RNA–Protein interactions for RNA: ENST00000565954.1

CCDC187-202, Transcript of coiled-coil domain containing 187, humanhuman

TSL 2

Gene CCDC187, Length 1,802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-202ENST00000565954 PCDHB15Q9Y5E8 787 aa24.18■■□□□ 1.46
CCDC187-202ENST00000565954 ARFGEF2Q9Y6D5 1785 aa24.18■■□□□ 1.46
CCDC187-202ENST00000565954 IL6STP40189 918 aaPredicted RBP24.17■■□□□ 1.46
CCDC187-202ENST00000565954 ATP10DQ9P241 1426 aa24.17■■□□□ 1.46
CCDC187-202ENST00000565954 CWF19L2Q2TBE0 894 aaKnown RBP24.17■■□□□ 1.46
CCDC187-202ENST00000565954 MYD88Q99836 296 aa24.17■■□□□ 1.46
CCDC187-202ENST00000565954 METTL22Q9BUU2 404 aaPredicted RBP24.17■■□□□ 1.46
CCDC187-202ENST00000565954 RREB1Q92766 1687 aa24.16■■□□□ 1.46
CCDC187-202ENST00000565954 NPM2Q86SE8 214 aaKnown RBP24.16■■□□□ 1.46
CCDC187-202ENST00000565954 APBA3O96018 575 aa24.15■■□□□ 1.46
CCDC187-202ENST00000565954 NEXNQ0ZGT2 675 aa24.15■■□□□ 1.46
CCDC187-202ENST00000565954 KIF6Q6ZMV9 814 aa24.15■■□□□ 1.46
CCDC187-202ENST00000565954 LRRC4BQ9NT99 713 aa24.15■■□□□ 1.46
CCDC187-202ENST00000565954 NUP188Q5SRE5 1749 aa24.15■■□□□ 1.46
CCDC187-202ENST00000565954 TAF1LQ8IZX4 1826 aa24.15■■□□□ 1.46
CCDC187-202ENST00000565954 EIF5P55010 431 aaKnown RBP24.14■■□□□ 1.46
CCDC187-202ENST00000565954 LINS1Q8NG48 757 aa24.14■■□□□ 1.46
CCDC187-202ENST00000565954 IGKV5-2P06315 115 aa24.14■■□□□ 1.45
CCDC187-202ENST00000565954 CNTNAP4Q9C0A0 1308 aa24.13■■□□□ 1.45
CCDC187-202ENST00000565954 USP44Q9H0E7 712 aa24.13■■□□□ 1.45
CCDC187-202ENST00000565954 TBC1D2BQ9UPU7 963 aa24.13■■□□□ 1.45
CCDC187-202ENST00000565954 ATP5J2-PTCD1G3V325 749 aa24.12■■□□□ 1.45
CCDC187-202ENST00000565954 DZIP3Q86Y13 1208 aaKnown RBP24.12■■□□□ 1.45
CCDC187-202ENST00000565954 ALDH1L1O75891 902 aa24.12■■□□□ 1.45
CCDC187-202ENST00000565954 MAP3K15Q6ZN16 1313 aa24.11■■□□□ 1.45
CCDC187-202ENST00000565954 SMIM5Q71RC9 77 aa24.11■■□□□ 1.45
CCDC187-202ENST00000565954 NEURL1BA8MQ27 555 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 IGHDP01880 384 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 SLC27A3Q5K4L6 730 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 RC3H1Q5TC82 1133 aaKnown RBP24.1■■□□□ 1.45
CCDC187-202ENST00000565954 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
CCDC187-202ENST00000565954 GNPATO15228 680 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 GNAI3P08754 354 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 TXNRD1Q16881 649 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 PROM2Q8N271 834 aa24.1■■□□□ 1.45
CCDC187-202ENST00000565954 AFDNP55196 1824 aaKnown RBP24.09■■□□□ 1.45
CCDC187-202ENST00000565954 C4BP0C0L5 1744 aa24.09■■□□□ 1.45
CCDC187-202ENST00000565954 NBPF7P0C2Y1 421 aaPredicted RBP24.09■■□□□ 1.45
CCDC187-202ENST00000565954 HLFQ16534 295 aa24.09■■□□□ 1.45
CCDC187-202ENST00000565954 C9orf78Q9NZ63 289 aaPredicted RBP24.09■■□□□ 1.45
CCDC187-202ENST00000565954 COL15A1P39059 1388 aa24.09■■□□□ 1.45
CCDC187-202ENST00000565954 PLSCR1O15162 318 aa24.08■■□□□ 1.45
CCDC187-202ENST00000565954 UBTFL1P0CB47 393 aaPredicted RBP24.08■■□□□ 1.45
CCDC187-202ENST00000565954 RPS6KA4O75676 772 aa24.07■■□□□ 1.44
CCDC187-202ENST00000565954 GNAI2P04899 355 aa24.07■■□□□ 1.44
CCDC187-202ENST00000565954 GCKRQ14397 625 aa24.07■■□□□ 1.44
CCDC187-202ENST00000565954 GIGYF2Q6Y7W6 1299 aaKnown RBP24.06■■□□□ 1.44
CCDC187-202ENST00000565954 GRM8O00222 908 aa24.05■■□□□ 1.44
CCDC187-202ENST00000565954 TCIRG1Q13488 830 aa24.05■■□□□ 1.44
CCDC187-202ENST00000565954 AMIGO3Q86WK7 504 aa24.05■■□□□ 1.44
CCDC187-202ENST00000565954 AK7Q96M32 723 aa24.05■■□□□ 1.44
CCDC187-202ENST00000565954 LRRFIP2Q9Y608 721 aaKnown RBP24.05■■□□□ 1.44
CCDC187-202ENST00000565954 KDM2BQ8NHM5 1336 aa24.05■■□□□ 1.44
CCDC187-202ENST00000565954 RWDD1Q9H446 243 aaPredicted RBP24.05■■□□□ 1.44
CCDC187-202ENST00000565954 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
CCDC187-202ENST00000565954 NUP98P52948 1817 aa24.04■■□□□ 1.44
CCDC187-202ENST00000565954 ERVV-1B6SEH8 477 aa24.04■■□□□ 1.44
CCDC187-202ENST00000565954 SIRT2Q8IXJ6 389 aa24.04■■□□□ 1.44
CCDC187-202ENST00000565954 JARID2Q92833 1246 aaPredicted RBP24.04■■□□□ 1.44
CCDC187-202ENST00000565954 CAMTA2O94983 1202 aa24.03■■□□□ 1.44
CCDC187-202ENST00000565954 A0A087WZG4 1122 aa24.03■■□□□ 1.44
CCDC187-202ENST00000565954 PHF14O94880 888 aa24.03■■□□□ 1.44
CCDC187-202ENST00000565954 GPTP24298 496 aa24.03■■□□□ 1.44
CCDC187-202ENST00000565954 CEP85Q6P2H3 762 aa24.03■■□□□ 1.44
CCDC187-202ENST00000565954 CENPQQ7L2Z9 268 aaPredicted RBP24.03■■□□□ 1.44
CCDC187-202ENST00000565954 ISCA1Q9BUE6 129 aa24.03■■□□□ 1.44
CCDC187-202ENST00000565954 CWC25Q9NXE8 425 aaPredicted RBP24.03■■□□□ 1.44
CCDC187-202ENST00000565954 HDAC1Q13547 482 aaPredicted RBP24.02■■□□□ 1.44
CCDC187-202ENST00000565954 CCDC191Q8NCU4 936 aa24.01■■□□□ 1.43
CCDC187-202ENST00000565954 UTYO14607 1347 aa24.01■■□□□ 1.43
CCDC187-202ENST00000565954 HSP90AB3PQ58FF7 597 aa24■■□□□ 1.43
CCDC187-202ENST00000565954 ANKRD44Q8N8A2 993 aa24■■□□□ 1.43
CCDC187-202ENST00000565954 RTL5Q5HYW3 569 aaPredicted RBP24■■□□□ 1.43
CCDC187-202ENST00000565954 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
CCDC187-202ENST00000565954 RPAP2Q8IXW5 612 aaPredicted RBP24■■□□□ 1.43
CCDC187-202ENST00000565954 ANKRD36CQ5JPF3 1778 aa24■■□□□ 1.43
CCDC187-202ENST00000565954 EN1Q05925 392 aaPredicted RBP23.99■■□□□ 1.43
CCDC187-202ENST00000565954 ARHGEF1Q92888 912 aaKnown RBP23.99■■□□□ 1.43
CCDC187-202ENST00000565954 IBTKQ9P2D0 1353 aaPredicted RBP23.99■■□□□ 1.43
CCDC187-202ENST00000565954 SUCLG2Q96I99 432 aa23.98■■□□□ 1.43
CCDC187-202ENST00000565954 BCORQ6W2J9 1755 aa23.98■■□□□ 1.43
CCDC187-202ENST00000565954 TRIM28Q13263 835 aaKnown RBP23.98■■□□□ 1.43
CCDC187-202ENST00000565954 TRAPPC3LQ5T215 181 aa23.98■■□□□ 1.43
CCDC187-202ENST00000565954 SRP68Q9UHB9 627 aaKnown RBP23.98■■□□□ 1.43
CCDC187-202ENST00000565954 UBR3Q6ZT12 1888 aa23.97■■□□□ 1.43
CCDC187-202ENST00000565954 SF3B2Q13435 895 aaKnown RBP23.97■■□□□ 1.43
CCDC187-202ENST00000565954 EZH2Q15910 746 aaKnown RBP23.97■■□□□ 1.43
CCDC187-202ENST00000565954 NLRP10Q86W26 655 aa23.97■■□□□ 1.43
CCDC187-202ENST00000565954 RGPD3A6NKT7 1758 aaPredicted RBP23.97■■□□□ 1.43
CCDC187-202ENST00000565954 RGPD4Q7Z3J3 1758 aa23.97■■□□□ 1.43
CCDC187-202ENST00000565954 USPL1Q5W0Q7 1092 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 ZNF34Q8IZ26 560 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 NARFQ9UHQ1 456 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.96■■□□□ 1.43
CCDC187-202ENST00000565954 PNMA6EA0A0J9YXQ4 647 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 H7C1W4 665 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 ZPR1O75312 459 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 RFC4P35249 363 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 KAZALD1Q96I82 304 aa23.96■■□□□ 1.43
CCDC187-202ENST00000565954 HDAC5Q9UQL6 1122 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms