RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 ZNF652Q9Y2D9 606 aa19.92■□□□□ 0.78
SCAMP2-209ENST00000567638 RGL2O15211 777 aa19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 NPHP1O15259 732 aa19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 ST5P78524 1137 aa19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 ZNF622Q969S3 477 aaKnown RBP eCLIP19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 THUMPD2Q9BTF0 503 aaKnown RBP19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 ZC3H4Q9UPT8 1303 aaKnown RBP19.9■□□□□ 0.78
SCAMP2-209ENST00000567638 TOMM70O94826 608 aa19.89■□□□□ 0.77
SCAMP2-209ENST00000567638 LMNB1P20700 586 aa19.88■□□□□ 0.77
SCAMP2-209ENST00000567638 PRELPP51888 382 aa19.88■□□□□ 0.77
SCAMP2-209ENST00000567638 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
SCAMP2-209ENST00000567638 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
SCAMP2-209ENST00000567638 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
SCAMP2-209ENST00000567638 NFKBIEO00221 500 aa19.87■□□□□ 0.77
SCAMP2-209ENST00000567638 NBPF5PQ86XG9 351 aaPredicted RBP19.87■□□□□ 0.77
SCAMP2-209ENST00000567638 STYK1Q6J9G0 422 aa19.86■□□□□ 0.77
SCAMP2-209ENST00000567638 NIP7Q9Y221 180 aaKnown RBP eCLIP19.86■□□□□ 0.77
SCAMP2-209ENST00000567638 C21orf2O43822 256 aa19.85■□□□□ 0.77
SCAMP2-209ENST00000567638 SRGNP10124 158 aa19.85■□□□□ 0.77
SCAMP2-209ENST00000567638 CNKSR1Q969H4 720 aa19.85■□□□□ 0.77
SCAMP2-209ENST00000567638 WDR90Q96KV7 1748 aa19.85■□□□□ 0.77
SCAMP2-209ENST00000567638 HLFQ16534 295 aa19.84■□□□□ 0.77
SCAMP2-209ENST00000567638 MASTLQ96GX5 879 aa19.84■□□□□ 0.77
SCAMP2-209ENST00000567638 ZNF219Q9P2Y4 722 aaPredicted RBP19.84■□□□□ 0.77
SCAMP2-209ENST00000567638 RIPK4P57078 832 aa19.83■□□□□ 0.77
SCAMP2-209ENST00000567638 TPTE2Q6XPS3 522 aa19.83■□□□□ 0.77
SCAMP2-209ENST00000567638 C16orf71Q8IYS4 520 aaPredicted RBP19.83■□□□□ 0.77
SCAMP2-209ENST00000567638 RBM46Q8TBY0 533 aaKnown RBP19.83■□□□□ 0.77
SCAMP2-209ENST00000567638 PRPF40BQ6NWY9 871 aaKnown RBP19.82■□□□□ 0.76
SCAMP2-209ENST00000567638 NGEFQ8N5V2 710 aa19.82■□□□□ 0.76
SCAMP2-209ENST00000567638 RRAGCQ9HB90 399 aa19.82■□□□□ 0.76
SCAMP2-209ENST00000567638 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 MAP3K15Q6ZN16 1313 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 LTBP3Q9NS15 1303 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 ANKRD36CQ5JPF3 1778 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 ERVV-1B6SEH8 477 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 TMPOP42166 694 aaKnown RBP19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 LMOD3Q0VAK6 560 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 TSPYL4Q9UJ04 414 aa19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 RRP7AQ9Y3A4 280 aaKnown RBP19.81■□□□□ 0.76
SCAMP2-209ENST00000567638 KLRG2A4D1S0 409 aaPredicted RBP19.8■□□□□ 0.76
SCAMP2-209ENST00000567638 GLTPD2A6NH11 291 aa19.8■□□□□ 0.76
SCAMP2-209ENST00000567638 FAM177BA6PVY3 158 aa19.8■□□□□ 0.76
SCAMP2-209ENST00000567638 MYL6BP14649 208 aa19.8■□□□□ 0.76
SCAMP2-209ENST00000567638 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
SCAMP2-209ENST00000567638 CEP350Q5VT06 3117 aa19.8■□□□□ 0.76
SCAMP2-209ENST00000567638 NPR1P16066 1061 aa19.79■□□□□ 0.76
SCAMP2-209ENST00000567638 APLP1P51693 650 aa19.79■□□□□ 0.76
SCAMP2-209ENST00000567638 SOGA3Q5TF21 947 aa19.79■□□□□ 0.76
SCAMP2-209ENST00000567638 TTLL7Q6ZT98 887 aa19.79■□□□□ 0.76
SCAMP2-209ENST00000567638 TAOK3Q9H2K8 898 aa19.79■□□□□ 0.76
SCAMP2-209ENST00000567638 BABAM1Q9NWV8 329 aa19.79■□□□□ 0.76
SCAMP2-209ENST00000567638 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
SCAMP2-209ENST00000567638 FSTL1Q12841 308 aa19.77■□□□□ 0.76
SCAMP2-209ENST00000567638 NYXQ9GZU5 481 aa19.77■□□□□ 0.76
SCAMP2-209ENST00000567638 ZBTB3Q9H5J0 574 aa19.77■□□□□ 0.76
SCAMP2-209ENST00000567638 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
SCAMP2-209ENST00000567638 IBTKQ9P2D0 1353 aaPredicted RBP19.77■□□□□ 0.76
SCAMP2-209ENST00000567638 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
SCAMP2-209ENST00000567638 GTF2E1P29083 439 aaPredicted RBP19.76■□□□□ 0.75
SCAMP2-209ENST00000567638 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
SCAMP2-209ENST00000567638 ERFEQ4G0M1 354 aa19.76■□□□□ 0.75
SCAMP2-209ENST00000567638 C7orf43Q8WVR3 580 aa19.76■□□□□ 0.75
SCAMP2-209ENST00000567638 VEGFAP15692 232 aaPredicted RBP19.75■□□□□ 0.75
SCAMP2-209ENST00000567638 CCDC93Q567U6 631 aa19.75■□□□□ 0.75
SCAMP2-209ENST00000567638 RUNDC1Q96C34 613 aa19.75■□□□□ 0.75
SCAMP2-209ENST00000567638 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
SCAMP2-209ENST00000567638 NEUROD2Q15784 382 aa19.74■□□□□ 0.75
SCAMP2-209ENST00000567638 DPY19L2Q6NUT2 758 aa19.74■□□□□ 0.75
SCAMP2-209ENST00000567638 GIGYF2Q6Y7W6 1299 aaKnown RBP19.74■□□□□ 0.75
SCAMP2-209ENST00000567638 LRP10Q7Z4F1 713 aa19.74■□□□□ 0.75
SCAMP2-209ENST00000567638 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
SCAMP2-209ENST00000567638 LAMB2P55268 1798 aa19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 GPTP24298 496 aa19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 PDIA6Q15084 440 aa19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 PRKRIP1Q9H875 184 aaPredicted RBP19.73■□□□□ 0.75
SCAMP2-209ENST00000567638 SCN4AP35499 1836 aa19.72■□□□□ 0.75
SCAMP2-209ENST00000567638 ZNF34Q8IZ26 560 aa19.72■□□□□ 0.75
SCAMP2-209ENST00000567638 ADAMTS8Q9UP79 889 aa19.72■□□□□ 0.75
SCAMP2-209ENST00000567638 TRIM35Q9UPQ4 493 aa19.72■□□□□ 0.75
SCAMP2-209ENST00000567638 POTECB2RU33 542 aa19.71■□□□□ 0.75
SCAMP2-209ENST00000567638 ALDH1B1P30837 517 aa19.71■□□□□ 0.75
SCAMP2-209ENST00000567638 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
SCAMP2-209ENST00000567638 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
SCAMP2-209ENST00000567638 CHL1O00533 1208 aa19.7■□□□□ 0.74
SCAMP2-209ENST00000567638 NTSR2O95665 410 aa19.7■□□□□ 0.74
SCAMP2-209ENST00000567638 ANXA1P04083 346 aa19.7■□□□□ 0.74
SCAMP2-209ENST00000567638 FKBP4Q02790 459 aaKnown RBP eCLIP19.7■□□□□ 0.74
SCAMP2-209ENST00000567638 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
SCAMP2-209ENST00000567638 SNED1Q8TER0 1413 aa19.69■□□□□ 0.74
SCAMP2-209ENST00000567638 RTKN2Q8IZC4 609 aa19.69■□□□□ 0.74
SCAMP2-209ENST00000567638 DNAJC5GQ8N7S2 189 aa19.69■□□□□ 0.74
SCAMP2-209ENST00000567638 PARP10Q53GL7 1025 aa19.68■□□□□ 0.74
SCAMP2-209ENST00000567638 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
SCAMP2-209ENST00000567638 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
SCAMP2-209ENST00000567638 DDNO94850 711 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms