RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 CABP4P57796 275 aa21.17■□□□□ 0.98
RAB40C-210ENST00000566290 SMC5Q8IY18 1101 aa21.17■□□□□ 0.98
RAB40C-210ENST00000566290 SLC4A9Q96Q91 983 aa21.17■□□□□ 0.98
RAB40C-210ENST00000566290 TAF1LQ8IZX4 1826 aa21.16■□□□□ 0.98
RAB40C-210ENST00000566290 TEFQ10587 303 aa21.16■□□□□ 0.98
RAB40C-210ENST00000566290 NFATC2IPQ8NCF5 419 aa21.16■□□□□ 0.98
RAB40C-210ENST00000566290 STK31Q9BXU1 1019 aa21.16■□□□□ 0.98
RAB40C-210ENST00000566290 LOC102724428A0A0B4J2F2 783 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 SIK1P57059 783 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 ITPK1Q13572 414 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 AMIGO3Q86WK7 504 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 TNS4Q8IZW8 715 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 BACH2Q9BYV9 841 aa21.15■□□□□ 0.98
RAB40C-210ENST00000566290 IBTKQ9P2D0 1353 aaPredicted RBP21.14■□□□□ 0.98
RAB40C-210ENST00000566290 EIF4A1P60842 406 aaKnown RBP21.14■□□□□ 0.97
RAB40C-210ENST00000566290 SMIM5Q71RC9 77 aa21.14■□□□□ 0.97
RAB40C-210ENST00000566290 JMYQ8N9B5 988 aa21.14■□□□□ 0.97
RAB40C-210ENST00000566290 LINC00116Q8NCU8 138 aa21.14■□□□□ 0.97
RAB40C-210ENST00000566290 KLRG1Q96E93 195 aa21.14■□□□□ 0.97
RAB40C-210ENST00000566290 NMRK2Q9NPI5 230 aa21.13■□□□□ 0.97
RAB40C-210ENST00000566290 CCT4P50991 539 aaKnown RBP21.12■□□□□ 0.97
RAB40C-210ENST00000566290 C4BP0C0L5 1744 aa21.12■□□□□ 0.97
RAB40C-210ENST00000566290 WDR90Q96KV7 1748 aa21.12■□□□□ 0.97
RAB40C-210ENST00000566290 SLC4A2P04920 1241 aa21.11■□□□□ 0.97
RAB40C-210ENST00000566290 PDE4AP27815 886 aa21.11■□□□□ 0.97
RAB40C-210ENST00000566290 ATP6V1AP38606 617 aa21.11■□□□□ 0.97
RAB40C-210ENST00000566290 FLAD1Q8NFF5 587 aa21.11■□□□□ 0.97
RAB40C-210ENST00000566290 SLC52A2Q9HAB3 445 aa21.11■□□□□ 0.97
RAB40C-210ENST00000566290 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
RAB40C-210ENST00000566290 MIS18AQ9NYP9 233 aa21.1■□□□□ 0.97
RAB40C-210ENST00000566290 GCC1Q96CN9 775 aa21.09■□□□□ 0.97
RAB40C-210ENST00000566290 BTBD11A6QL63 1104 aa21.08■□□□□ 0.97
RAB40C-210ENST00000566290 PTCD1O75127 700 aaKnown RBP21.08■□□□□ 0.97
RAB40C-210ENST00000566290 SLC39A6Q13433 755 aa21.08■□□□□ 0.97
RAB40C-210ENST00000566290 FAM161AQ3B820 660 aa21.08■□□□□ 0.97
RAB40C-210ENST00000566290 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.96
RAB40C-210ENST00000566290 FLIIQ13045 1269 aa21.07■□□□□ 0.96
RAB40C-210ENST00000566290 PCNTO95613 3336 aa21.06■□□□□ 0.96
RAB40C-210ENST00000566290 UBR2Q8IWV8 1755 aa21.06■□□□□ 0.96
RAB40C-210ENST00000566290 HDGFL1Q5TGJ6 251 aa21.06■□□□□ 0.96
RAB40C-210ENST00000566290 RPAP2Q8IXW5 612 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-210ENST00000566290 RBM46Q8TBY0 533 aaKnown RBP21.06■□□□□ 0.96
RAB40C-210ENST00000566290 CICQ96RK0 1608 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-210ENST00000566290 UBR3Q6ZT12 1888 aa21.05■□□□□ 0.96
RAB40C-210ENST00000566290 AK7Q96M32 723 aa21.05■□□□□ 0.96
RAB40C-210ENST00000566290 PDZRN3Q9UPQ7 1066 aa21.05■□□□□ 0.96
RAB40C-210ENST00000566290 PHF14O94880 888 aa21.04■□□□□ 0.96
RAB40C-210ENST00000566290 ZNF831Q5JPB2 1677 aa21.04■□□□□ 0.96
RAB40C-210ENST00000566290 NUCB1Q02818 461 aa21.03■□□□□ 0.96
RAB40C-210ENST00000566290 COL5A3P25940 1745 aaPredicted RBP21.03■□□□□ 0.96
RAB40C-210ENST00000566290 TJP1Q07157 1748 aa21.03■□□□□ 0.96
RAB40C-210ENST00000566290 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
RAB40C-210ENST00000566290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
RAB40C-210ENST00000566290 ANKRD44Q8N8A2 993 aa21.02■□□□□ 0.96
RAB40C-210ENST00000566290 DBF4Q9UBU7 674 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-210ENST00000566290 GNPATO15228 680 aa21.01■□□□□ 0.95
RAB40C-210ENST00000566290 C8orf34Q49A92 452 aa21.01■□□□□ 0.95
RAB40C-210ENST00000566290 G2E3Q7L622 706 aa21.01■□□□□ 0.95
RAB40C-210ENST00000566290 GNAI3P08754 354 aa21■□□□□ 0.95
RAB40C-210ENST00000566290 ARHGAP27Q6ZUM4 889 aa21■□□□□ 0.95
RAB40C-210ENST00000566290 BCS1LQ9Y276 419 aa21■□□□□ 0.95
RAB40C-210ENST00000566290 MYH14Q7Z406 1995 aaKnown RBP20.99■□□□□ 0.95
RAB40C-210ENST00000566290 ZNF790Q6PG37 636 aa20.99■□□□□ 0.95
RAB40C-210ENST00000566290 DNAJC10Q8IXB1 793 aa20.99■□□□□ 0.95
RAB40C-210ENST00000566290 C16orf71Q8IYS4 520 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-210ENST00000566290 KCNQ3O43525 872 aa20.98■□□□□ 0.95
RAB40C-210ENST00000566290 FSTL1Q12841 308 aa20.98■□□□□ 0.95
RAB40C-210ENST00000566290 FKBP5Q13451 457 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-210ENST00000566290 SIRT2Q8IXJ6 389 aa20.98■□□□□ 0.95
RAB40C-210ENST00000566290 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
RAB40C-210ENST00000566290 A0A0G2JLW4 131 aa20.97■□□□□ 0.95
RAB40C-210ENST00000566290 SSFA2P28290 1259 aa20.97■□□□□ 0.95
RAB40C-210ENST00000566290 RGS3P49796 1198 aa20.97■□□□□ 0.95
RAB40C-210ENST00000566290 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
RAB40C-210ENST00000566290 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
RAB40C-210ENST00000566290 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
RAB40C-210ENST00000566290 CRKLP46109 303 aaKnown RBP20.96■□□□□ 0.95
RAB40C-210ENST00000566290 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
RAB40C-210ENST00000566290 CEP85Q6P2H3 762 aa20.96■□□□□ 0.95
RAB40C-210ENST00000566290 HYPKQ9NX55 129 aa20.96■□□□□ 0.95
RAB40C-210ENST00000566290 HMMRO75330 724 aa20.95■□□□□ 0.94
RAB40C-210ENST00000566290 ANP32AP39687 249 aaKnown RBP20.95■□□□□ 0.94
RAB40C-210ENST00000566290 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
RAB40C-210ENST00000566290 INTS5Q6P9B9 1019 aaKnown RBP20.95■□□□□ 0.94
RAB40C-210ENST00000566290 CHD1LQ86WJ1 897 aa20.95■□□□□ 0.94
RAB40C-210ENST00000566290 ZNF496Q96IT1 587 aaPredicted RBP20.95■□□□□ 0.94
RAB40C-210ENST00000566290 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
RAB40C-210ENST00000566290 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
RAB40C-210ENST00000566290 SKAP1Q86WV1 359 aa20.94■□□□□ 0.94
RAB40C-210ENST00000566290 MEIS3Q99687 375 aa20.94■□□□□ 0.94
RAB40C-210ENST00000566290 DDX21Q9NR30 783 aaKnown RBP eCLIP20.94■□□□□ 0.94
RAB40C-210ENST00000566290 MMP10P09238 476 aa20.93■□□□□ 0.94
RAB40C-210ENST00000566290 HSPA1AP0DMV8 641 aaKnown RBP20.93■□□□□ 0.94
RAB40C-210ENST00000566290 HSPA1BP0DMV9 641 aaKnown RBP20.93■□□□□ 0.94
RAB40C-210ENST00000566290 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
RAB40C-210ENST00000566290 TGFB2P61812 414 aa20.93■□□□□ 0.94
RAB40C-210ENST00000566290 ARHGEF1Q92888 912 aaKnown RBP20.93■□□□□ 0.94
RAB40C-210ENST00000566290 RRAGCQ9HB90 399 aa20.93■□□□□ 0.94
RAB40C-210ENST00000566290 CHPF2Q9P2E5 772 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms