RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
RAB40C-208ENST00000564703 BCL2L12Q9HB09 334 aa20.55■□□□□ 0.88
RAB40C-208ENST00000564703 C4AP0C0L4 1744 aa20.54■□□□□ 0.88
RAB40C-208ENST00000564703 RGL2O15211 777 aa20.54■□□□□ 0.88
RAB40C-208ENST00000564703 NFIXQ14938 502 aa20.54■□□□□ 0.88
RAB40C-208ENST00000564703 TTLL7Q6ZT98 887 aa20.54■□□□□ 0.88
RAB40C-208ENST00000564703 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
RAB40C-208ENST00000564703 CDCA7LQ96GN5 454 aa20.54■□□□□ 0.88
RAB40C-208ENST00000564703 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
RAB40C-208ENST00000564703 NPHP1O15259 732 aa20.53■□□□□ 0.88
RAB40C-208ENST00000564703 VAMP4O75379 141 aa20.53■□□□□ 0.88
RAB40C-208ENST00000564703 FHDC1Q9C0D6 1143 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-208ENST00000564703 ZBTB3Q9H5J0 574 aa20.53■□□□□ 0.88
RAB40C-208ENST00000564703 TBC1D9BQ66K14 1250 aa20.52■□□□□ 0.88
RAB40C-208ENST00000564703 TCERG1O14776 1098 aaKnown RBP20.51■□□□□ 0.87
RAB40C-208ENST00000564703 SLC4A2P04920 1241 aa20.51■□□□□ 0.87
RAB40C-208ENST00000564703 SERPINB2P05120 415 aa20.51■□□□□ 0.87
RAB40C-208ENST00000564703 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
RAB40C-208ENST00000564703 POLRMTO00411 1230 aaKnown RBP20.5■□□□□ 0.87
RAB40C-208ENST00000564703 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
RAB40C-208ENST00000564703 HLFQ16534 295 aa20.5■□□□□ 0.87
RAB40C-208ENST00000564703 GIGYF2Q6Y7W6 1299 aaKnown RBP20.5■□□□□ 0.87
RAB40C-208ENST00000564703 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
RAB40C-208ENST00000564703 SYT17Q9BSW7 474 aa20.5■□□□□ 0.87
RAB40C-208ENST00000564703 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
RAB40C-208ENST00000564703 CD2APQ9Y5K6 639 aa20.5■□□□□ 0.87
RAB40C-208ENST00000564703 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
RAB40C-208ENST00000564703 DDR1Q08345 913 aa20.49■□□□□ 0.87
RAB40C-208ENST00000564703 HSP90AB3PQ58FF7 597 aa20.49■□□□□ 0.87
RAB40C-208ENST00000564703 PLBD2Q8NHP8 589 aa20.49■□□□□ 0.87
RAB40C-208ENST00000564703 DCAF8L1A6NGE4 600 aa20.48■□□□□ 0.87
RAB40C-208ENST00000564703 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
RAB40C-208ENST00000564703 TRMT2AQ8IZ69 625 aaKnown RBP20.48■□□□□ 0.87
RAB40C-208ENST00000564703 PHAXQ9H814 394 aaKnown RBP20.48■□□□□ 0.87
RAB40C-208ENST00000564703 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-208ENST00000564703 TPTE2Q6XPS3 522 aa20.47■□□□□ 0.87
RAB40C-208ENST00000564703 NBPF5PQ86XG9 351 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-208ENST00000564703 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
RAB40C-208ENST00000564703 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
RAB40C-208ENST00000564703 FAM177BA6PVY3 158 aa20.45■□□□□ 0.86
RAB40C-208ENST00000564703 TCIRG1Q13488 830 aa20.45■□□□□ 0.86
RAB40C-208ENST00000564703 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
RAB40C-208ENST00000564703 GPTP24298 496 aa20.44■□□□□ 0.86
RAB40C-208ENST00000564703 PPP1R42Q7Z4L9 355 aa20.44■□□□□ 0.86
RAB40C-208ENST00000564703 CNBD1Q8NA66 436 aa20.44■□□□□ 0.86
RAB40C-208ENST00000564703 NYXQ9GZU5 481 aa20.44■□□□□ 0.86
RAB40C-208ENST00000564703 CT47B1P0C2W7 299 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-208ENST00000564703 TGFB2P61812 414 aa20.43■□□□□ 0.86
RAB40C-208ENST00000564703 ST5P78524 1137 aa20.43■□□□□ 0.86
RAB40C-208ENST00000564703 PARP10Q53GL7 1025 aa20.43■□□□□ 0.86
RAB40C-208ENST00000564703 ZNF34Q8IZ26 560 aa20.43■□□□□ 0.86
RAB40C-208ENST00000564703 NUP98P52948 1817 aa20.42■□□□□ 0.86
RAB40C-208ENST00000564703 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
RAB40C-208ENST00000564703 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
RAB40C-208ENST00000564703 CACNA1FO60840 1977 aa20.41■□□□□ 0.86
RAB40C-208ENST00000564703 FLIIQ13045 1269 aa20.41■□□□□ 0.86
RAB40C-208ENST00000564703 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-208ENST00000564703 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
RAB40C-208ENST00000564703 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
RAB40C-208ENST00000564703 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
RAB40C-208ENST00000564703 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
RAB40C-208ENST00000564703 G2E3Q7L622 706 aa20.4■□□□□ 0.86
RAB40C-208ENST00000564703 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
RAB40C-208ENST00000564703 BRIP1Q9BX63 1249 aa20.4■□□□□ 0.86
RAB40C-208ENST00000564703 ATP10DQ9P241 1426 aa20.39■□□□□ 0.85
RAB40C-208ENST00000564703 PDE6BP35913 854 aa20.39■□□□□ 0.85
RAB40C-208ENST00000564703 SUSD4Q5VX71 490 aa20.39■□□□□ 0.85
RAB40C-208ENST00000564703 NLGN2Q8NFZ4 835 aa20.39■□□□□ 0.85
RAB40C-208ENST00000564703 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
RAB40C-208ENST00000564703 MAP3K2Q9Y2U5 619 aa20.39■□□□□ 0.85
RAB40C-208ENST00000564703 A0A0G2JLW4 131 aa20.38■□□□□ 0.85
RAB40C-208ENST00000564703 ATP5J2-PTCD1G3V325 749 aa20.38■□□□□ 0.85
RAB40C-208ENST00000564703 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
RAB40C-208ENST00000564703 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
RAB40C-208ENST00000564703 CCDC24Q8N4L8 307 aa20.38■□□□□ 0.85
RAB40C-208ENST00000564703 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-208ENST00000564703 PDZRN3Q9UPQ7 1066 aa20.38■□□□□ 0.85
RAB40C-208ENST00000564703 H0YIN7 160 aa20.37■□□□□ 0.85
RAB40C-208ENST00000564703 GPR162Q16538 588 aa20.37■□□□□ 0.85
RAB40C-208ENST00000564703 MYD88Q99836 296 aa20.37■□□□□ 0.85
RAB40C-208ENST00000564703 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
RAB40C-208ENST00000564703 DPEP1P16444 411 aa20.36■□□□□ 0.85
RAB40C-208ENST00000564703 NLRP10Q86W26 655 aa20.36■□□□□ 0.85
RAB40C-208ENST00000564703 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
RAB40C-208ENST00000564703 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
RAB40C-208ENST00000564703 AFDNP55196 1824 aaKnown RBP20.36■□□□□ 0.85
RAB40C-208ENST00000564703 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
RAB40C-208ENST00000564703 UBN2Q6ZU65 1347 aa20.35■□□□□ 0.85
RAB40C-208ENST00000564703 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
RAB40C-208ENST00000564703 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
RAB40C-208ENST00000564703 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
RAB40C-208ENST00000564703 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
RAB40C-208ENST00000564703 ISCA1Q9BUE6 129 aa20.35■□□□□ 0.85
RAB40C-208ENST00000564703 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
RAB40C-208ENST00000564703 CCDC191Q8NCU4 936 aa20.34■□□□□ 0.85
RAB40C-208ENST00000564703 DNAAF4Q8WXU2 420 aa20.34■□□□□ 0.85
RAB40C-208ENST00000564703 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
RAB40C-208ENST00000564703 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
RAB40C-208ENST00000564703 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
RAB40C-208ENST00000564703 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms