RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SCO2A0A1W2PP80 73 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 C1QTNF9BB2RNN3 333 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 GNB5O14775 395 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 FAM69CQ0P6D2 419 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 POU4F2Q12837 409 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 DPYDQ12882 1025 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 PTK7Q13308 1070 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 ANKMY2Q8IV38 441 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 PLEKHM2Q8IWE5 1019 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 ANKRD13AQ8IZ07 590 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 SEMA6BQ9H3T3 888 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 TIMMDC1Q9NPL8 285 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 CYLDQ9NQC7 956 aa4.86□□□□□ -1.63
HERPUD1-211ENST00000566550 VAMP1P23763 118 aa4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 COL8A1P27658 744 aa4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 GTF2E1P29083 439 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 NBPF10Q6P3W6 841 aaKnown RBP4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 FBXO33Q7Z6M2 555 aa4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 NBPF15Q8N660 670 aa4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 KDF1Q8NAX2 398 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 NFATC2IPQ8NCF5 419 aa4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 KLRG1Q96E93 195 aa4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 DNAJC2Q99543 621 aaKnown RBP4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 CDCA7Q9BWT1 371 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-211ENST00000566550 A0A1W2PRU2 124 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 ZBBXA8MT70 800 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 ESPNB1AK53 854 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 SHISA8B8ZZ34 492 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 LGR5O75473 907 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 SLFNL1Q499Z3 407 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 GIMAP6Q6P9H5 292 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 DPH6Q7L8W6 267 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 TAS1R3Q7RTX0 852 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 KRTAP1-3Q8IUG1 177 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 PGBD3Q8N328 593 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 PRIMPOLQ96LW4 560 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 MKNK1Q9BUB5 465 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 HIRIP3Q9BW71 556 aaPredicted RBP4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 TANGO6Q9C0B7 1094 aa4.84□□□□□ -1.63
HERPUD1-211ENST00000566550 ARID4BQ4LE39 1312 aaPredicted RBP4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 BTBD11A6QL63 1104 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 BMP4P12644 408 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 DOC2BQ14184 412 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 LBRQ14739 615 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 EAPPQ56P03 285 aaPredicted RBP4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 NBPF11Q86T75 865 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 RNF135Q8IUD6 432 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 ZSCAN29Q8IWY8 852 aaPredicted RBP4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 OGFOD1Q8N543 542 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 BACH2Q9BYV9 841 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 GRIP2Q9C0E4 1043 aa4.83□□□□□ -1.64
HERPUD1-211ENST00000566550 SPATA31C2B4DYI2 1134 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 WASLO00401 505 aaPredicted RBP4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 GATA4P43694 442 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 HDLBPQ00341 1268 aaKnown RBP4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 MTMR3Q13615 1198 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 SWI5Q1ZZU3 235 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 RNF20Q5VTR2 975 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 LINC00114Q6XXX2 140 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 CYP2U1Q7Z449 544 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 CD163Q86VB7 1156 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 PLPP7Q8NBV4 271 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 ASB16Q96NS5 453 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 DCTN4Q9UJW0 460 aa4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 IQSEC3Q9UPP2 1182 aaPredicted RBP4.82□□□□□ -1.64
HERPUD1-211ENST00000566550 ICMTO60725 284 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 EML3Q32P44 896 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 EFHC2Q5JST6 749 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 CC2D2BQ6DHV5 1058 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 SLCO4C1Q6ZQN7 724 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 ZNF592Q92610 1267 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 SUV39H2Q9H5I1 410 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 DNAAF2Q9NVR5 837 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 ATXN7L1Q9ULK2 861 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 RBM19Q9Y4C8 960 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 PCDHB9Q9Y5E1 797 aa4.81□□□□□ -1.64
HERPUD1-211ENST00000566550 CADPSQ9ULU8 1353 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 A0A1B0GTH6 734 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 SCAMP3O14828 347 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 C21orf2O43822 256 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 CLDN10P78369 228 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 PSME1Q06323 249 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 CLN3Q13286 438 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 ZNF662Q6ZS27 426 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 GTF3C2Q8WUA4 911 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 PIK3R5Q8WYR1 880 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 DHX38Q92620 1227 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 BTBD6Q96KE9 485 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 FAM161BQ96MY7 647 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 OCSTAMPQ9BR26 566 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 CXXC1Q9P0U4 656 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 SEPT3Q9UH03 358 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 EGFL7Q9UHF1 273 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 BRPF3Q9ULD4 1205 aa4.8□□□□□ -1.64
HERPUD1-211ENST00000566550 P4HBP07237 508 aaKnown RBP4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 GTF2F1P35269 517 aaKnown RBP eCLIP4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 CHRNA4P43681 627 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 C1orf229Q6ZS94 237 aaPredicted RBP4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 NOL8Q76FK4 1167 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms