RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
CDH1-209ENST00000566510 PTH1RQ03431 593 aa17.11■□□□□ 0.33
CDH1-209ENST00000566510 IP6K1Q92551 441 aa17.11■□□□□ 0.33
CDH1-209ENST00000566510 PHF8Q9UPP1 1060 aa17.11■□□□□ 0.33
CDH1-209ENST00000566510 LARGE1O95461 756 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 PSME1Q06323 249 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
CDH1-209ENST00000566510 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 CCDC183Q5T5S1 534 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 FAM13BQ9NYF5 915 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 USP25Q9UHP3 1055 aa17.1■□□□□ 0.33
CDH1-209ENST00000566510 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
CDH1-209ENST00000566510 MCM5P33992 734 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
CDH1-209ENST00000566510 TTC41PQ6P2S7 1318 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 F13A1P00488 732 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
CDH1-209ENST00000566510 GJB2P29033 226 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 AACSQ86V21 672 aa17.09■□□□□ 0.33
CDH1-209ENST00000566510 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.33
CDH1-209ENST00000566510 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.33
CDH1-209ENST00000566510 LMOD2Q6P5Q4 547 aa17.08■□□□□ 0.33
CDH1-209ENST00000566510 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.33
CDH1-209ENST00000566510 ZNF830Q96NB3 372 aaPredicted RBP17.08■□□□□ 0.33
CDH1-209ENST00000566510 HYPKQ9NX55 129 aa17.08■□□□□ 0.33
CDH1-209ENST00000566510 ATP6V1DQ9Y5K8 247 aa17.08■□□□□ 0.33
CDH1-209ENST00000566510 ADCY9O60503 1353 aa17.08■□□□□ 0.33
CDH1-209ENST00000566510 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 UQCRHP07919 91 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 UBE2HP62256 183 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
CDH1-209ENST00000566510 PROSER3Q2NL68 480 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 C1orf141Q5JVX7 400 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 CYP46A1Q9Y6A2 500 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDH1-209ENST00000566510 LTN1O94822 1766 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 ANKARQ7Z5J8 1434 aa17.08■□□□□ 0.32
CDH1-209ENST00000566510 HOXB7P09629 217 aa17.07■□□□□ 0.32
CDH1-209ENST00000566510 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
CDH1-209ENST00000566510 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
CDH1-209ENST00000566510 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
CDH1-209ENST00000566510 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
CDH1-209ENST00000566510 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
CDH1-209ENST00000566510 AKAP4Q5JQC9 854 aa17.07■□□□□ 0.32
CDH1-209ENST00000566510 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
CDH1-209ENST00000566510 FAM184AQ8NB25 1140 aa17.06■□□□□ 0.32
CDH1-209ENST00000566510 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
CDH1-209ENST00000566510 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
CDH1-209ENST00000566510 SIL1Q9H173 461 aa17.06■□□□□ 0.32
CDH1-209ENST00000566510 SLIT1O75093 1534 aa17.06■□□□□ 0.32
CDH1-209ENST00000566510 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
CDH1-209ENST00000566510 TMEM87AQ8NBN3 555 aa17.05■□□□□ 0.32
CDH1-209ENST00000566510 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
CDH1-209ENST00000566510 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
CDH1-209ENST00000566510 CHMP3Q9Y3E7 222 aa17.05■□□□□ 0.32
CDH1-209ENST00000566510 ADCY5O95622 1261 aa17.05■□□□□ 0.32
CDH1-209ENST00000566510 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 TERF1P54274 439 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 VPS53Q5VIR6 699 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 LETM1O95202 739 aaPredicted RBP17.04■□□□□ 0.32
CDH1-209ENST00000566510 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
CDH1-209ENST00000566510 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDH1-209ENST00000566510 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
CDH1-209ENST00000566510 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
CDH1-209ENST00000566510 ME3Q16798 604 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
CDH1-209ENST00000566510 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
CDH1-209ENST00000566510 UVSSAQ2YD98 709 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 FERMT3Q86UX7 667 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 CCDC171Q6TFL3 1326 aa17.03■□□□□ 0.32
CDH1-209ENST00000566510 ALDH1L1O75891 902 aa17.02■□□□□ 0.32
CDH1-209ENST00000566510 MTX1Q13505 466 aa17.02■□□□□ 0.32
CDH1-209ENST00000566510 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
CDH1-209ENST00000566510 ARID3AQ99856 593 aa17.02■□□□□ 0.32
CDH1-209ENST00000566510 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
CDH1-209ENST00000566510 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
CDH1-209ENST00000566510 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.32
CDH1-209ENST00000566510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
CDH1-209ENST00000566510 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.31
CDH1-209ENST00000566510 LARP1BQ659C4 914 aaKnown RBP17.02■□□□□ 0.31
CDH1-209ENST00000566510 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.31
CDH1-209ENST00000566510 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.31
CDH1-209ENST00000566510 SH2B1Q9NRF2 756 aaPredicted RBP17.02■□□□□ 0.31
CDH1-209ENST00000566510 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
CDH1-209ENST00000566510 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 FSD1Q9BTV5 496 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms