RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ZNF330Q9Y3S2 320 aaPredicted RBP14.77□□□□□ -0.05
KARS-207ENST00000566560 CASZ1Q86V15 1759 aa14.77□□□□□ -0.05
KARS-207ENST00000566560 PHF14O94880 888 aa14.76□□□□□ -0.05
KARS-207ENST00000566560 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
KARS-207ENST00000566560 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
KARS-207ENST00000566560 CHPF2Q9P2E5 772 aa14.76□□□□□ -0.05
KARS-207ENST00000566560 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
KARS-207ENST00000566560 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
KARS-207ENST00000566560 VAMP4O75379 141 aa14.75□□□□□ -0.05
KARS-207ENST00000566560 SSFA2P28290 1259 aa14.75□□□□□ -0.05
KARS-207ENST00000566560 CCDC30Q5VVM6 783 aa14.75□□□□□ -0.05
KARS-207ENST00000566560 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
KARS-207ENST00000566560 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
KARS-207ENST00000566560 PNPLA7Q6ZV29 1317 aa14.74□□□□□ -0.05
KARS-207ENST00000566560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
KARS-207ENST00000566560 RPS6KA4O75676 772 aa14.74□□□□□ -0.05
KARS-207ENST00000566560 CT47B1P0C2W7 299 aaPredicted RBP14.74□□□□□ -0.05
KARS-207ENST00000566560 MYL6BP14649 208 aa14.74□□□□□ -0.05
KARS-207ENST00000566560 IL6STP40189 918 aaPredicted RBP14.74□□□□□ -0.05
KARS-207ENST00000566560 PROSER3Q2NL68 480 aa14.74□□□□□ -0.05
KARS-207ENST00000566560 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
KARS-207ENST00000566560 AMIGO3Q86WK7 504 aa14.74□□□□□ -0.05
KARS-207ENST00000566560 STK31Q9BXU1 1019 aa14.74□□□□□ -0.05
KARS-207ENST00000566560 DBF4Q9UBU7 674 aaPredicted RBP14.74□□□□□ -0.05
KARS-207ENST00000566560 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
KARS-207ENST00000566560 ANXA1P04083 346 aa14.73□□□□□ -0.05
KARS-207ENST00000566560 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
KARS-207ENST00000566560 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
KARS-207ENST00000566560 ARFGEF2Q9Y6D5 1785 aa14.73□□□□□ -0.05
KARS-207ENST00000566560 EIF5P55010 431 aaKnown RBP14.72□□□□□ -0.05
KARS-207ENST00000566560 R3HDM1Q15032 1099 aaKnown RBP14.72□□□□□ -0.05
KARS-207ENST00000566560 PDIA6Q15084 440 aa14.72□□□□□ -0.05
KARS-207ENST00000566560 FLAD1Q8NFF5 587 aa14.72□□□□□ -0.05
KARS-207ENST00000566560 A0A087WZG4 1122 aa14.71□□□□□ -0.05
KARS-207ENST00000566560 PSDA5PKW4 1024 aaPredicted RBP14.71□□□□□ -0.05
KARS-207ENST00000566560 CHRM1P11229 460 aaPredicted RBP14.71□□□□□ -0.05
KARS-207ENST00000566560 TRAPPC3LQ5T215 181 aa14.71□□□□□ -0.05
KARS-207ENST00000566560 ZNF428Q96B54 188 aa14.71□□□□□ -0.05
KARS-207ENST00000566560 HYPKQ9NX55 129 aa14.71□□□□□ -0.05
KARS-207ENST00000566560 ANKRD36CQ5JPF3 1778 aa14.7□□□□□ -0.06
KARS-207ENST00000566560 LRP10Q7Z4F1 713 aa14.7□□□□□ -0.06
KARS-207ENST00000566560 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
KARS-207ENST00000566560 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
KARS-207ENST00000566560 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
KARS-207ENST00000566560 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
KARS-207ENST00000566560 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
KARS-207ENST00000566560 RGL2O15211 777 aa14.69□□□□□ -0.06
KARS-207ENST00000566560 RFC4P35249 363 aa14.69□□□□□ -0.06
KARS-207ENST00000566560 KIF6Q6ZMV9 814 aa14.69□□□□□ -0.06
KARS-207ENST00000566560 SSH1Q8WYL5 1049 aa14.69□□□□□ -0.06
KARS-207ENST00000566560 ARHGEF1Q92888 912 aaKnown RBP14.69□□□□□ -0.06
KARS-207ENST00000566560 ARXQ96QS3 562 aa14.69□□□□□ -0.06
KARS-207ENST00000566560 NUP98P52948 1817 aa14.69□□□□□ -0.06
KARS-207ENST00000566560 AIMP1Q12904 312 aaKnown RBP14.68□□□□□ -0.06
KARS-207ENST00000566560 ALDH1L2Q3SY69 923 aa14.68□□□□□ -0.06
KARS-207ENST00000566560 XAGE3Q8WTP9 111 aa14.68□□□□□ -0.06
KARS-207ENST00000566560 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
KARS-207ENST00000566560 ZPR1O75312 459 aa14.67□□□□□ -0.06
KARS-207ENST00000566560 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
KARS-207ENST00000566560 RARSP54136 660 aaKnown RBP14.67□□□□□ -0.06
KARS-207ENST00000566560 FLIIQ13045 1269 aa14.67□□□□□ -0.06
KARS-207ENST00000566560 TTLL7Q6ZT98 887 aa14.67□□□□□ -0.06
KARS-207ENST00000566560 COPS6Q7L5N1 327 aa14.67□□□□□ -0.06
KARS-207ENST00000566560 PDGFDQ9GZP0 370 aaPredicted RBP14.67□□□□□ -0.06
KARS-207ENST00000566560 PHAXQ9H814 394 aaKnown RBP14.67□□□□□ -0.06
KARS-207ENST00000566560 NARFQ9UHQ1 456 aa14.67□□□□□ -0.06
KARS-207ENST00000566560 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
KARS-207ENST00000566560 MAP3K15Q6ZN16 1313 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 COL24A1Q17RW2 1714 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 N4BP2Q86UW6 1770 aaPredicted RBP14.66□□□□□ -0.06
KARS-207ENST00000566560 CAMTA2O94983 1202 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 PYGBP11216 843 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 USPL1Q5W0Q7 1092 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 G2E3Q7L622 706 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
KARS-207ENST00000566560 ZBTB3Q9H5J0 574 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 KIF16BQ96L93 1317 aa14.66□□□□□ -0.06
KARS-207ENST00000566560 AFDNP55196 1824 aaKnown RBP14.65□□□□□ -0.06
KARS-207ENST00000566560 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
KARS-207ENST00000566560 C19orf67A6NJJ6 358 aa14.64□□□□□ -0.07
KARS-207ENST00000566560 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
KARS-207ENST00000566560 GYS1P13807 737 aa14.64□□□□□ -0.07
KARS-207ENST00000566560 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
KARS-207ENST00000566560 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
KARS-207ENST00000566560 RCAN3Q9UKA8 241 aa14.64□□□□□ -0.07
KARS-207ENST00000566560 ATP10DQ9P241 1426 aa14.64□□□□□ -0.07
KARS-207ENST00000566560 ADCY9O60503 1353 aa14.63□□□□□ -0.07
KARS-207ENST00000566560 ERVV-1B6SEH8 477 aa14.63□□□□□ -0.07
KARS-207ENST00000566560 POTEHQ6S545 545 aa14.63□□□□□ -0.07
KARS-207ENST00000566560 PLBD2Q8NHP8 589 aa14.63□□□□□ -0.07
KARS-207ENST00000566560 SLC16A10Q8TF71 515 aa14.63□□□□□ -0.07
KARS-207ENST00000566560 PTPRCP08575 1304 aa14.63□□□□□ -0.07
KARS-207ENST00000566560 BCAR3O75815 825 aa14.62□□□□□ -0.07
KARS-207ENST00000566560 ZBTB7AO95365 584 aa14.62□□□□□ -0.07
KARS-207ENST00000566560 BRPF1P55201 1214 aaPredicted RBP14.62□□□□□ -0.07
KARS-207ENST00000566560 ANKRD13DQ6ZTN6 518 aa14.62□□□□□ -0.07
KARS-207ENST00000566560 RIC3Q7Z5B4 369 aa14.62□□□□□ -0.07
KARS-207ENST00000566560 MTFR1LQ9H019 292 aa14.62□□□□□ -0.07
KARS-207ENST00000566560 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
KARS-207ENST00000566560 PXDNLA1KZ92 1463 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms