RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
CAPN3-215ENST00000565559 DLEC1Q9Y238 1755 aa15.43■□□□□ 0.06
CAPN3-215ENST00000565559 CCDC88AQ3V6T2 1871 aa15.42■□□□□ 0.06
CAPN3-215ENST00000565559 PDE6BP35913 854 aa15.42■□□□□ 0.06
CAPN3-215ENST00000565559 ECE1P42892 770 aa15.42■□□□□ 0.06
CAPN3-215ENST00000565559 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
CAPN3-215ENST00000565559 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
CAPN3-215ENST00000565559 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
CAPN3-215ENST00000565559 MTHFSP49914 203 aa15.41■□□□□ 0.06
CAPN3-215ENST00000565559 ZNF530Q6P9A1 599 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-215ENST00000565559 PNMA8AQ86V59 439 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-215ENST00000565559 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
CAPN3-215ENST00000565559 AMOTQ4VCS5 1084 aa15.4■□□□□ 0.06
CAPN3-215ENST00000565559 C1orf141Q5JVX7 400 aa15.4■□□□□ 0.06
CAPN3-215ENST00000565559 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
CAPN3-215ENST00000565559 ZNF579Q8NAF0 562 aaKnown RBP15.4■□□□□ 0.06
CAPN3-215ENST00000565559 COL15A1P39059 1388 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 KIF20BQ96Q89 1820 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 GSE1Q14687 1217 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 BRIP1Q9BX63 1249 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 MCOLN1Q9GZU1 580 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
CAPN3-215ENST00000565559 EPHX2P34913 555 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 GRM1Q13255 1194 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 MAP1SQ66K74 1059 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-215ENST00000565559 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 CAPNS2Q96L46 248 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 GPR101Q96P66 508 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-215ENST00000565559 DICER1Q9UPY3 1922 aaKnown RBP15.38■□□□□ 0.05
CAPN3-215ENST00000565559 SCN4AP35499 1836 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 AFDNP55196 1824 aaKnown RBP15.38■□□□□ 0.05
CAPN3-215ENST00000565559 PDE4DIPQ5VU43 2346 aa15.38■□□□□ 0.05
CAPN3-215ENST00000565559 CA12O43570 354 aa15.37■□□□□ 0.05
CAPN3-215ENST00000565559 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
CAPN3-215ENST00000565559 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
CAPN3-215ENST00000565559 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
CAPN3-215ENST00000565559 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
CAPN3-215ENST00000565559 TJP1Q07157 1748 aa15.36■□□□□ 0.05
CAPN3-215ENST00000565559 ANKRD26Q9UPS8 1709 aa15.35■□□□□ 0.05
CAPN3-215ENST00000565559 NPHP1O15259 732 aa15.35■□□□□ 0.05
CAPN3-215ENST00000565559 PYGBP11216 843 aa15.35■□□□□ 0.05
CAPN3-215ENST00000565559 CDCA8Q53HL2 280 aa15.35■□□□□ 0.05
CAPN3-215ENST00000565559 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
CAPN3-215ENST00000565559 TSKSQ9UJT2 592 aa15.35■□□□□ 0.05
CAPN3-215ENST00000565559 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
CAPN3-215ENST00000565559 GABBR2O75899 941 aa15.34■□□□□ 0.05
CAPN3-215ENST00000565559 CYP19A1P11511 503 aaPredicted RBP15.34■□□□□ 0.05
CAPN3-215ENST00000565559 DGKZQ13574 1117 aa15.34■□□□□ 0.05
CAPN3-215ENST00000565559 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
CAPN3-215ENST00000565559 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
CAPN3-215ENST00000565559 A0A087WZG4 1122 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 MAP2K2P36507 400 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 PRPF38BQ5VTL8 546 aaKnown RBP15.33■□□□□ 0.04
CAPN3-215ENST00000565559 STYK1Q6J9G0 422 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 POLKQ9UBT6 870 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 ZNF541Q9H0D2 1346 aa15.33■□□□□ 0.04
CAPN3-215ENST00000565559 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
CAPN3-215ENST00000565559 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
CAPN3-215ENST00000565559 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
CAPN3-215ENST00000565559 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
CAPN3-215ENST00000565559 MASTLQ96GX5 879 aa15.31■□□□□ 0.04
CAPN3-215ENST00000565559 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
CAPN3-215ENST00000565559 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
CAPN3-215ENST00000565559 ST5P78524 1137 aa15.3■□□□□ 0.04
CAPN3-215ENST00000565559 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
CAPN3-215ENST00000565559 CNBD1Q8NA66 436 aa15.3■□□□□ 0.04
CAPN3-215ENST00000565559 CARD14Q9BXL6 1004 aa15.3■□□□□ 0.04
CAPN3-215ENST00000565559 TNRC18O15417 2968 aaPredicted RBP15.29■□□□□ 0.04
CAPN3-215ENST00000565559 MAP3K13O43283 966 aa15.29■□□□□ 0.04
CAPN3-215ENST00000565559 SRGNP10124 158 aa15.29■□□□□ 0.04
CAPN3-215ENST00000565559 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
CAPN3-215ENST00000565559 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
CAPN3-215ENST00000565559 TBC1D9BQ66K14 1250 aa15.29■□□□□ 0.04
CAPN3-215ENST00000565559 GPC2Q8N158 579 aa15.29■□□□□ 0.04
CAPN3-215ENST00000565559 AOC2O75106 756 aa15.28■□□□□ 0.04
CAPN3-215ENST00000565559 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
CAPN3-215ENST00000565559 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-215ENST00000565559 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
CAPN3-215ENST00000565559 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.04
CAPN3-215ENST00000565559 BRPF1P55201 1214 aaPredicted RBP15.27■□□□□ 0.04
CAPN3-215ENST00000565559 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
CAPN3-215ENST00000565559 SETDB2Q96T68 719 aa15.27■□□□□ 0.04
CAPN3-215ENST00000565559 COL11A2P13942 1736 aaPredicted RBP15.26■□□□□ 0.03
CAPN3-215ENST00000565559 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
CAPN3-215ENST00000565559 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
CAPN3-215ENST00000565559 STARD3NLO95772 234 aa15.26■□□□□ 0.03
CAPN3-215ENST00000565559 SOX10P56693 466 aa15.26■□□□□ 0.03
CAPN3-215ENST00000565559 NPM2Q86SE8 214 aaKnown RBP15.26■□□□□ 0.03
CAPN3-215ENST00000565559 RTKN2Q8IZC4 609 aa15.26■□□□□ 0.03
CAPN3-215ENST00000565559 JDP2Q8WYK2 163 aa15.26■□□□□ 0.03
CAPN3-215ENST00000565559 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
CAPN3-215ENST00000565559 FZD9O00144 591 aa15.25■□□□□ 0.03
CAPN3-215ENST00000565559 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
CAPN3-215ENST00000565559 SLC39A6Q13433 755 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms