RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
CNOT1-209ENST00000566240 DGKZQ13574 1117 aa8.12□□□□□ -1.11
CNOT1-209ENST00000566240 DSC3Q14574 896 aa8.12□□□□□ -1.11
CNOT1-209ENST00000566240 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
CNOT1-209ENST00000566240 FAM129BQ96TA1 746 aa8.12□□□□□ -1.11
CNOT1-209ENST00000566240 NIFKQ9BYG3 293 aaKnown RBP8.12□□□□□ -1.11
CNOT1-209ENST00000566240 ZNF395Q9H8N7 513 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-209ENST00000566240 J3QL48 77 aa8.11□□□□□ -1.11
CNOT1-209ENST00000566240 IGHA2P01877 340 aa8.11□□□□□ -1.11
CNOT1-209ENST00000566240 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-209ENST00000566240 TMEM214Q6NUQ4 689 aaKnown RBP8.11□□□□□ -1.11
CNOT1-209ENST00000566240 ETFBKMTQ8IXQ9 262 aa8.11□□□□□ -1.11
CNOT1-209ENST00000566240 PHACTR1Q9C0D0 580 aa8.11□□□□□ -1.11
CNOT1-209ENST00000566240 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
CNOT1-209ENST00000566240 SNRPBP14678 240 aaKnown RBP8.1□□□□□ -1.11
CNOT1-209ENST00000566240 TIMP2P16035 220 aa8.1□□□□□ -1.11
CNOT1-209ENST00000566240 EHHADHQ08426 723 aa8.1□□□□□ -1.11
CNOT1-209ENST00000566240 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
CNOT1-209ENST00000566240 IFT43Q96FT9 208 aa8.1□□□□□ -1.11
CNOT1-209ENST00000566240 KLK14Q9P0G3 267 aa8.1□□□□□ -1.11
CNOT1-209ENST00000566240 MZF1P28698 734 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-209ENST00000566240 MAPK8P45983 427 aa8.09□□□□□ -1.11
CNOT1-209ENST00000566240 FGD1P98174 961 aa8.09□□□□□ -1.11
CNOT1-209ENST00000566240 DNM1Q05193 864 aaKnown RBP8.09□□□□□ -1.11
CNOT1-209ENST00000566240 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
CNOT1-209ENST00000566240 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
CNOT1-209ENST00000566240 ALKBH8Q96BT7 664 aaKnown RBP8.09□□□□□ -1.11
CNOT1-209ENST00000566240 POLIQ9UNA4 740 aa8.09□□□□□ -1.11
CNOT1-209ENST00000566240 GPR182O15218 404 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 RECKO95980 971 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 LDHBP07195 334 aaKnown RBP8.08□□□□□ -1.12
CNOT1-209ENST00000566240 ZAP70P43403 619 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 USP5P45974 858 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 GJD3Q8N144 294 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 EDEM1Q92611 657 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 GRIP2Q9C0E4 1043 aa8.08□□□□□ -1.12
CNOT1-209ENST00000566240 GPC1P35052 558 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 TXLNAP40222 546 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 SLC27A3Q5K4L6 730 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 HPS1Q92902 700 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 NIF3L1Q9GZT8 377 aa8.07□□□□□ -1.12
CNOT1-209ENST00000566240 WIPF1O43516 503 aa8.06□□□□□ -1.12
CNOT1-209ENST00000566240 PRPF40AO75400 957 aaKnown RBP8.06□□□□□ -1.12
CNOT1-209ENST00000566240 PDGFAP04085 211 aa8.06□□□□□ -1.12
CNOT1-209ENST00000566240 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-209ENST00000566240 MRPL58Q14197 206 aaKnown RBP8.06□□□□□ -1.12
CNOT1-209ENST00000566240 TREML1Q86YW5 311 aa8.06□□□□□ -1.12
CNOT1-209ENST00000566240 MEIOBQ8N635 442 aa8.06□□□□□ -1.12
CNOT1-209ENST00000566240 TRIM47Q96LD4 638 aa8.06□□□□□ -1.12
CNOT1-209ENST00000566240 PARP2Q9UGN5 583 aa8.06□□□□□ -1.12
CNOT1-209ENST00000566240 RNF144AP50876 292 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-209ENST00000566240 ATP2B2Q01814 1243 aa8.05□□□□□ -1.12
CNOT1-209ENST00000566240 DUSP9Q99956 384 aaKnown RBP8.05□□□□□ -1.12
CNOT1-209ENST00000566240 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
CNOT1-209ENST00000566240 USP35Q9P2H5 1018 aa8.05□□□□□ -1.12
CNOT1-209ENST00000566240 WWC3Q9ULE0 1092 aa8.05□□□□□ -1.12
CNOT1-209ENST00000566240 LOC105371045A0A1W2PR82 267 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 PCSK2P16519 638 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 C4orf17Q53FE4 359 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 GPR152Q8TDT2 470 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 AIDAQ96BJ3 306 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 INSM2Q96T92 566 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-209ENST00000566240 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 BCS1LQ9Y276 419 aa8.04□□□□□ -1.12
CNOT1-209ENST00000566240 TERTO14746 1132 aaKnown RBP8.03□□□□□ -1.12
CNOT1-209ENST00000566240 ENOX2Q16206 610 aaKnown RBP8.03□□□□□ -1.12
CNOT1-209ENST00000566240 RHPN1Q8TCX5 695 aa8.03□□□□□ -1.12
CNOT1-209ENST00000566240 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
CNOT1-209ENST00000566240 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
CNOT1-209ENST00000566240 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
CNOT1-209ENST00000566240 SENP2Q9HC62 589 aa8.03□□□□□ -1.12
CNOT1-209ENST00000566240 PNMA6FA0A0J9YX94 578 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 SPINT1O43278 529 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 MICAL2O94851 1124 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 ITGAEP38570 1179 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 DAB2P98082 770 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 HIF1AQ16665 826 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 NBPF1Q3BBV0 1214 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 ALG1LQ6GMV1 187 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 TMC4Q7Z404 712 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 SETDB2Q96T68 719 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 RNF19AQ9NV58 838 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 FAM13BQ9NYF5 915 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 ZDHHC3Q9NYG2 299 aa8.02□□□□□ -1.13
CNOT1-209ENST00000566240 SPATA31C2B4DYI2 1134 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 SCAMP3O14828 347 aaKnown RBP8.01□□□□□ -1.13
CNOT1-209ENST00000566240 SORBS3O60504 671 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
CNOT1-209ENST00000566240 PHKA2P46019 1235 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 INSM1Q01101 510 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-209ENST00000566240 PSMD2Q13200 908 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 C8orf34Q49A92 452 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 LDLRAD1Q5T700 205 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 TTC16Q8NEE8 873 aa8.01□□□□□ -1.13
CNOT1-209ENST00000566240 GGNBP2Q9H3C7 697 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms