RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
TCF4-228ENST00000565393 KIF6Q6ZMV9 814 aa8.42□□□□□ -1.06
TCF4-228ENST00000565393 CCDC146Q8IYE0 955 aa8.42□□□□□ -1.06
TCF4-228ENST00000565393 COL5A3P25940 1745 aaPredicted RBP8.42□□□□□ -1.06
TCF4-228ENST00000565393 TJP1Q07157 1748 aa8.42□□□□□ -1.06
TCF4-228ENST00000565393 MYBBP1AQ9BQG0 1328 aaKnown RBP8.41□□□□□ -1.06
TCF4-228ENST00000565393 GLTPD2A6NH11 291 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 ERVV-1B6SEH8 477 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 VEGFAP15692 232 aaPredicted RBP8.41□□□□□ -1.06
TCF4-228ENST00000565393 NPR1P16066 1061 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 ALDH1B1P30837 517 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 APLP1P51693 650 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 LMOD3Q0VAK6 560 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 TTLL7Q6ZT98 887 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
TCF4-228ENST00000565393 CHD4Q14839 1912 aa8.41□□□□□ -1.06
TCF4-228ENST00000565393 NFKBIEO00221 500 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 GPTP24298 496 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 PRELPP51888 382 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 AIMP1Q12904 312 aaKnown RBP8.4□□□□□ -1.06
TCF4-228ENST00000565393 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
TCF4-228ENST00000565393 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
TCF4-228ENST00000565393 NYXQ9GZU5 481 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
TCF4-228ENST00000565393 N4BP2Q86UW6 1770 aaPredicted RBP8.4□□□□□ -1.07
TCF4-228ENST00000565393 MAP3K15Q6ZN16 1313 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 RGL2O15211 777 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 FSTL1Q12841 308 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 TAOK3Q9H2K8 898 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 ADAMTS7Q9UKP4 1686 aa8.39□□□□□ -1.07
TCF4-228ENST00000565393 KLRG2A4D1S0 409 aaPredicted RBP8.38□□□□□ -1.07
TCF4-228ENST00000565393 TCERG1O14776 1098 aaKnown RBP8.38□□□□□ -1.07
TCF4-228ENST00000565393 CCDC93Q567U6 631 aa8.38□□□□□ -1.07
TCF4-228ENST00000565393 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
TCF4-228ENST00000565393 RTKN2Q8IZC4 609 aa8.38□□□□□ -1.07
TCF4-228ENST00000565393 RPGRQ92834 1020 aaKnown RBP8.38□□□□□ -1.07
TCF4-228ENST00000565393 TMX4Q9H1E5 349 aaPredicted RBP8.38□□□□□ -1.07
TCF4-228ENST00000565393 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
TCF4-228ENST00000565393 ZC3H4Q9UPT8 1303 aaKnown RBP8.37□□□□□ -1.07
TCF4-228ENST00000565393 CHL1O00533 1208 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 DDNO94850 711 aaPredicted RBP8.37□□□□□ -1.07
TCF4-228ENST00000565393 ANXA1P04083 346 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 HTRA3P83110 453 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 OLFM4Q6UX06 510 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 GIGYF2Q6Y7W6 1299 aaKnown RBP8.37□□□□□ -1.07
TCF4-228ENST00000565393 COPS6Q7L5N1 327 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 ZNF34Q8IZ26 560 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 C7orf43Q8WVR3 580 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
TCF4-228ENST00000565393 NLRP3Q96P20 1036 aa8.37□□□□□ -1.07
TCF4-228ENST00000565393 ZNF277Q9NRM2 450 aaPredicted RBP8.37□□□□□ -1.07
TCF4-228ENST00000565393 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
TCF4-228ENST00000565393 PDIA6Q15084 440 aa8.36□□□□□ -1.07
TCF4-228ENST00000565393 PARP10Q53GL7 1025 aa8.36□□□□□ -1.07
TCF4-228ENST00000565393 XAGE3Q8WTP9 111 aa8.36□□□□□ -1.07
TCF4-228ENST00000565393 UTP14AQ9BVJ6 771 aaKnown RBP8.36□□□□□ -1.07
TCF4-228ENST00000565393 PRKRIP1Q9H875 184 aaPredicted RBP8.36□□□□□ -1.07
TCF4-228ENST00000565393 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
TCF4-228ENST00000565393 KIF13BQ9NQT8 1826 aa8.36□□□□□ -1.07
TCF4-228ENST00000565393 ERBB4Q15303 1308 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 POTECB2RU33 542 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 APAF1O14727 1248 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 KRT24Q2M2I5 525 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 PROSER3Q2NL68 480 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 DNAJC5GQ8N7S2 189 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 JDP2Q8WYK2 163 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 ZNF428Q96B54 188 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 CLEC11AQ9Y240 323 aa8.35□□□□□ -1.07
TCF4-228ENST00000565393 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 ELL2O00472 640 aaPredicted RBP8.34□□□□□ -1.07
TCF4-228ENST00000565393 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
TCF4-228ENST00000565393 CRY2Q49AN0 593 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 HSP90AB3PQ58FF7 597 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 HDGFL1Q5TGJ6 251 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 ANKRD13DQ6ZTN6 518 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 CRAMP1Q96RY5 1269 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 DDX21Q9NR30 783 aaKnown RBP eCLIP8.34□□□□□ -1.07
TCF4-228ENST00000565393 TRMT112Q9UI30 125 aaKnown RBP8.34□□□□□ -1.07
TCF4-228ENST00000565393 UBR2Q8IWV8 1755 aa8.34□□□□□ -1.07
TCF4-228ENST00000565393 UBN2Q6ZU65 1347 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 IQCA1LA6NCM1 817 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 PPEF1O14829 653 aaPredicted RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 NTSR2O95665 410 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 HCLS1P14317 486 aaPredicted RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 ZEB1P37275 1124 aaPredicted RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 EIF6P56537 245 aaKnown RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 CALD1Q05682 793 aaKnown RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 TCIRG1Q13488 830 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 GRIPAP1Q4V328 841 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms