RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 PDRG1Q9NUG6 133 aa29.64■■■□□ 2.34
FANCA-221ENST00000566889 ZNF215Q9UL58 517 aaPredicted RBP29.64■■■□□ 2.34
FANCA-221ENST00000566889 ALKQ9UM73 1620 aa29.64■■■□□ 2.34
FANCA-221ENST00000566889 LARP6Q9BRS8 491 aaKnown RBP29.64■■■□□ 2.33
FANCA-221ENST00000566889 SOS1Q07889 1333 aaPredicted RBP29.63■■■□□ 2.33
FANCA-221ENST00000566889 NPHP3Q7Z494 1330 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 PDCP20941 246 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 LRRC8AQ8IWT6 810 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 ZNF592Q92610 1267 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 DACT1Q9NYF0 836 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 TMEM131LA2VDJ0 1609 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 ZNF165P49910 485 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 SARM1Q6SZW1 724 aa29.63■■■□□ 2.33
FANCA-221ENST00000566889 GOLGA6L4A6NEF3 574 aa29.62■■■□□ 2.33
FANCA-221ENST00000566889 KIF2AO00139 706 aaPredicted RBP29.62■■■□□ 2.33
FANCA-221ENST00000566889 RRS1Q15050 365 aaKnown RBP29.62■■■□□ 2.33
FANCA-221ENST00000566889 SULT6B1Q6IMI4 303 aa29.62■■■□□ 2.33
FANCA-221ENST00000566889 PI4K2BQ8TCG2 481 aa29.62■■■□□ 2.33
FANCA-221ENST00000566889 TULP2O00295 520 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 ZBTB22O15209 634 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 CKAP2LQ8IYA6 745 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 STK31Q9BXU1 1019 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 ADGRL3Q9HAR2 1447 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 FBXO38Q6PIJ6 1188 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 KIF1BPQ96EK5 621 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 TSPYL1Q9H0U9 437 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 ZSWIM6Q9HCJ5 1215 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 KCND1Q9NSA2 647 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 CYP46A1Q9Y6A2 500 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 MYO5BQ9ULV0 1848 aa29.61■■■□□ 2.33
FANCA-221ENST00000566889 LARP1BQ659C4 914 aaKnown RBP29.6■■■□□ 2.33
FANCA-221ENST00000566889 MRFAP1L1Q96HT8 127 aa29.6■■■□□ 2.33
FANCA-221ENST00000566889 SLU7O95391 586 aaKnown RBP29.59■■■□□ 2.33
FANCA-221ENST00000566889 CCDC144BQ3MJ40 725 aa29.59■■■□□ 2.33
FANCA-221ENST00000566889 CCDC144CPQ8IYA2 1237 aa29.59■■■□□ 2.33
FANCA-221ENST00000566889 KCNB2Q92953 911 aa29.59■■■□□ 2.33
FANCA-221ENST00000566889 PPP6R1Q9UPN7 881 aa29.59■■■□□ 2.33
FANCA-221ENST00000566889 BMS1Q14692 1282 aaKnown RBP29.58■■■□□ 2.33
FANCA-221ENST00000566889 SSH3Q8TE77 659 aa29.58■■■□□ 2.33
FANCA-221ENST00000566889 RUFY2Q8WXA3 655 aa29.58■■■□□ 2.33
FANCA-221ENST00000566889 LRRFIP2Q9Y608 721 aaKnown RBP29.58■■■□□ 2.33
FANCA-221ENST00000566889 NUTM1Q86Y26 1132 aa29.57■■■□□ 2.32
FANCA-221ENST00000566889 IL1RAPL2Q9NP60 686 aa29.57■■■□□ 2.32
FANCA-221ENST00000566889 ZRANB1Q9UGI0 708 aa29.57■■■□□ 2.32
FANCA-221ENST00000566889 CHMP3Q9Y3E7 222 aa29.57■■■□□ 2.32
FANCA-221ENST00000566889 XRN1Q8IZH2 1706 aaKnown RBP29.57■■■□□ 2.32
FANCA-221ENST00000566889 EIF4A2Q14240 407 aaKnown RBP29.57■■■□□ 2.32
FANCA-221ENST00000566889 JAKMIP1Q96N16 626 aaKnown RBP29.57■■■□□ 2.32
FANCA-221ENST00000566889 TTC21BQ7Z4L5 1316 aa29.57■■■□□ 2.32
FANCA-221ENST00000566889 ITSN1Q15811 1721 aa29.56■■■□□ 2.32
FANCA-221ENST00000566889 TSPYL4Q9UJ04 414 aa29.56■■■□□ 2.32
FANCA-221ENST00000566889 ST3GAL1Q11201 340 aa29.56■■■□□ 2.32
FANCA-221ENST00000566889 SPATA32Q96LK8 384 aa29.56■■■□□ 2.32
FANCA-221ENST00000566889 CRYBG1Q9Y4K1 1723 aa29.56■■■□□ 2.32
FANCA-221ENST00000566889 N4BP2Q86UW6 1770 aaPredicted RBP29.55■■■□□ 2.32
FANCA-221ENST00000566889 PXDNLA1KZ92 1463 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 CPA1P15085 419 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 FLIIQ13045 1269 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 ELF2Q15723 593 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
FANCA-221ENST00000566889 GOLGA6L19H0YKK7 550 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 ME3Q16798 604 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 NOL10Q9BSC4 688 aaKnown RBP29.55■■■□□ 2.32
FANCA-221ENST00000566889 DNAJC25Q9H1X3 360 aa29.55■■■□□ 2.32
FANCA-221ENST00000566889 HTATSF1O43719 755 aaKnown RBP29.54■■■□□ 2.32
FANCA-221ENST00000566889 MAP4K4O95819 1239 aaPredicted RBP29.54■■■□□ 2.32
FANCA-221ENST00000566889 CYP2C19P33261 490 aa29.54■■■□□ 2.32
FANCA-221ENST00000566889 SKILP12757 684 aa29.53■■■□□ 2.32
FANCA-221ENST00000566889 CWC27Q6UX04 472 aaKnown RBP29.53■■■□□ 2.32
FANCA-221ENST00000566889 CDC37L1Q7L3B6 337 aa29.53■■■□□ 2.32
FANCA-221ENST00000566889 MON2Q7Z3U7 1717 aa29.53■■■□□ 2.32
FANCA-221ENST00000566889 SENP3Q9H4L4 574 aaPredicted RBP29.53■■■□□ 2.32
FANCA-221ENST00000566889 RHPN1Q8TCX5 695 aa29.52■■■□□ 2.32
FANCA-221ENST00000566889 SPG7Q9UQ90 795 aa29.52■■■□□ 2.32
FANCA-221ENST00000566889 ERICH4A6NGS2 130 aa29.52■■■□□ 2.32
FANCA-221ENST00000566889 USP27XA6NNY8 438 aa29.52■■■□□ 2.32
FANCA-221ENST00000566889 VGLL3A8MV65 326 aa29.52■■■□□ 2.32
FANCA-221ENST00000566889 LEO1Q8WVC0 666 aaPredicted RBP29.52■■■□□ 2.32
FANCA-221ENST00000566889 MAP3K5Q99683 1374 aa29.52■■■□□ 2.32
FANCA-221ENST00000566889 UBTFL1P0CB47 393 aaPredicted RBP29.51■■■□□ 2.31
FANCA-221ENST00000566889 CCDC30Q5VVM6 783 aa29.51■■■□□ 2.31
FANCA-221ENST00000566889 CPS1P31327 1500 aa29.51■■■□□ 2.31
FANCA-221ENST00000566889 USP42Q9H9J4 1324 aaKnown RBP29.51■■■□□ 2.31
FANCA-221ENST00000566889 H2AFXP16104 143 aaPredicted RBP29.51■■■□□ 2.31
FANCA-221ENST00000566889 CCAR2Q8N163 923 aaKnown RBP29.51■■■□□ 2.31
FANCA-221ENST00000566889 POLA2Q14181 598 aa29.5■■■□□ 2.31
FANCA-221ENST00000566889 IQCB1Q15051 598 aa29.5■■■□□ 2.31
FANCA-221ENST00000566889 ADCK5Q3MIX3 580 aa29.5■■■□□ 2.31
FANCA-221ENST00000566889 ZKSCAN1P17029 563 aaPredicted RBP29.49■■■□□ 2.31
FANCA-221ENST00000566889 ZNF446Q9NWS9 450 aa29.49■■■□□ 2.31
FANCA-221ENST00000566889 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.49■■■□□ 2.319e-7■□□□□ 10
FANCA-221ENST00000566889 V9GYY5 206 aaPredicted RBP29.49■■■□□ 2.31
FANCA-221ENST00000566889 ERBB3P21860 1342 aa29.49■■■□□ 2.31
FANCA-221ENST00000566889 SURF6O75683 361 aaKnown RBP29.49■■■□□ 2.31
FANCA-221ENST00000566889 FERMT3Q86UX7 667 aa29.49■■■□□ 2.31
FANCA-221ENST00000566889 MIS18AQ9NYP9 233 aa29.49■■■□□ 2.31
FANCA-221ENST00000566889 TTC41PQ6P2S7 1318 aa29.48■■■□□ 2.31
FANCA-221ENST00000566889 GIGYF1O75420 1035 aaPredicted RBP29.48■■■□□ 2.31
FANCA-221ENST00000566889 PRPF40BQ6NWY9 871 aaKnown RBP29.48■■■□□ 2.31
FANCA-221ENST00000566889 USP44Q9H0E7 712 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms