RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
CNOT1-208ENST00000565697 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
CNOT1-208ENST00000565697 FKBP8Q14318 412 aa12.99□□□□□ -0.33
CNOT1-208ENST00000565697 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
CNOT1-208ENST00000565697 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-208ENST00000565697 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
CNOT1-208ENST00000565697 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
CNOT1-208ENST00000565697 A1BGP04217 495 aa12.98□□□□□ -0.33
CNOT1-208ENST00000565697 TGFB2P61812 414 aa12.98□□□□□ -0.33
CNOT1-208ENST00000565697 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
CNOT1-208ENST00000565697 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
CNOT1-208ENST00000565697 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
CNOT1-208ENST00000565697 YY1P25490 414 aa12.97□□□□□ -0.33
CNOT1-208ENST00000565697 TM4SF1P30408 202 aa12.97□□□□□ -0.33
CNOT1-208ENST00000565697 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
CNOT1-208ENST00000565697 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
CNOT1-208ENST00000565697 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
CNOT1-208ENST00000565697 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-208ENST00000565697 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-208ENST00000565697 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.34
CNOT1-208ENST00000565697 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
CNOT1-208ENST00000565697 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
CNOT1-208ENST00000565697 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
CNOT1-208ENST00000565697 NFIXQ14938 502 aa12.95□□□□□ -0.34
CNOT1-208ENST00000565697 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
CNOT1-208ENST00000565697 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
CNOT1-208ENST00000565697 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
CNOT1-208ENST00000565697 RGL2O15211 777 aa12.94□□□□□ -0.34
CNOT1-208ENST00000565697 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
CNOT1-208ENST00000565697 DDR1Q08345 913 aa12.94□□□□□ -0.34
CNOT1-208ENST00000565697 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
CNOT1-208ENST00000565697 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
CNOT1-208ENST00000565697 CHD4Q14839 1912 aa12.94□□□□□ -0.34
CNOT1-208ENST00000565697 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
CNOT1-208ENST00000565697 APAF1O14727 1248 aa12.93□□□□□ -0.34
CNOT1-208ENST00000565697 SERPINB2P05120 415 aa12.93□□□□□ -0.34
CNOT1-208ENST00000565697 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
CNOT1-208ENST00000565697 CLEC4GQ6UXB4 293 aa12.93□□□□□ -0.34
CNOT1-208ENST00000565697 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
CNOT1-208ENST00000565697 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
CNOT1-208ENST00000565697 CHL1O00533 1208 aa12.92□□□□□ -0.34
CNOT1-208ENST00000565697 CAMTA2O94983 1202 aa12.92□□□□□ -0.34
CNOT1-208ENST00000565697 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
CNOT1-208ENST00000565697 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
CNOT1-208ENST00000565697 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
CNOT1-208ENST00000565697 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
CNOT1-208ENST00000565697 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 DPEP1P16444 411 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 PIP4K2AP48426 406 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-208ENST00000565697 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
CNOT1-208ENST00000565697 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 CARMIL3Q8ND23 1372 aa12.91□□□□□ -0.34
CNOT1-208ENST00000565697 A0A0G2JLW4 131 aa12.9□□□□□ -0.34
CNOT1-208ENST00000565697 NPHP1O15259 732 aa12.9□□□□□ -0.34
CNOT1-208ENST00000565697 CCDC184Q52MB2 194 aa12.9□□□□□ -0.34
CNOT1-208ENST00000565697 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
CNOT1-208ENST00000565697 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
CNOT1-208ENST00000565697 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-208ENST00000565697 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
CNOT1-208ENST00000565697 NRXN2Q9P2S2 1712 aa12.89□□□□□ -0.35
CNOT1-208ENST00000565697 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
CNOT1-208ENST00000565697 HOXB7P09629 217 aa12.89□□□□□ -0.35
CNOT1-208ENST00000565697 GNAI1P63096 354 aa12.89□□□□□ -0.35
CNOT1-208ENST00000565697 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
CNOT1-208ENST00000565697 AFDNP55196 1824 aaKnown RBP12.89□□□□□ -0.35
CNOT1-208ENST00000565697 BCORQ6W2J9 1755 aa12.89□□□□□ -0.35
CNOT1-208ENST00000565697 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-208ENST00000565697 MYL6BP14649 208 aa12.88□□□□□ -0.35
CNOT1-208ENST00000565697 EIF2S2P20042 333 aaKnown RBP12.88□□□□□ -0.35
CNOT1-208ENST00000565697 ST5P78524 1137 aa12.88□□□□□ -0.35
CNOT1-208ENST00000565697 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
CNOT1-208ENST00000565697 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
CNOT1-208ENST00000565697 H0YIN7 160 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 PDE6BP35913 854 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 CCDC27Q2M243 656 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 DALRD3Q5D0E6 543 aaKnown RBP12.87□□□□□ -0.35
CNOT1-208ENST00000565697 TPTE2Q6XPS3 522 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNOT1-208ENST00000565697 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
CNOT1-208ENST00000565697 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
CNOT1-208ENST00000565697 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
CNOT1-208ENST00000565697 KCNA3P22001 575 aa12.86□□□□□ -0.35
CNOT1-208ENST00000565697 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
CNOT1-208ENST00000565697 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-208ENST00000565697 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
CNOT1-208ENST00000565697 CHRNA5P30532 468 aa12.85□□□□□ -0.35
CNOT1-208ENST00000565697 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
CNOT1-208ENST00000565697 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-208ENST00000565697 BRCA1P38398 1863 aaKnown RBP12.85□□□□□ -0.35
CNOT1-208ENST00000565697 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-208ENST00000565697 HLFQ16534 295 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms