RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 RPAP2Q8IXW5 612 aaPredicted RBP11.1□□□□□ -0.63
TCF4-224ENST00000564403 RAI14Q9P0K7 980 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 RGPD5Q99666 1765 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 USP54Q70EL1 1684 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
TCF4-224ENST00000564403 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 USP44Q9H0E7 712 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
TCF4-224ENST00000564403 AMOTQ4VCS5 1084 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 LRRFIP2Q9Y608 721 aaKnown RBP11.09□□□□□ -0.63
TCF4-224ENST00000564403 BMP2KLQ5H9B9 411 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 SLIT3O75094 1523 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
TCF4-224ENST00000564403 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
TCF4-224ENST00000564403 GNAI2P04899 355 aa11.08□□□□□ -0.64
TCF4-224ENST00000564403 NBPF7P0C2Y1 421 aaPredicted RBP11.08□□□□□ -0.64
TCF4-224ENST00000564403 ZSCAN20P17040 1043 aaPredicted RBP11.08□□□□□ -0.64
TCF4-224ENST00000564403 SSR1P43307 286 aaKnown RBP11.08□□□□□ -0.64
TCF4-224ENST00000564403 GTPBP4Q9BZE4 634 aaKnown RBP11.08□□□□□ -0.64
TCF4-224ENST00000564403 NME8Q8N427 588 aa11.08□□□□□ -0.64
TCF4-224ENST00000564403 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
TCF4-224ENST00000564403 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
TCF4-224ENST00000564403 NOL8Q76FK4 1167 aaKnown RBP11.07□□□□□ -0.64
TCF4-224ENST00000564403 LRRC37A3O60309 1634 aa11.07□□□□□ -0.64
TCF4-224ENST00000564403 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
TCF4-224ENST00000564403 AIMP1Q12904 312 aaKnown RBP11.07□□□□□ -0.64
TCF4-224ENST00000564403 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■■■■ 130.4
TCF4-224ENST00000564403 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
TCF4-224ENST00000564403 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
TCF4-224ENST00000564403 ZBTB9Q96C00 473 aa11.06□□□□□ -0.64
TCF4-224ENST00000564403 TSPAN18Q96SJ8 248 aa11.06□□□□□ -0.64
TCF4-224ENST00000564403 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
TCF4-224ENST00000564403 CYP27B1O15528 508 aa11.06□□□□□ -0.64
TCF4-224ENST00000564403 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
TCF4-224ENST00000564403 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
TCF4-224ENST00000564403 BORCS6Q96GS4 357 aa11.05□□□□□ -0.64
TCF4-224ENST00000564403 FRAT2O75474 233 aaPredicted RBP11.05□□□□□ -0.64
TCF4-224ENST00000564403 UBTFL1P0CB47 393 aaPredicted RBP11.05□□□□□ -0.64
TCF4-224ENST00000564403 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
TCF4-224ENST00000564403 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
TCF4-224ENST00000564403 IL1RAPL2Q9NP60 686 aa11.05□□□□□ -0.64
TCF4-224ENST00000564403 MYL6BP14649 208 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 PHKG2P15735 406 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
TCF4-224ENST00000564403 ADRA2BP18089 450 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 SDSP20132 328 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 MTA1Q13330 715 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 TTC22Q5TAA0 569 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 SRCIN1Q9C0H9 1055 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 MEGF6O75095 1541 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 ATP8B2P98198 1209 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 APBB1IPQ7Z5R6 666 aaPredicted RBP11.04□□□□□ -0.64
TCF4-224ENST00000564403 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 MAP3K2Q9Y2U5 619 aa11.04□□□□□ -0.64
TCF4-224ENST00000564403 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 HMMRO75330 724 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 GNAI3P08754 354 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 BEND3Q5T5X7 828 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 ALS2Q96Q42 1657 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 SCP2P22307 547 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
TCF4-224ENST00000564403 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 ZNF496Q96IT1 587 aaPredicted RBP11.03□□□□□ -0.64
TCF4-224ENST00000564403 STRN4Q9NRL3 753 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
TCF4-224ENST00000564403 USP16Q9Y5T5 823 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 ADCY9O60503 1353 aa11.03□□□□□ -0.64
TCF4-224ENST00000564403 NRDCO43847 1150 aa11.02□□□□□ -0.64
TCF4-224ENST00000564403 CD2BP2O95400 341 aaKnown RBP11.02□□□□□ -0.64
TCF4-224ENST00000564403 BECN1Q14457 450 aa11.02□□□□□ -0.64
TCF4-224ENST00000564403 JARID2Q92833 1246 aaPredicted RBP11.02□□□□□ -0.64
TCF4-224ENST00000564403 KIF2CQ99661 725 aa11.02□□□□□ -0.64
TCF4-224ENST00000564403 SLC52A2Q9HAB3 445 aa11.02□□□□□ -0.64
TCF4-224ENST00000564403 KDM6AO15550 1401 aaPredicted RBP11.02□□□□□ -0.64
TCF4-224ENST00000564403 NCAPD2Q15021 1401 aa11.02□□□□□ -0.64
TCF4-224ENST00000564403 PHRF1Q9P1Y6 1649 aaKnown RBP11.02□□□□□ -0.65
TCF4-224ENST00000564403 GOLGA6CA6NDK9 693 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 GOLGA6BA6NDN3 693 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 GOLGA6DP0CG33 693 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
TCF4-224ENST00000564403 GOLGA6AQ9NYA3 693 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.65
TCF4-224ENST00000564403 SRGAP3O43295 1099 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 DHX16O60231 1041 aaKnown RBP11.02□□□□□ -0.65
TCF4-224ENST00000564403 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.65
TCF4-224ENST00000564403 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
TCF4-224ENST00000564403 PDIA6Q15084 440 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms