RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 LGR6Q9HBX8 967 aa21.8■■□□□ 1.08
RNF40-205ENST00000563909 SLX4Q8IY92 1834 aa21.8■■□□□ 1.08
RNF40-205ENST00000563909 A0A087WZG4 1122 aa21.79■■□□□ 1.08
RNF40-205ENST00000563909 ECE1P42892 770 aa21.79■■□□□ 1.08
RNF40-205ENST00000563909 DDX21Q9NR30 783 aaKnown RBP eCLIP21.79■■□□□ 1.08
RNF40-205ENST00000563909 NPHP1O15259 732 aa21.78■■□□□ 1.08
RNF40-205ENST00000563909 SRGNP10124 158 aa21.78■■□□□ 1.08
RNF40-205ENST00000563909 EIF5P55010 431 aaKnown RBP21.78■■□□□ 1.08
RNF40-205ENST00000563909 SULT6B1Q6IMI4 303 aa21.78■■□□□ 1.08
RNF40-205ENST00000563909 MCOLN1Q9GZU1 580 aa21.78■■□□□ 1.08
RNF40-205ENST00000563909 ADAMTSL1Q8N6G6 1762 aa21.78■■□□□ 1.08
RNF40-205ENST00000563909 RNF123Q5XPI4 1314 aa21.78■■□□□ 1.08
RNF40-205ENST00000563909 SCN11AQ9UI33 1791 aa21.77■■□□□ 1.08
RNF40-205ENST00000563909 CYP4F22Q6NT55 531 aa21.77■■□□□ 1.08
RNF40-205ENST00000563909 VSIG10Q8N0Z9 540 aa21.77■■□□□ 1.08
RNF40-205ENST00000563909 MASTLQ96GX5 879 aa21.77■■□□□ 1.08
RNF40-205ENST00000563909 ZNF277Q9NRM2 450 aaPredicted RBP21.77■■□□□ 1.08
RNF40-205ENST00000563909 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
RNF40-205ENST00000563909 CNBD1Q8NA66 436 aa21.76■■□□□ 1.07
RNF40-205ENST00000563909 STARD3NLO95772 234 aa21.75■■□□□ 1.07
RNF40-205ENST00000563909 CCDC93Q567U6 631 aa21.75■■□□□ 1.07
RNF40-205ENST00000563909 C7orf43Q8WVR3 580 aa21.75■■□□□ 1.07
RNF40-205ENST00000563909 TBC1D2BQ9UPU7 963 aa21.75■■□□□ 1.07
RNF40-205ENST00000563909 ST5P78524 1137 aa21.74■■□□□ 1.07
RNF40-205ENST00000563909 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
RNF40-205ENST00000563909 ZNF330Q9Y3S2 320 aaPredicted RBP21.74■■□□□ 1.07
RNF40-205ENST00000563909 THSD7BQ9C0I4 1608 aa21.73■■□□□ 1.07
RNF40-205ENST00000563909 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
RNF40-205ENST00000563909 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
RNF40-205ENST00000563909 FMR1Q06787 632 aaKnown RBP eCLIP21.73■■□□□ 1.072e-6■■■■□ 22.7
RNF40-205ENST00000563909 PDE4DIPQ5VU43 2346 aa21.73■■□□□ 1.07
RNF40-205ENST00000563909 RNMTO43148 476 aaKnown RBP21.72■■□□□ 1.07
RNF40-205ENST00000563909 AOC2O75106 756 aa21.71■■□□□ 1.07
RNF40-205ENST00000563909 GPC2Q8N158 579 aa21.71■■□□□ 1.07
RNF40-205ENST00000563909 FZD9O00144 591 aa21.7■■□□□ 1.06
RNF40-205ENST00000563909 MAP2K2P36507 400 aa21.7■■□□□ 1.06
RNF40-205ENST00000563909 DGKZQ13574 1117 aa21.7■■□□□ 1.06
RNF40-205ENST00000563909 OLFM4Q6UX06 510 aa21.7■■□□□ 1.06
RNF40-205ENST00000563909 CST9Q5W186 159 aa21.69■■□□□ 1.06
RNF40-205ENST00000563909 CA12O43570 354 aa21.68■■□□□ 1.06
RNF40-205ENST00000563909 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
RNF40-205ENST00000563909 MRC1P22897 1456 aa21.68■■□□□ 1.06
RNF40-205ENST00000563909 ARFGEF2Q9Y6D5 1785 aa21.68■■□□□ 1.06
RNF40-205ENST00000563909 TRAF5O00463 557 aa21.67■■□□□ 1.06
RNF40-205ENST00000563909 NPR1P16066 1061 aa21.67■■□□□ 1.06
RNF40-205ENST00000563909 IARSP41252 1262 aaKnown RBP21.67■■□□□ 1.06
RNF40-205ENST00000563909 GJA3Q9Y6H8 435 aa21.67■■□□□ 1.06
RNF40-205ENST00000563909 TLL2Q9Y6L7 1015 aa21.67■■□□□ 1.06
RNF40-205ENST00000563909 LTBP1Q14766 1721 aa21.66■■□□□ 1.06
RNF40-205ENST00000563909 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
RNF40-205ENST00000563909 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
RNF40-205ENST00000563909 SYNE4Q8N205 404 aa21.66■■□□□ 1.06
RNF40-205ENST00000563909 LMOD1P29536 600 aaPredicted RBP21.65■■□□□ 1.06
RNF40-205ENST00000563909 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
RNF40-205ENST00000563909 NPM2Q86SE8 214 aaKnown RBP21.65■■□□□ 1.06
RNF40-205ENST00000563909 POLR3GLQ9BT43 218 aa21.65■■□□□ 1.06
RNF40-205ENST00000563909 CAMTA2O94983 1202 aa21.64■■□□□ 1.05
RNF40-205ENST00000563909 IL13P35225 146 aa21.64■■□□□ 1.05
RNF40-205ENST00000563909 NBPF5PQ86XG9 351 aaPredicted RBP21.64■■□□□ 1.05
RNF40-205ENST00000563909 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
RNF40-205ENST00000563909 CASP8AP2Q9UKL3 1982 aa21.64■■□□□ 1.05
RNF40-205ENST00000563909 TEX13AQ9BXU3 409 aaPredicted RBP21.63■■□□□ 1.05
RNF40-205ENST00000563909 EPS15P42566 896 aa21.62■■□□□ 1.05
RNF40-205ENST00000563909 ZNF496Q96IT1 587 aaPredicted RBP21.62■■□□□ 1.05
RNF40-205ENST00000563909 A1BGP04217 495 aa21.61■■□□□ 1.05
RNF40-205ENST00000563909 BRPF1P55201 1214 aaPredicted RBP21.61■■□□□ 1.05
RNF40-205ENST00000563909 EIF6P56537 245 aaKnown RBP21.61■■□□□ 1.05
RNF40-205ENST00000563909 UBR2Q8IWV8 1755 aa21.61■■□□□ 1.05
RNF40-205ENST00000563909 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
RNF40-205ENST00000563909 SOX10P56693 466 aa21.6■■□□□ 1.05
RNF40-205ENST00000563909 USP50Q70EL3 339 aaPredicted RBP21.6■■□□□ 1.05
RNF40-205ENST00000563909 SAPCD2Q86UD0 394 aa21.6■■□□□ 1.05
RNF40-205ENST00000563909 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
RNF40-205ENST00000563909 SCNN1DP51172 638 aa21.59■■□□□ 1.05
RNF40-205ENST00000563909 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
RNF40-205ENST00000563909 DZIP3Q86Y13 1208 aaKnown RBP21.59■■□□□ 1.05
RNF40-205ENST00000563909 HEG1Q9ULI3 1381 aa21.59■■□□□ 1.05
RNF40-205ENST00000563909 HMOX1P09601 288 aa21.58■■□□□ 1.05
RNF40-205ENST00000563909 PRPF38BQ5VTL8 546 aaKnown RBP21.58■■□□□ 1.05
RNF40-205ENST00000563909 CIAPIN1Q6FI81 312 aa21.58■■□□□ 1.05
RNF40-205ENST00000563909 TRPM7Q96QT4 1865 aa21.58■■□□□ 1.04
RNF40-205ENST00000563909 CELF2O95319 508 aaKnown RBP21.57■■□□□ 1.04
RNF40-205ENST00000563909 ALDH1B1P30837 517 aa21.57■■□□□ 1.04
RNF40-205ENST00000563909 ZNF790Q6PG37 636 aa21.57■■□□□ 1.04
RNF40-205ENST00000563909 PSMD1Q99460 953 aa21.57■■□□□ 1.04
RNF40-205ENST00000563909 TPTE2Q6XPS3 522 aa21.56■■□□□ 1.04
RNF40-205ENST00000563909 HHIPL1Q96JK4 782 aa21.55■■□□□ 1.04
RNF40-205ENST00000563909 PANK3Q9H999 370 aa21.55■■□□□ 1.04
RNF40-205ENST00000563909 CLEC4GQ6UXB4 293 aa21.54■■□□□ 1.04
RNF40-205ENST00000563909 COL4A5P29400 1685 aa21.53■■□□□ 1.04
RNF40-205ENST00000563909 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
RNF40-205ENST00000563909 TEFQ10587 303 aa21.53■■□□□ 1.04
RNF40-205ENST00000563909 ZNF652Q9Y2D9 606 aa21.53■■□□□ 1.04
RNF40-205ENST00000563909 PIP4K2AP48426 406 aaPredicted RBP21.52■■□□□ 1.04
RNF40-205ENST00000563909 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
RNF40-205ENST00000563909 FMNL2Q96PY5 1086 aa21.52■■□□□ 1.04
RNF40-205ENST00000563909 ZIC5Q96T25 663 aa21.51■■□□□ 1.03
RNF40-205ENST00000563909 GLIS2Q9BZE0 524 aaPredicted RBP21.51■■□□□ 1.03
RNF40-205ENST00000563909 ZNF408Q9H9D4 720 aa21.51■■□□□ 1.03
RNF40-205ENST00000563909 ADARB2Q9NS39 739 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms