RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 CFAP53Q96M91 514 aa30.7■■■□□ 2.51
CNEP1R1-209ENST00000567712 U2AF1L5P0DN76 240 aaPredicted RBP30.69■■■□□ 2.5
CNEP1R1-209ENST00000567712 U2AF1Q01081 240 aaKnown RBP eCLIP30.69■■■□□ 2.5
CNEP1R1-209ENST00000567712 PDZRN3Q9UPQ7 1066 aa30.69■■■□□ 2.5
CNEP1R1-209ENST00000567712 NBPF26B4DH59 902 aa30.67■■■□□ 2.5
CNEP1R1-209ENST00000567712 SRGNP10124 158 aa30.67■■■□□ 2.5
CNEP1R1-209ENST00000567712 NBPF10Q6P3W6 841 aaKnown RBP30.67■■■□□ 2.5
CNEP1R1-209ENST00000567712 NBPF15Q8N660 670 aa30.67■■■□□ 2.5
CNEP1R1-209ENST00000567712 ERFEQ4G0M1 354 aa30.66■■■□□ 2.5
CNEP1R1-209ENST00000567712 DLG5Q8TDM6 1919 aa30.65■■■□□ 2.5
CNEP1R1-209ENST00000567712 PRPF40BQ6NWY9 871 aaKnown RBP30.65■■■□□ 2.5
CNEP1R1-209ENST00000567712 NUDCQ9Y266 331 aa30.65■■■□□ 2.5
CNEP1R1-209ENST00000567712 SNRPA1P09661 255 aaKnown RBP30.64■■■□□ 2.5
CNEP1R1-209ENST00000567712 STYK1Q6J9G0 422 aa30.64■■■□□ 2.5
CNEP1R1-209ENST00000567712 ST5P78524 1137 aa30.63■■■□□ 2.49
CNEP1R1-209ENST00000567712 NPM2Q86SE8 214 aaKnown RBP30.63■■■□□ 2.49
CNEP1R1-209ENST00000567712 CNKSR1Q969H4 720 aa30.63■■■□□ 2.49
CNEP1R1-209ENST00000567712 LTBP3Q9NS15 1303 aa30.63■■■□□ 2.49
CNEP1R1-209ENST00000567712 NPHP1O15259 732 aa30.62■■■□□ 2.49
CNEP1R1-209ENST00000567712 COL13A1Q5TAT6 717 aaPredicted RBP30.62■■■□□ 2.49
CNEP1R1-209ENST00000567712 RTF1Q92541 710 aaKnown RBP30.62■■■□□ 2.49
CNEP1R1-209ENST00000567712 MASTLQ96GX5 879 aa30.62■■■□□ 2.49
CNEP1R1-209ENST00000567712 TAOK3Q9H2K8 898 aa30.62■■■□□ 2.49
CNEP1R1-209ENST00000567712 DPY19L2Q6NUT2 758 aa30.61■■■□□ 2.49
CNEP1R1-209ENST00000567712 MIS18AQ9NYP9 233 aa30.61■■■□□ 2.49
CNEP1R1-209ENST00000567712 CLEC4GQ6UXB4 293 aa30.6■■■□□ 2.49
CNEP1R1-209ENST00000567712 NBPF5PQ86XG9 351 aaPredicted RBP30.6■■■□□ 2.49
CNEP1R1-209ENST00000567712 C7orf43Q8WVR3 580 aa30.6■■■□□ 2.49
CNEP1R1-209ENST00000567712 DDNO94850 711 aaPredicted RBP30.59■■■□□ 2.49
CNEP1R1-209ENST00000567712 POTEIP0CG38 1075 aa30.58■■■□□ 2.49
CNEP1R1-209ENST00000567712 POTEJP0CG39 1038 aa30.58■■■□□ 2.49
CNEP1R1-209ENST00000567712 LAMB4A4D0S4 1761 aa30.57■■■□□ 2.48
CNEP1R1-209ENST00000567712 HLFQ16534 295 aa30.57■■■□□ 2.48
CNEP1R1-209ENST00000567712 OLFM4Q6UX06 510 aa30.57■■■□□ 2.48
CNEP1R1-209ENST00000567712 KLRG2A4D1S0 409 aaPredicted RBP30.55■■■□□ 2.48
CNEP1R1-209ENST00000567712 HTATSF1O43719 755 aaKnown RBP30.55■■■□□ 2.48
CNEP1R1-209ENST00000567712 NIP7Q9Y221 180 aaKnown RBP eCLIP30.55■■■□□ 2.48
CNEP1R1-209ENST00000567712 KDM3BQ7LBC6 1761 aa30.55■■■□□ 2.48
CNEP1R1-209ENST00000567712 FAM177BA6PVY3 158 aa30.54■■■□□ 2.48
CNEP1R1-209ENST00000567712 TAF7Q15545 349 aaPredicted RBP30.54■■■□□ 2.48
CNEP1R1-209ENST00000567712 NUP98P52948 1817 aa30.54■■■□□ 2.48
CNEP1R1-209ENST00000567712 ZNF652Q9Y2D9 606 aa30.53■■■□□ 2.48
CNEP1R1-209ENST00000567712 NPR1P16066 1061 aa30.52■■■□□ 2.48
CNEP1R1-209ENST00000567712 SOGA3Q5TF21 947 aa30.5■■■□□ 2.47
CNEP1R1-209ENST00000567712 TPTE2Q6XPS3 522 aa30.5■■■□□ 2.47
CNEP1R1-209ENST00000567712 SCN4AP35499 1836 aa30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 CCDC93Q567U6 631 aa30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 CHADLQ6NUI6 762 aa30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 NGEFQ8N5V2 710 aa30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 PLEKHF1Q96S99 279 aa30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 THUMPD2Q9BTF0 503 aaKnown RBP30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 ZNF277Q9NRM2 450 aaPredicted RBP30.48■■■□□ 2.47
CNEP1R1-209ENST00000567712 RGL2O15211 777 aa30.47■■■□□ 2.47
CNEP1R1-209ENST00000567712 ZNF541Q9H0D2 1346 aa30.47■■■□□ 2.47
CNEP1R1-209ENST00000567712 HSPA1AP0DMV8 641 aaKnown RBP30.46■■■□□ 2.47
CNEP1R1-209ENST00000567712 HSPA1BP0DMV9 641 aaKnown RBP30.46■■■□□ 2.47
CNEP1R1-209ENST00000567712 ABCC12Q96J65 1359 aa30.45■■■□□ 2.47
CNEP1R1-209ENST00000567712 FKBP4Q02790 459 aaKnown RBP eCLIP30.45■■■□□ 2.47
CNEP1R1-209ENST00000567712 TTLL7Q6ZT98 887 aa30.44■■■□□ 2.46
CNEP1R1-209ENST00000567712 NUTM1Q86Y26 1132 aa30.44■■■□□ 2.46
CNEP1R1-209ENST00000567712 L3MBTL3Q96JM7 780 aaPredicted RBP30.44■■■□□ 2.46
CNEP1R1-209ENST00000567712 EIF4A1P60842 406 aaKnown RBP30.43■■■□□ 2.46
CNEP1R1-209ENST00000567712 SNED1Q8TER0 1413 aa30.43■■■□□ 2.46
CNEP1R1-209ENST00000567712 SLC51AQ86UW1 340 aa30.42■■■□□ 2.46
CNEP1R1-209ENST00000567712 TAF1DQ9H5J8 278 aaPredicted RBP30.42■■■□□ 2.46
CNEP1R1-209ENST00000567712 MKRN1Q9UHC7 482 aaKnown RBP30.41■■■□□ 2.46
CNEP1R1-209ENST00000567712 RRP7AQ9Y3A4 280 aaKnown RBP30.41■■■□□ 2.46
CNEP1R1-209ENST00000567712 CREBZFQ9NS37 354 aa30.4■■■□□ 2.46
CNEP1R1-209ENST00000567712 COL4A5P29400 1685 aa30.39■■■□□ 2.46
CNEP1R1-209ENST00000567712 CRY2Q49AN0 593 aa30.39■■■□□ 2.46
CNEP1R1-209ENST00000567712 SYNE4Q8N205 404 aa30.39■■■□□ 2.46
CNEP1R1-209ENST00000567712 MAP3K15Q6ZN16 1313 aa30.39■■■□□ 2.46
CNEP1R1-209ENST00000567712 UBN2Q6ZU65 1347 aa30.39■■■□□ 2.46
CNEP1R1-209ENST00000567712 PASKQ96RG2 1323 aa30.39■■■□□ 2.46
CNEP1R1-209ENST00000567712 ADAMTSL1Q8N6G6 1762 aa30.38■■■□□ 2.45
CNEP1R1-209ENST00000567712 ERVV-1B6SEH8 477 aa30.38■■■□□ 2.45
CNEP1R1-209ENST00000567712 MYL6BP14649 208 aa30.38■■■□□ 2.45
CNEP1R1-209ENST00000567712 NFE2L2Q16236 605 aa30.38■■■□□ 2.45
CNEP1R1-209ENST00000567712 IQCA1LA6NCM1 817 aa30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 GTF2E1P29083 439 aaPredicted RBP30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 ALDH1B1P30837 517 aa30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 LDHDQ86WU2 507 aa30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 RTKN2Q8IZC4 609 aa30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 TNS4Q8IZW8 715 aa30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 PNISRQ8TF01 805 aaKnown RBP30.37■■■□□ 2.45
CNEP1R1-209ENST00000567712 GPTP24298 496 aa30.36■■■□□ 2.45
CNEP1R1-209ENST00000567712 IARSP41252 1262 aaKnown RBP30.36■■■□□ 2.45
CNEP1R1-209ENST00000567712 FZD9O00144 591 aa30.35■■■□□ 2.45
CNEP1R1-209ENST00000567712 CAPN15O75808 1086 aa30.35■■■□□ 2.45
CNEP1R1-209ENST00000567712 ITGBL1O95965 494 aaPredicted RBP30.35■■■□□ 2.45
CNEP1R1-209ENST00000567712 SUSD4Q5VX71 490 aa30.35■■■□□ 2.45
CNEP1R1-209ENST00000567712 ZBTB3Q9H5J0 574 aa30.35■■■□□ 2.45
CNEP1R1-209ENST00000567712 EAPPQ56P03 285 aaPredicted RBP30.33■■■□□ 2.45
CNEP1R1-209ENST00000567712 C3orf67Q6ZVT6 689 aa30.33■■■□□ 2.45
CNEP1R1-209ENST00000567712 NYXQ9GZU5 481 aa30.33■■■□□ 2.45
CNEP1R1-209ENST00000567712 RNF123Q5XPI4 1314 aa30.32■■■□□ 2.44
CNEP1R1-209ENST00000567712 NEFMP07197 916 aa30.32■■■□□ 2.44
CNEP1R1-209ENST00000567712 HACL1Q9UJ83 578 aa30.32■■■□□ 2.44
CNEP1R1-209ENST00000567712 LTBP1Q14766 1721 aa30.31■■■□□ 2.44
CNEP1R1-209ENST00000567712 KIF6Q6ZMV9 814 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms