RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SOS1Q07889 1333 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-216ENST00000567071 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-216ENST00000567071 TJP1Q07157 1748 aa13.55□□□□□ -0.24
CAPN3-216ENST00000567071 COL15A1P39059 1388 aa13.55□□□□□ -0.24
CAPN3-216ENST00000567071 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
CAPN3-216ENST00000567071 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
CAPN3-216ENST00000567071 ARFGEF2Q9Y6D5 1785 aa13.54□□□□□ -0.24
CAPN3-216ENST00000567071 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
CAPN3-216ENST00000567071 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
CAPN3-216ENST00000567071 TRAF5O00463 557 aa13.53□□□□□ -0.24
CAPN3-216ENST00000567071 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-216ENST00000567071 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
CAPN3-216ENST00000567071 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
CAPN3-216ENST00000567071 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
CAPN3-216ENST00000567071 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
CAPN3-216ENST00000567071 FYB1O15117 783 aa13.52□□□□□ -0.25
CAPN3-216ENST00000567071 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
CAPN3-216ENST00000567071 JDP2Q8WYK2 163 aa13.52□□□□□ -0.25
CAPN3-216ENST00000567071 ZNF277Q9NRM2 450 aaPredicted RBP13.52□□□□□ -0.25
CAPN3-216ENST00000567071 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
CAPN3-216ENST00000567071 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
CAPN3-216ENST00000567071 FXR1P51114 621 aaKnown RBP eCLIP13.51□□□□□ -0.25
CAPN3-216ENST00000567071 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
CAPN3-216ENST00000567071 USP50Q70EL3 339 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-216ENST00000567071 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
CAPN3-216ENST00000567071 MASTLQ96GX5 879 aa13.51□□□□□ -0.25
CAPN3-216ENST00000567071 EYA1Q99502 592 aa13.51□□□□□ -0.25
CAPN3-216ENST00000567071 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
CAPN3-216ENST00000567071 FZD9O00144 591 aa13.5□□□□□ -0.25
CAPN3-216ENST00000567071 ST5P78524 1137 aa13.5□□□□□ -0.25
CAPN3-216ENST00000567071 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-216ENST00000567071 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
CAPN3-216ENST00000567071 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
CAPN3-216ENST00000567071 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
CAPN3-216ENST00000567071 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
CAPN3-216ENST00000567071 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
CAPN3-216ENST00000567071 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
CAPN3-216ENST00000567071 PKN2Q16513 984 aaKnown RBP13.49□□□□□ -0.25
CAPN3-216ENST00000567071 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-216ENST00000567071 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
CAPN3-216ENST00000567071 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
CAPN3-216ENST00000567071 SLC17A8Q8NDX2 589 aa13.49□□□□□ -0.25
CAPN3-216ENST00000567071 BCL2L12Q9HB09 334 aa13.49□□□□□ -0.25
CAPN3-216ENST00000567071 A0A087WZG4 1122 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 SRGNP10124 158 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 MTHFSP49914 203 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-216ENST00000567071 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 CARD11Q9BXL7 1154 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 ZNF408Q9H9D4 720 aa13.48□□□□□ -0.25
CAPN3-216ENST00000567071 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
CAPN3-216ENST00000567071 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
CAPN3-216ENST00000567071 TRPA1O75762 1119 aa13.46□□□□□ -0.25
CAPN3-216ENST00000567071 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-216ENST00000567071 EPS15P42566 896 aa13.46□□□□□ -0.25
CAPN3-216ENST00000567071 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
CAPN3-216ENST00000567071 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
CAPN3-216ENST00000567071 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
CAPN3-216ENST00000567071 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
CAPN3-216ENST00000567071 HDAC9Q9UKV0 1011 aa13.45□□□□□ -0.26
CAPN3-216ENST00000567071 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
CAPN3-216ENST00000567071 HUNKP57058 714 aa13.44□□□□□ -0.26
CAPN3-216ENST00000567071 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
CAPN3-216ENST00000567071 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
CAPN3-216ENST00000567071 C7orf43Q8WVR3 580 aa13.44□□□□□ -0.26
CAPN3-216ENST00000567071 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
CAPN3-216ENST00000567071 ADARB2Q9NS39 739 aaKnown RBP13.44□□□□□ -0.26
CAPN3-216ENST00000567071 NPR1P16066 1061 aa13.43□□□□□ -0.26
CAPN3-216ENST00000567071 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
CAPN3-216ENST00000567071 SCNN1DP51172 638 aa13.43□□□□□ -0.26
CAPN3-216ENST00000567071 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
CAPN3-216ENST00000567071 CCDC102AQ96A19 550 aa13.42□□□□□ -0.26
CAPN3-216ENST00000567071 ZIC5Q96T25 663 aa13.42□□□□□ -0.26
CAPN3-216ENST00000567071 GLIS2Q9BZE0 524 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-216ENST00000567071 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
CAPN3-216ENST00000567071 A0A0C4DFX4 3053 aa13.41□□□□□ -0.26
CAPN3-216ENST00000567071 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
CAPN3-216ENST00000567071 STARD3NLO95772 234 aa13.4□□□□□ -0.26
CAPN3-216ENST00000567071 KIF23Q02241 960 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-216ENST00000567071 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
CAPN3-216ENST00000567071 PSMD1Q99460 953 aa13.4□□□□□ -0.26
CAPN3-216ENST00000567071 ALDH1B1P30837 517 aa13.39□□□□□ -0.27
CAPN3-216ENST00000567071 CDC37L1Q7L3B6 337 aa13.39□□□□□ -0.27
CAPN3-216ENST00000567071 LARGE2Q8N3Y3 721 aa13.39□□□□□ -0.27
CAPN3-216ENST00000567071 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-216ENST00000567071 CEP290O15078 2479 aa13.39□□□□□ -0.27
CAPN3-216ENST00000567071 SCN11AQ9UI33 1791 aa13.38□□□□□ -0.27
CAPN3-216ENST00000567071 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-216ENST00000567071 ZC3H15Q8WU90 426 aaKnown RBP13.38□□□□□ -0.27
CAPN3-216ENST00000567071 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-216ENST00000567071 EIF5P55010 431 aaKnown RBP13.37□□□□□ -0.27
CAPN3-216ENST00000567071 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
CAPN3-216ENST00000567071 FBXO46Q6PJ61 603 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-216ENST00000567071 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
CAPN3-216ENST00000567071 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-216ENST00000567071 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
CAPN3-216ENST00000567071 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
CAPN3-216ENST00000567071 C2orf69Q8N8R5 385 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms