RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
KLHDC4-216ENST00000566561 PCNTO95613 3336 aa16.27■□□□□ 0.19
KLHDC4-216ENST00000566561 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 NBPF26B4DH59 902 aa16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 NBPF10Q6P3W6 841 aaKnown RBP16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 NBPF15Q8N660 670 aa16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
KLHDC4-216ENST00000566561 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
KLHDC4-216ENST00000566561 C2CD5Q86YS7 1000 aa16.25■□□□□ 0.19
KLHDC4-216ENST00000566561 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
KLHDC4-216ENST00000566561 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
KLHDC4-216ENST00000566561 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
KLHDC4-216ENST00000566561 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
KLHDC4-216ENST00000566561 H0YIN7 160 aa16.24■□□□□ 0.19
KLHDC4-216ENST00000566561 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
KLHDC4-216ENST00000566561 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
KLHDC4-216ENST00000566561 PDE6BP35913 854 aa16.23■□□□□ 0.19
KLHDC4-216ENST00000566561 PRR5LQ6MZQ0 368 aa16.23■□□□□ 0.19
KLHDC4-216ENST00000566561 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
KLHDC4-216ENST00000566561 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
KLHDC4-216ENST00000566561 SCN7AQ01118 1682 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 CAPN15O75808 1086 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 MYL6BP14649 208 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 ST5P78524 1137 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 RASSF7Q02833 373 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
KLHDC4-216ENST00000566561 LMNB1P20700 586 aa16.21■□□□□ 0.19
KLHDC4-216ENST00000566561 NBPF5PQ86XG9 351 aaPredicted RBP16.21■□□□□ 0.19
KLHDC4-216ENST00000566561 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.19
KLHDC4-216ENST00000566561 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
KLHDC4-216ENST00000566561 NIP7Q9Y221 180 aaKnown RBP eCLIP16.21■□□□□ 0.19
KLHDC4-216ENST00000566561 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
KLHDC4-216ENST00000566561 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
KLHDC4-216ENST00000566561 DLG5Q8TDM6 1919 aa16.2■□□□□ 0.18
KLHDC4-216ENST00000566561 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
KLHDC4-216ENST00000566561 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
KLHDC4-216ENST00000566561 EIF2S2P20042 333 aaKnown RBP16.19■□□□□ 0.18
KLHDC4-216ENST00000566561 HLFQ16534 295 aa16.19■□□□□ 0.18
KLHDC4-216ENST00000566561 KIF6Q6ZMV9 814 aa16.19■□□□□ 0.18
KLHDC4-216ENST00000566561 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 GLTPD2A6NH11 291 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 RGL2O15211 777 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 TPTE2Q6XPS3 522 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
KLHDC4-216ENST00000566561 ERVV-1B6SEH8 477 aa16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 GTF2E1P29083 439 aaPredicted RBP16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 PRELPP51888 382 aa16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 TTLL7Q6ZT98 887 aa16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
KLHDC4-216ENST00000566561 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
KLHDC4-216ENST00000566561 CHL1O00533 1208 aa16.16■□□□□ 0.18
KLHDC4-216ENST00000566561 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
KLHDC4-216ENST00000566561 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
KLHDC4-216ENST00000566561 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
KLHDC4-216ENST00000566561 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
KLHDC4-216ENST00000566561 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
KLHDC4-216ENST00000566561 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
KLHDC4-216ENST00000566561 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
KLHDC4-216ENST00000566561 APAF1O14727 1248 aa16.14■□□□□ 0.17
KLHDC4-216ENST00000566561 C21orf2O43822 256 aa16.14■□□□□ 0.17
KLHDC4-216ENST00000566561 SRGNP10124 158 aa16.14■□□□□ 0.17
KLHDC4-216ENST00000566561 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
KLHDC4-216ENST00000566561 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
KLHDC4-216ENST00000566561 GPTP24298 496 aa16.13■□□□□ 0.17
KLHDC4-216ENST00000566561 PDIA6Q15084 440 aa16.13■□□□□ 0.17
KLHDC4-216ENST00000566561 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
KLHDC4-216ENST00000566561 MASTLQ96GX5 879 aa16.13■□□□□ 0.17
KLHDC4-216ENST00000566561 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
KLHDC4-216ENST00000566561 ANP32CO43423 234 aa16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 ANXA1P04083 346 aa16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 NPR1P16066 1061 aa16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 DPY19L2Q6NUT2 758 aa16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
KLHDC4-216ENST00000566561 NFKBIEO00221 500 aa16.11■□□□□ 0.17
KLHDC4-216ENST00000566561 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
KLHDC4-216ENST00000566561 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
KLHDC4-216ENST00000566561 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
KLHDC4-216ENST00000566561 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
KLHDC4-216ENST00000566561 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
KLHDC4-216ENST00000566561 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
KLHDC4-216ENST00000566561 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
KLHDC4-216ENST00000566561 SCN4AP35499 1836 aa16.1■□□□□ 0.17
KLHDC4-216ENST00000566561 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 SUSD4Q5VX71 490 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms