RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 TTLL7Q6ZT98 887 aa25.14■■□□□ 1.62
CCDC113-204ENST00000566498 ARHGAP27Q6ZUM4 889 aa25.14■■□□□ 1.62
CCDC113-204ENST00000566498 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
CCDC113-204ENST00000566498 CNBD1Q8NA66 436 aa25.14■■□□□ 1.62
CCDC113-204ENST00000566498 KIAA1551Q9HCM1 1747 aa25.14■■□□□ 1.61
CCDC113-204ENST00000566498 GNAI1P63096 354 aa25.13■■□□□ 1.61
CCDC113-204ENST00000566498 PRR5LQ6MZQ0 368 aa25.13■■□□□ 1.61
CCDC113-204ENST00000566498 NBPF5PQ86XG9 351 aaPredicted RBP25.13■■□□□ 1.61
CCDC113-204ENST00000566498 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
CCDC113-204ENST00000566498 FAM177BA6PVY3 158 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 ERVV-1B6SEH8 477 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 RGL2O15211 777 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 PDE6BP35913 854 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 ST5P78524 1137 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 ZNF784Q8NCA9 323 aaPredicted RBP25.12■■□□□ 1.61
CCDC113-204ENST00000566498 BRIP1Q9BX63 1249 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 NRXN2Q9P2S2 1712 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 MAP3K15Q6ZN16 1313 aa25.12■■□□□ 1.61
CCDC113-204ENST00000566498 ANXA1P04083 346 aa25.11■■□□□ 1.61
CCDC113-204ENST00000566498 TPTE2Q6XPS3 522 aa25.11■■□□□ 1.61
CCDC113-204ENST00000566498 FAM9BQ8IZU0 186 aa25.11■■□□□ 1.61
CCDC113-204ENST00000566498 ZBTB3Q9H5J0 574 aa25.11■■□□□ 1.61
CCDC113-204ENST00000566498 IFT57Q9NWB7 429 aa25.11■■□□□ 1.61
CCDC113-204ENST00000566498 BCORQ6W2J9 1755 aa25.1■■□□□ 1.61
CCDC113-204ENST00000566498 ZNF853P0CG23 659 aa25.1■■□□□ 1.61
CCDC113-204ENST00000566498 PDIA6Q15084 440 aa25.1■■□□□ 1.61
CCDC113-204ENST00000566498 GTF2E1P29083 439 aaPredicted RBP25.09■■□□□ 1.61
CCDC113-204ENST00000566498 PROSER3Q2NL68 480 aa25.09■■□□□ 1.61
CCDC113-204ENST00000566498 DUSP27Q5VZP5 1158 aa25.09■■□□□ 1.61
CCDC113-204ENST00000566498 ZNF622Q969S3 477 aaKnown RBP eCLIP25.09■■□□□ 1.61
CCDC113-204ENST00000566498 AIMP1Q12904 312 aaKnown RBP25.08■■□□□ 1.61
CCDC113-204ENST00000566498 HDGFL1Q5TGJ6 251 aa25.08■■□□□ 1.61
CCDC113-204ENST00000566498 PDZRN3Q9UPQ7 1066 aa25.08■■□□□ 1.61
CCDC113-204ENST00000566498 SALL2Q9Y467 1007 aaPredicted RBP25.08■■□□□ 1.61
CCDC113-204ENST00000566498 ELL2O00472 640 aaPredicted RBP25.07■■□□□ 1.6
CCDC113-204ENST00000566498 COPS6Q7L5N1 327 aa25.07■■□□□ 1.6
CCDC113-204ENST00000566498 TTLL6Q8N841 843 aa25.07■■□□□ 1.6
CCDC113-204ENST00000566498 DDX21Q9NR30 783 aaKnown RBP eCLIP25.07■■□□□ 1.6
CCDC113-204ENST00000566498 HOXB7P09629 217 aa25.06■■□□□ 1.6
CCDC113-204ENST00000566498 GPTP24298 496 aa25.06■■□□□ 1.6
CCDC113-204ENST00000566498 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
CCDC113-204ENST00000566498 BRCA1P38398 1863 aaKnown RBP25.05■■□□□ 1.6
CCDC113-204ENST00000566498 CCDC27Q2M243 656 aa25.05■■□□□ 1.6
CCDC113-204ENST00000566498 CHPF2Q9P2E5 772 aa25.05■■□□□ 1.6
CCDC113-204ENST00000566498 LRP10Q7Z4F1 713 aa25.04■■□□□ 1.6
CCDC113-204ENST00000566498 XAGE3Q8WTP9 111 aa25.04■■□□□ 1.6
CCDC113-204ENST00000566498 NUP98P52948 1817 aa25.03■■□□□ 1.6
CCDC113-204ENST00000566498 GIGYF2Q6Y7W6 1299 aaKnown RBP25.03■■□□□ 1.6
CCDC113-204ENST00000566498 NYXQ9GZU5 481 aa25.03■■□□□ 1.6
CCDC113-204ENST00000566498 DBF4Q9UBU7 674 aaPredicted RBP25.03■■□□□ 1.6
CCDC113-204ENST00000566498 C8orf58Q8NAV2 365 aa25.01■■□□□ 1.59
CCDC113-204ENST00000566498 ANKRD31Q8N7Z5 1873 aa25■■□□□ 1.59
CCDC113-204ENST00000566498 ZNF34Q8IZ26 560 aa25■■□□□ 1.59
CCDC113-204ENST00000566498 TSR2Q969E8 191 aaKnown RBP25■■□□□ 1.59
CCDC113-204ENST00000566498 ARFGEF1Q9Y6D6 1849 aa25■■□□□ 1.59
CCDC113-204ENST00000566498 SRGNP10124 158 aa24.99■■□□□ 1.59
CCDC113-204ENST00000566498 NCBP3Q53F19 620 aaKnown RBP24.99■■□□□ 1.59
CCDC113-204ENST00000566498 SUSD4Q5VX71 490 aa24.99■■□□□ 1.59
CCDC113-204ENST00000566498 NUTM1Q86Y26 1132 aa24.99■■□□□ 1.59
CCDC113-204ENST00000566498 CNKSR1Q969H4 720 aa24.99■■□□□ 1.59
CCDC113-204ENST00000566498 MASTLQ96GX5 879 aa24.99■■□□□ 1.59
CCDC113-204ENST00000566498 HYPKQ9NX55 129 aa24.99■■□□□ 1.59
CCDC113-204ENST00000566498 ZNF219Q9P2Y4 722 aaPredicted RBP24.99■■□□□ 1.59
CCDC113-204ENST00000566498 STYK1Q6J9G0 422 aa24.98■■□□□ 1.59
CCDC113-204ENST00000566498 PPP1R42Q7Z4L9 355 aa24.98■■□□□ 1.59
CCDC113-204ENST00000566498 CHMP4AQ9BY43 222 aa24.98■■□□□ 1.59
CCDC113-204ENST00000566498 ATP10DQ9P241 1426 aa24.97■■□□□ 1.59
CCDC113-204ENST00000566498 ERFEQ4G0M1 354 aa24.97■■□□□ 1.59
CCDC113-204ENST00000566498 HSP90AB3PQ58FF7 597 aa24.97■■□□□ 1.59
CCDC113-204ENST00000566498 ANKRD13DQ6ZTN6 518 aa24.97■■□□□ 1.59
CCDC113-204ENST00000566498 ZNF526Q8TF50 670 aaPredicted RBP24.97■■□□□ 1.59
CCDC113-204ENST00000566498 UBN2Q6ZU65 1347 aa24.96■■□□□ 1.59
CCDC113-204ENST00000566498 PARP10Q53GL7 1025 aa24.96■■□□□ 1.59
CCDC113-204ENST00000566498 IL16Q14005 1332 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 C21orf2O43822 256 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 NPR1P16066 1061 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 TCIRG1Q13488 830 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 C9orf131Q5VYM1 1079 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 WDR63Q8IWG1 891 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.58
CCDC113-204ENST00000566498 CCDC30Q5VVM6 783 aa24.94■■□□□ 1.58
CCDC113-204ENST00000566498 TSPYL6Q8N831 410 aa24.94■■□□□ 1.58
CCDC113-204ENST00000566498 PLBD2Q8NHP8 589 aa24.94■■□□□ 1.58
CCDC113-204ENST00000566498 UTP14AQ9BVJ6 771 aaKnown RBP24.94■■□□□ 1.58
CCDC113-204ENST00000566498 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
CCDC113-204ENST00000566498 GPBP1L1Q9HC44 474 aaPredicted RBP24.93■■□□□ 1.58
CCDC113-204ENST00000566498 PRPF40BQ6NWY9 871 aaKnown RBP24.92■■□□□ 1.58
CCDC113-204ENST00000566498 RNF181Q9P0P0 153 aa24.92■■□□□ 1.58
CCDC113-204ENST00000566498 NTSR2O95665 410 aa24.91■■□□□ 1.58
CCDC113-204ENST00000566498 ALDH1B1P30837 517 aa24.91■■□□□ 1.58
CCDC113-204ENST00000566498 RIC3Q7Z5B4 369 aa24.91■■□□□ 1.58
CCDC113-204ENST00000566498 PHAXQ9H814 394 aaKnown RBP24.91■■□□□ 1.58
CCDC113-204ENST00000566498 COL11A2P13942 1736 aaPredicted RBP24.9■■□□□ 1.58
CCDC113-204ENST00000566498 RASSF7Q02833 373 aa24.9■■□□□ 1.58
CCDC113-204ENST00000566498 TWISTNBQ3B726 338 aaPredicted RBP24.9■■□□□ 1.58
CCDC113-204ENST00000566498 NLRP10Q86W26 655 aa24.9■■□□□ 1.58
CCDC113-204ENST00000566498 RPGRQ92834 1020 aaKnown RBP24.89■■□□□ 1.58
CCDC113-204ENST00000566498 ZNF428Q96B54 188 aa24.89■■□□□ 1.58
CCDC113-204ENST00000566498 TRMT112Q9UI30 125 aaKnown RBP24.89■■□□□ 1.58
CCDC113-204ENST00000566498 ADCY9O60503 1353 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms