RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 RABGAP1Q9Y3P9 1069 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 CLGNO14967 610 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 TDRD12Q587J7 1177 aaKnown RBP12.26□□□□□ -0.45
SNX29-205ENST00000566228 MKNK2Q9HBH9 465 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 ZBTB17Q13105 803 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 TRPC3Q13507 836 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 CSRNP2Q9H175 543 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 RMND1Q9NWS8 449 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 BMP15O95972 392 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 CUL4BQ13620 913 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 MUM1L1Q5H9M0 696 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
SNX29-205ENST00000566228 VCX3AQ9NNX9 186 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 IFT74Q96LB3 600 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 CTAGE1Q96RT6 745 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 RAI14Q9P0K7 980 aa12.25□□□□□ -0.45
SNX29-205ENST00000566228 CEBPZQ03701 1054 aaKnown RBP12.24□□□□□ -0.45
SNX29-205ENST00000566228 AIDAQ96BJ3 306 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 STARD3NLO95772 234 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 IRX4P78413 519 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 CACNA2D3Q8IZS8 1091 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 WDR78Q5VTH9 848 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX29-205ENST00000566228 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 PAIP2Q9BPZ3 127 aaKnown RBP12.24□□□□□ -0.45
SNX29-205ENST00000566228 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 SH2B1Q9NRF2 756 aaPredicted RBP12.24□□□□□ -0.45
SNX29-205ENST00000566228 ZNF354CQ86Y25 554 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 ARFGAP2Q8N6H7 521 aa12.24□□□□□ -0.45
SNX29-205ENST00000566228 DNAJC8O75937 253 aaPredicted RBP12.23□□□□□ -0.45
SNX29-205ENST00000566228 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 MAATS1Q7Z4T9 603 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 VPS52Q8N1B4 723 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 PAXBP1Q9Y5B6 917 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 STMN2Q93045 179 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 RSRC1Q96IZ7 334 aaKnown RBP12.23□□□□□ -0.45
SNX29-205ENST00000566228 CIB2O75838 187 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 ARHGAP24Q8N264 748 aa12.23□□□□□ -0.45
SNX29-205ENST00000566228 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 MYO1BO43795 1136 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 MCM5P33992 734 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 TAF12Q16514 161 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 PSPC1Q8WXF1 523 aaKnown RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNX29-205ENST00000566228 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 USP47Q96K76 1375 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 CRCPO75575 148 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 POLR3DP05423 398 aaPredicted RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 SLC8A3P57103 927 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 SEPT8Q92599 483 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 BIRC2Q13490 618 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 PHLDB2Q86SQ0 1253 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 MTIF2P46199 727 aaKnown RBP12.22□□□□□ -0.45
SNX29-205ENST00000566228 CABP4P57796 275 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 BICDL1Q6ZP65 573 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 TMOD4Q9NZQ9 345 aa12.22□□□□□ -0.45
SNX29-205ENST00000566228 CROCCP2Q86T23 111 aa12.21□□□□□ -0.45
SNX29-205ENST00000566228 PFDN4Q9NQP4 134 aa12.21□□□□□ -0.45
SNX29-205ENST00000566228 CCDC171Q6TFL3 1326 aa12.21□□□□□ -0.45
SNX29-205ENST00000566228 ZNF853P0CG23 659 aa12.21□□□□□ -0.45
SNX29-205ENST00000566228 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
SNX29-205ENST00000566228 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
SNX29-205ENST00000566228 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.45
SNX29-205ENST00000566228 LACTBP83111 547 aaPredicted RBP12.21□□□□□ -0.46
SNX29-205ENST00000566228 CCDC63Q8NA47 563 aa12.21□□□□□ -0.46
SNX29-205ENST00000566228 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.46
SNX29-205ENST00000566228 RPGRIP1LQ68CZ1 1315 aa12.21□□□□□ -0.46
SNX29-205ENST00000566228 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.46
SNX29-205ENST00000566228 CYLC1P35663 651 aaPredicted RBP12.2□□□□□ -0.46
SNX29-205ENST00000566228 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 CCDC96Q2M329 555 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 PRR16Q569H4 304 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
SNX29-205ENST00000566228 FAM169AQ9Y6X4 670 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 CLUL1Q15846 466 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 MAP3K21Q5TCX8 1036 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
SNX29-205ENST00000566228 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNX29-205ENST00000566228 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 GBP6Q6ZN66 633 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 MAP3K12Q12852 859 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 HAUS7Q99871 368 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
SNX29-205ENST00000566228 KRT13P13646 458 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms