENST00000567737 CNBD1Q8NA66 436 aa18.96■□□□□ 0.63
SMG1-213ENST00000567737 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
SMG1-213ENST00000567737 MAP2K2P36507 400 aa18.95■□□□□ 0.62
SMG1-213ENST00000567737 FKBP4Q02790 459 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMG1-213ENST00000567737 DGKZQ13574 1117 aa18.95■□□□□ 0.62
SMG1-213ENST00000567737 AEBP1Q8IUX7 1158 aa18.95■□□□□ 0.62
SMG1-213ENST00000567737 ZNF277Q9NRM2 450 aaPredicted RBP18.95■□□□□ 0.62
SMG1-213ENST00000567737 EIF5P55010 431 aaKnown RBP18.94■□□□□ 0.62
SMG1-213ENST00000567737 AKAP4Q5JQC9 854 aa18.94■□□□□ 0.62
SMG1-213ENST00000567737 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
SMG1-213ENST00000567737 TNRC18O15417 2968 aaPredicted RBP18.94■□□□□ 0.62
SMG1-213ENST00000567737 SCN11AQ9UI33 1791 aa18.93■□□□□ 0.62
SMG1-213ENST00000567737 GPC2Q8N158 579 aa18.93■□□□□ 0.62
SMG1-213ENST00000567737 CACNA1SQ13698 1873 aa18.92■□□□□ 0.62
SMG1-213ENST00000567737 AOC2O75106 756 aa18.92■□□□□ 0.62
SMG1-213ENST00000567737 STARD3NLO95772 234 aa18.92■□□□□ 0.62
SMG1-213ENST00000567737 SETDB2Q96T68 719 aa18.92■□□□□ 0.62
SMG1-213ENST00000567737 TLL2Q9Y6L7 1015 aa18.92■□□□□ 0.62
SMG1-213ENST00000567737 LTBP1Q14766 1721 aa18.91■□□□□ 0.62
SMG1-213ENST00000567737 ARFGEF2Q9Y6D5 1785 aa18.91■□□□□ 0.62
SMG1-213ENST00000567737 FZD9O00144 591 aa18.91■□□□□ 0.62
SMG1-213ENST00000567737 LMOD1P29536 600 aaPredicted RBP18.91■□□□□ 0.62
SMG1-213ENST00000567737 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
SMG1-213ENST00000567737 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
SMG1-213ENST00000567737 LGR6Q9HBX8 967 aa18.91■□□□□ 0.62
SMG1-213ENST00000567737 ZNF330Q9Y3S2 320 aaPredicted RBP18.91■□□□□ 0.62
SMG1-213ENST00000567737 FMR1Q06787 632 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMG1-213ENST00000567737 PRPF38BQ5VTL8 546 aaKnown RBP18.9■□□□□ 0.62
SMG1-213ENST00000567737 RTKN2Q8IZC4 609 aa18.9■□□□□ 0.62
SMG1-213ENST00000567737 TBC1D2BQ9UPU7 963 aa18.9■□□□□ 0.62
SMG1-213ENST00000567737 SCN7AQ01118 1682 aa18.89■□□□□ 0.61
SMG1-213ENST00000567737 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
SMG1-213ENST00000567737 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
SMG1-213ENST00000567737 MRC1P22897 1456 aa18.89■□□□□ 0.61
SMG1-213ENST00000567737 PDE4DIPQ5VU43 2346 aa18.88■□□□□ 0.61
SMG1-213ENST00000567737 RNMTO43148 476 aaKnown RBP18.88■□□□□ 0.61
SMG1-213ENST00000567737 CST9Q5W186 159 aa18.88■□□□□ 0.61
SMG1-213ENST00000567737 NPR1P16066 1061 aa18.87■□□□□ 0.61
SMG1-213ENST00000567737 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
SMG1-213ENST00000567737 TTC5Q8N0Z6 440 aa18.87■□□□□ 0.61
SMG1-213ENST00000567737 JDP2Q8WYK2 163 aa18.87■□□□□ 0.61
SMG1-213ENST00000567737 GJA3Q9Y6H8 435 aa18.87■□□□□ 0.61
SMG1-213ENST00000567737 TRAF5O00463 557 aa18.86■□□□□ 0.61
SMG1-213ENST00000567737 EIF6P56537 245 aaKnown RBP18.86■□□□□ 0.61
SMG1-213ENST00000567737 SOX10P56693 466 aa18.86■□□□□ 0.61
SMG1-213ENST00000567737 CASP8AP2Q9UKL3 1982 aa18.85■□□□□ 0.61
SMG1-213ENST00000567737 IL6STP40189 918 aaPredicted RBP18.85■□□□□ 0.61
SMG1-213ENST00000567737 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
SMG1-213ENST00000567737 OLFM4Q6UX06 510 aa18.84■□□□□ 0.61
SMG1-213ENST00000567737 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
SMG1-213ENST00000567737 SAPCD2Q86UD0 394 aa18.84■□□□□ 0.61
SMG1-213ENST00000567737 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
SMG1-213ENST00000567737 HHIPL1Q96JK4 782 aa18.83■□□□□ 0.6
SMG1-213ENST00000567737 TEX13AQ9BXU3 409 aaPredicted RBP18.83■□□□□ 0.6
SMG1-213ENST00000567737 TRPM7Q96QT4 1865 aa18.83■□□□□ 0.6
SMG1-213ENST00000567737 CAMTA2O94983 1202 aa18.82■□□□□ 0.6
SMG1-213ENST00000567737 EPS15P42566 896 aa18.82■□□□□ 0.6
SMG1-213ENST00000567737 CIAPIN1Q6FI81 312 aa18.82■□□□□ 0.6
SMG1-213ENST00000567737 CELF2O95319 508 aaKnown RBP18.81■□□□□ 0.6
SMG1-213ENST00000567737 SCNN1DP51172 638 aa18.81■□□□□ 0.6
SMG1-213ENST00000567737 ALDH1B1P30837 517 aa18.8■□□□□ 0.6
SMG1-213ENST00000567737 PSMD1Q99460 953 aa18.8■□□□□ 0.6
SMG1-213ENST00000567737 UBR2Q8IWV8 1755 aa18.8■□□□□ 0.6
SMG1-213ENST00000567737 DZIP3Q86Y13 1208 aaKnown RBP18.79■□□□□ 0.6
SMG1-213ENST00000567737 HEG1Q9ULI3 1381 aa18.79■□□□□ 0.6
SMG1-213ENST00000567737 KLRG2A4D1S0 409 aaPredicted RBP18.78■□□□□ 0.6
SMG1-213ENST00000567737 IL13P35225 146 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms