RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 INTS5Q6P9B9 1019 aaKnown RBP23.61■■□□□ 1.37
COMMD4-213ENST00000565834 PCDHB15Q9Y5E8 787 aa23.61■■□□□ 1.37
COMMD4-213ENST00000565834 LINC00116Q8NCU8 138 aa23.6■■□□□ 1.37
COMMD4-213ENST00000565834 MEIS3Q99687 375 aa23.6■■□□□ 1.37
COMMD4-213ENST00000565834 METTL22Q9BUU2 404 aaPredicted RBP23.6■■□□□ 1.37
COMMD4-213ENST00000565834 ALDH1L1O75891 902 aa23.6■■□□□ 1.37
COMMD4-213ENST00000565834 KIF6Q6ZMV9 814 aa23.6■■□□□ 1.37
COMMD4-213ENST00000565834 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
COMMD4-213ENST00000565834 LINS1Q8NG48 757 aa23.6■■□□□ 1.37
COMMD4-213ENST00000565834 AFDNP55196 1824 aaKnown RBP23.6■■□□□ 1.37
COMMD4-213ENST00000565834 KCNQ4P56696 695 aa23.59■■□□□ 1.37
COMMD4-213ENST00000565834 CNTNAP4Q9C0A0 1308 aa23.58■■□□□ 1.37
COMMD4-213ENST00000565834 GNAI3P08754 354 aa23.57■■□□□ 1.36
COMMD4-213ENST00000565834 MYD88Q99836 296 aa23.57■■□□□ 1.36
COMMD4-213ENST00000565834 ZBTB3Q9H5J0 574 aa23.57■■□□□ 1.36
COMMD4-213ENST00000565834 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
COMMD4-213ENST00000565834 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
COMMD4-213ENST00000565834 CWF19L2Q2TBE0 894 aaKnown RBP23.56■■□□□ 1.36
COMMD4-213ENST00000565834 ARXQ96QS3 562 aa23.56■■□□□ 1.36
COMMD4-213ENST00000565834 USP44Q9H0E7 712 aa23.56■■□□□ 1.36
COMMD4-213ENST00000565834 IGKV5-2P06315 115 aa23.55■■□□□ 1.36
COMMD4-213ENST00000565834 TNS1Q9HBL0 1735 aaKnown RBP23.55■■□□□ 1.36
COMMD4-213ENST00000565834 MAP3K15Q6ZN16 1313 aa23.55■■□□□ 1.36
COMMD4-213ENST00000565834 RC3H1Q5TC82 1133 aaKnown RBP23.54■■□□□ 1.36
COMMD4-213ENST00000565834 RWDD1Q9H446 243 aaPredicted RBP23.54■■□□□ 1.36
COMMD4-213ENST00000565834 C4BP0C0L5 1744 aa23.54■■□□□ 1.36
COMMD4-213ENST00000565834 IBTKQ9P2D0 1353 aaPredicted RBP23.54■■□□□ 1.36
COMMD4-213ENST00000565834 NEURL1BA8MQ27 555 aa23.54■■□□□ 1.36
COMMD4-213ENST00000565834 UBTFL1P0CB47 393 aaPredicted RBP23.54■■□□□ 1.36
COMMD4-213ENST00000565834 CENPQQ7L2Z9 268 aaPredicted RBP23.54■■□□□ 1.36
COMMD4-213ENST00000565834 DZIP3Q86Y13 1208 aaKnown RBP23.54■■□□□ 1.36
COMMD4-213ENST00000565834 KDM2BQ8NHM5 1336 aa23.53■■□□□ 1.36
COMMD4-213ENST00000565834 NUP98P52948 1817 aa23.53■■□□□ 1.36
COMMD4-213ENST00000565834 GNAI2P04899 355 aa23.53■■□□□ 1.36
COMMD4-213ENST00000565834 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
COMMD4-213ENST00000565834 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
COMMD4-213ENST00000565834 IGHDP01880 384 aa23.52■■□□□ 1.36
COMMD4-213ENST00000565834 C9orf78Q9NZ63 289 aaPredicted RBP23.52■■□□□ 1.36
COMMD4-213ENST00000565834 COL15A1P39059 1388 aa23.52■■□□□ 1.36
COMMD4-213ENST00000565834 HDAC1Q13547 482 aaPredicted RBP23.51■■□□□ 1.35
COMMD4-213ENST00000565834 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
COMMD4-213ENST00000565834 APBA3O96018 575 aa23.51■■□□□ 1.35
COMMD4-213ENST00000565834 LRRC4BQ9NT99 713 aa23.51■■□□□ 1.35
COMMD4-213ENST00000565834 TBC1D2BQ9UPU7 963 aa23.51■■□□□ 1.35
COMMD4-213ENST00000565834 ERVV-1B6SEH8 477 aa23.5■■□□□ 1.35
COMMD4-213ENST00000565834 GRM8O00222 908 aa23.5■■□□□ 1.35
COMMD4-213ENST00000565834 PLSCR1O15162 318 aa23.5■■□□□ 1.35
COMMD4-213ENST00000565834 NBPF7P0C2Y1 421 aaPredicted RBP23.5■■□□□ 1.35
COMMD4-213ENST00000565834 GCKRQ14397 625 aa23.5■■□□□ 1.35
COMMD4-213ENST00000565834 GIGYF2Q6Y7W6 1299 aaKnown RBP23.5■■□□□ 1.35
COMMD4-213ENST00000565834 A0A087WZG4 1122 aa23.49■■□□□ 1.35
COMMD4-213ENST00000565834 TCIRG1Q13488 830 aa23.49■■□□□ 1.35
COMMD4-213ENST00000565834 RPAP2Q8IXW5 612 aaPredicted RBP23.49■■□□□ 1.35
COMMD4-213ENST00000565834 LRRFIP2Q9Y608 721 aaKnown RBP23.49■■□□□ 1.35
COMMD4-213ENST00000565834 RGPD3A6NKT7 1758 aaPredicted RBP23.49■■□□□ 1.35
COMMD4-213ENST00000565834 RGPD4Q7Z3J3 1758 aa23.49■■□□□ 1.35
COMMD4-213ENST00000565834 BCORQ6W2J9 1755 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 GNPATO15228 680 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 RPS6KA4O75676 772 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 HSP90AB3PQ58FF7 597 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 CEP85Q6P2H3 762 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 ANKRD44Q8N8A2 993 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 HDAC5Q9UQL6 1122 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 UTYO14607 1347 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 HMGB2P26583 209 aaKnown RBP23.48■■□□□ 1.35
COMMD4-213ENST00000565834 HLFQ16534 295 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 TXNRD1Q16881 649 aa23.48■■□□□ 1.35
COMMD4-213ENST00000565834 CCDC191Q8NCU4 936 aa23.47■■□□□ 1.35
COMMD4-213ENST00000565834 AK7Q96M32 723 aa23.47■■□□□ 1.35
COMMD4-213ENST00000565834 ISCA1Q9BUE6 129 aa23.47■■□□□ 1.35
COMMD4-213ENST00000565834 CWC25Q9NXE8 425 aaPredicted RBP23.47■■□□□ 1.35
COMMD4-213ENST00000565834 SIRT2Q8IXJ6 389 aa23.46■■□□□ 1.35
COMMD4-213ENST00000565834 RTCBQ9Y3I0 505 aaKnown RBP23.46■■□□□ 1.35
COMMD4-213ENST00000565834 CAMTA2O94983 1202 aa23.44■■□□□ 1.34
COMMD4-213ENST00000565834 TRIM28Q13263 835 aaKnown RBP23.44■■□□□ 1.34
COMMD4-213ENST00000565834 SCN7AQ01118 1682 aa23.44■■□□□ 1.34
COMMD4-213ENST00000565834 UBR3Q6ZT12 1888 aa23.44■■□□□ 1.34
COMMD4-213ENST00000565834 PROM2Q8N271 834 aa23.44■■□□□ 1.34
COMMD4-213ENST00000565834 HMMRO75330 724 aa23.43■■□□□ 1.34
COMMD4-213ENST00000565834 C4AP0C0L4 1744 aa23.42■■□□□ 1.34
COMMD4-213ENST00000565834 UBE3BQ7Z3V4 1068 aa23.41■■□□□ 1.34
COMMD4-213ENST00000565834 ZNF652Q9Y2D9 606 aa23.41■■□□□ 1.34
COMMD4-213ENST00000565834 GPTP24298 496 aa23.41■■□□□ 1.34
COMMD4-213ENST00000565834 ATP8B2P98198 1209 aa23.41■■□□□ 1.34
COMMD4-213ENST00000565834 SUCLG2Q96I99 432 aa23.41■■□□□ 1.34
COMMD4-213ENST00000565834 H7C1W4 665 aa23.4■■□□□ 1.34
COMMD4-213ENST00000565834 RGL2O15211 777 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 ILDR2Q71H61 639 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 SMIM5Q71RC9 77 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 NLRP10Q86W26 655 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 SMC5Q8IY18 1101 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 ZNF34Q8IZ26 560 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 NARFQ9UHQ1 456 aa23.39■■□□□ 1.34
COMMD4-213ENST00000565834 ADRA2BP18089 450 aa23.38■■□□□ 1.33
COMMD4-213ENST00000565834 CASP7P55210 303 aa23.38■■□□□ 1.33
COMMD4-213ENST00000565834 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
COMMD4-213ENST00000565834 CLEC4GQ6UXB4 293 aa23.38■■□□□ 1.33
COMMD4-213ENST00000565834 AMIGO3Q86WK7 504 aa23.38■■□□□ 1.33
COMMD4-213ENST00000565834 JARID2Q92833 1246 aaPredicted RBP23.38■■□□□ 1.33
COMMD4-213ENST00000565834 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 406.9 ms