RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PRR5LQ6MZQ0 368 aa17.85■□□□□ 0.45
VPS9D1-204ENST00000565023 NECTIN2Q92692 538 aa17.85■□□□□ 0.45
VPS9D1-204ENST00000565023 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
VPS9D1-204ENST00000565023 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
VPS9D1-204ENST00000565023 HLFQ16534 295 aa17.84■□□□□ 0.45
VPS9D1-204ENST00000565023 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
VPS9D1-204ENST00000565023 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
VPS9D1-204ENST00000565023 H0YIN7 160 aa17.83■□□□□ 0.44
VPS9D1-204ENST00000565023 TTLL7Q6ZT98 887 aa17.83■□□□□ 0.44
VPS9D1-204ENST00000565023 ZNF622Q969S3 477 aaKnown RBP eCLIP17.83■□□□□ 0.44
VPS9D1-204ENST00000565023 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
VPS9D1-204ENST00000565023 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.44
VPS9D1-204ENST00000565023 NUP98P52948 1817 aa17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 COL11A2P13942 1736 aaPredicted RBP17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 APAF1O14727 1248 aa17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 ANXA1P04083 346 aa17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 ST5P78524 1137 aa17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
VPS9D1-204ENST00000565023 KIF6Q6ZMV9 814 aa17.81■□□□□ 0.44
VPS9D1-204ENST00000565023 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
VPS9D1-204ENST00000565023 PDE6BP35913 854 aa17.8■□□□□ 0.44
VPS9D1-204ENST00000565023 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
VPS9D1-204ENST00000565023 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
VPS9D1-204ENST00000565023 ADCY9O60503 1353 aa17.79■□□□□ 0.44
VPS9D1-204ENST00000565023 RASSF7Q02833 373 aa17.79■□□□□ 0.44
VPS9D1-204ENST00000565023 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
VPS9D1-204ENST00000565023 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
VPS9D1-204ENST00000565023 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 GPTP24298 496 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 C9orf131Q5VYM1 1079 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 SBF1O95248 1867 aa17.78■□□□□ 0.44
VPS9D1-204ENST00000565023 CHL1O00533 1208 aa17.77■□□□□ 0.44
VPS9D1-204ENST00000565023 HSPA6P17066 643 aa17.77■□□□□ 0.44
VPS9D1-204ENST00000565023 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-204ENST00000565023 MRS2Q9HD23 443 aa17.77■□□□□ 0.44
VPS9D1-204ENST00000565023 TPTE2Q6XPS3 522 aa17.76■□□□□ 0.43
VPS9D1-204ENST00000565023 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
VPS9D1-204ENST00000565023 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
VPS9D1-204ENST00000565023 SLX4Q8IY92 1834 aa17.75■□□□□ 0.43
VPS9D1-204ENST00000565023 PDIA6Q15084 440 aa17.75■□□□□ 0.43
VPS9D1-204ENST00000565023 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
VPS9D1-204ENST00000565023 ERVV-1B6SEH8 477 aa17.74■□□□□ 0.43
VPS9D1-204ENST00000565023 C21orf2O43822 256 aa17.74■□□□□ 0.43
VPS9D1-204ENST00000565023 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
VPS9D1-204ENST00000565023 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
VPS9D1-204ENST00000565023 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
VPS9D1-204ENST00000565023 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
VPS9D1-204ENST00000565023 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
VPS9D1-204ENST00000565023 TNRC6CQ9HCJ0 1690 aaKnown RBP17.73■□□□□ 0.43
VPS9D1-204ENST00000565023 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 SRGNP10124 158 aa17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 MASTLQ96GX5 879 aa17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
VPS9D1-204ENST00000565023 ABCC12Q96J65 1359 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 RGL2O15211 777 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 ERFEQ4G0M1 354 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 STYK1Q6J9G0 422 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 LRP10Q7Z4F1 713 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 CNKSR1Q969H4 720 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
VPS9D1-204ENST00000565023 PCNTO95613 3336 aa17.7■□□□□ 0.42
VPS9D1-204ENST00000565023 GNAI1P63096 354 aa17.7■□□□□ 0.42
VPS9D1-204ENST00000565023 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-204ENST00000565023 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-204ENST00000565023 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
VPS9D1-204ENST00000565023 NFKBIEO00221 500 aa17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 NPR1P16066 1061 aa17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 PRELPP51888 382 aa17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 TIAM2Q8IVF5 1701 aa17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
VPS9D1-204ENST00000565023 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
VPS9D1-204ENST00000565023 ZNF34Q8IZ26 560 aa17.68■□□□□ 0.42
VPS9D1-204ENST00000565023 NMRK2Q9NPI5 230 aa17.68■□□□□ 0.42
VPS9D1-204ENST00000565023 LMNB1P20700 586 aa17.67■□□□□ 0.42
VPS9D1-204ENST00000565023 NTSR2O95665 410 aa17.66■□□□□ 0.42
VPS9D1-204ENST00000565023 OLFM4Q6UX06 510 aa17.66■□□□□ 0.42
VPS9D1-204ENST00000565023 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
VPS9D1-204ENST00000565023 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
VPS9D1-204ENST00000565023 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-204ENST00000565023 KIF3CO14782 793 aa17.65■□□□□ 0.42
VPS9D1-204ENST00000565023 HOXB7P09629 217 aa17.65■□□□□ 0.42
VPS9D1-204ENST00000565023 PARP10Q53GL7 1025 aa17.65■□□□□ 0.42
VPS9D1-204ENST00000565023 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
VPS9D1-204ENST00000565023 RPGRQ92834 1020 aaKnown RBP17.65■□□□□ 0.42
VPS9D1-204ENST00000565023 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms