RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 CNKSR1Q969H4 720 aa18.87■□□□□ 0.61
CDR2-204ENST00000564542 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
CDR2-204ENST00000564542 ZNF219Q9P2Y4 722 aaPredicted RBP18.87■□□□□ 0.61
CDR2-204ENST00000564542 SLX4Q8IY92 1834 aa18.86■□□□□ 0.61
CDR2-204ENST00000564542 POTECB2RU33 542 aa18.86■□□□□ 0.61
CDR2-204ENST00000564542 SRGNP10124 158 aa18.86■□□□□ 0.61
CDR2-204ENST00000564542 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
CDR2-204ENST00000564542 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
CDR2-204ENST00000564542 PRPF40BQ6NWY9 871 aaKnown RBP18.85■□□□□ 0.61
CDR2-204ENST00000564542 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
CDR2-204ENST00000564542 PRAMEF22A3QJZ6 481 aa18.84■□□□□ 0.61
CDR2-204ENST00000564542 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
CDR2-204ENST00000564542 CLEC4GQ6UXB4 293 aa18.84■□□□□ 0.61
CDR2-204ENST00000564542 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
CDR2-204ENST00000564542 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
CDR2-204ENST00000564542 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
CDR2-204ENST00000564542 LAMB4A4D0S4 1761 aa18.83■□□□□ 0.61
CDR2-204ENST00000564542 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.6
CDR2-204ENST00000564542 PIP4K2AP48426 406 aaPredicted RBP18.83■□□□□ 0.6
CDR2-204ENST00000564542 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDR2-204ENST00000564542 MCM10Q7L590 875 aa18.83■□□□□ 0.6
CDR2-204ENST00000564542 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.6
CDR2-204ENST00000564542 RGL2O15211 777 aa18.82■□□□□ 0.6
CDR2-204ENST00000564542 PPP2R1AP30153 589 aa18.82■□□□□ 0.6
CDR2-204ENST00000564542 COL13A1Q5TAT6 717 aaPredicted RBP18.81■□□□□ 0.6
CDR2-204ENST00000564542 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
CDR2-204ENST00000564542 NPR1P16066 1061 aa18.79■□□□□ 0.6
CDR2-204ENST00000564542 KLRG2A4D1S0 409 aaPredicted RBP18.78■□□□□ 0.6
CDR2-204ENST00000564542 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 CCDC93Q567U6 631 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 NBPF10Q6P3W6 841 aaKnown RBP18.78■□□□□ 0.6
CDR2-204ENST00000564542 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDR2-204ENST00000564542 SCN4AP35499 1836 aa18.78■□□□□ 0.6
CDR2-204ENST00000564542 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
CDR2-204ENST00000564542 TPTE2Q6XPS3 522 aa18.77■□□□□ 0.6
CDR2-204ENST00000564542 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
CDR2-204ENST00000564542 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
CDR2-204ENST00000564542 DLG5Q8TDM6 1919 aa18.75■□□□□ 0.59
CDR2-204ENST00000564542 HSPA1AP0DMV8 641 aaKnown RBP18.75■□□□□ 0.59
CDR2-204ENST00000564542 HSPA1BP0DMV9 641 aaKnown RBP18.75■□□□□ 0.59
CDR2-204ENST00000564542 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
CDR2-204ENST00000564542 L3MBTL3Q96JM7 780 aaPredicted RBP18.75■□□□□ 0.59
CDR2-204ENST00000564542 CREBZFQ9NS37 354 aa18.75■□□□□ 0.59
CDR2-204ENST00000564542 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
CDR2-204ENST00000564542 POTEJP0CG39 1038 aa18.74■□□□□ 0.59
CDR2-204ENST00000564542 FKBP4Q02790 459 aaKnown RBP eCLIP18.74■□□□□ 0.59
CDR2-204ENST00000564542 TNS4Q8IZW8 715 aa18.73■□□□□ 0.59
CDR2-204ENST00000564542 HLFQ16534 295 aa18.72■□□□□ 0.59
CDR2-204ENST00000564542 LDHDQ86WU2 507 aa18.72■□□□□ 0.59
CDR2-204ENST00000564542 RTKN2Q8IZC4 609 aa18.72■□□□□ 0.59
CDR2-204ENST00000564542 FAM177BA6PVY3 158 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 NEFMP07197 916 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 ALDH1B1P30837 517 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 PNISRQ8TF01 805 aaKnown RBP18.71■□□□□ 0.59
CDR2-204ENST00000564542 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
CDR2-204ENST00000564542 ZNF277Q9NRM2 450 aaPredicted RBP18.71■□□□□ 0.59
CDR2-204ENST00000564542 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 NUP98P52948 1817 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 PASKQ96RG2 1323 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 ZNF541Q9H0D2 1346 aa18.71■□□□□ 0.59
CDR2-204ENST00000564542 ADAMTSL1Q8N6G6 1762 aa18.7■□□□□ 0.58
CDR2-204ENST00000564542 GTF2E1P29083 439 aaPredicted RBP18.7■□□□□ 0.58
CDR2-204ENST00000564542 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
CDR2-204ENST00000564542 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
CDR2-204ENST00000564542 NYXQ9GZU5 481 aa18.7■□□□□ 0.58
CDR2-204ENST00000564542 ABCC12Q96J65 1359 aa18.69■□□□□ 0.58
CDR2-204ENST00000564542 RIC1Q4ADV7 1423 aa18.69■□□□□ 0.58
CDR2-204ENST00000564542 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
CDR2-204ENST00000564542 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
CDR2-204ENST00000564542 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
CDR2-204ENST00000564542 IARSP41252 1262 aaKnown RBP18.68■□□□□ 0.58
CDR2-204ENST00000564542 MKRN1Q9UHC7 482 aaKnown RBP18.68■□□□□ 0.58
CDR2-204ENST00000564542 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
CDR2-204ENST00000564542 CNTNAP1P78357 1384 aa18.68■□□□□ 0.58
CDR2-204ENST00000564542 KIF6Q6ZMV9 814 aa18.67■□□□□ 0.58
CDR2-204ENST00000564542 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
CDR2-204ENST00000564542 HACL1Q9UJ83 578 aa18.67■□□□□ 0.58
CDR2-204ENST00000564542 FZD9O00144 591 aa18.66■□□□□ 0.58
CDR2-204ENST00000564542 CAPN15O75808 1086 aa18.66■□□□□ 0.58
CDR2-204ENST00000564542 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
CDR2-204ENST00000564542 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
CDR2-204ENST00000564542 SYNE4Q8N205 404 aa18.66■□□□□ 0.58
CDR2-204ENST00000564542 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
CDR2-204ENST00000564542 PSMD1Q99460 953 aa18.66■□□□□ 0.58
CDR2-204ENST00000564542 EPHX2P34913 555 aa18.65■□□□□ 0.58
CDR2-204ENST00000564542 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
CDR2-204ENST00000564542 EAPPQ56P03 285 aaPredicted RBP18.65■□□□□ 0.58
CDR2-204ENST00000564542 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
CDR2-204ENST00000564542 GPC2Q8N158 579 aa18.65■□□□□ 0.58
CDR2-204ENST00000564542 UBN2Q6ZU65 1347 aa18.65■□□□□ 0.58
CDR2-204ENST00000564542 ITGBL1O95965 494 aaPredicted RBP18.64■□□□□ 0.57
CDR2-204ENST00000564542 TTLL7Q6ZT98 887 aa18.64■□□□□ 0.57
CDR2-204ENST00000564542 PNMA8AQ86V59 439 aaPredicted RBP18.64■□□□□ 0.57
CDR2-204ENST00000564542 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
CDR2-204ENST00000564542 RRP7AQ9Y3A4 280 aaKnown RBP18.64■□□□□ 0.57
CDR2-204ENST00000564542 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms