RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-206ENST00000563900 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
NSMCE1-206ENST00000563900 AFDNP55196 1824 aaKnown RBP11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 MAP3K15Q6ZN16 1313 aa11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 ERVV-1B6SEH8 477 aa11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 ANXA1P04083 346 aa11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 MYL6BP14649 208 aa11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 CD2APQ9Y5K6 639 aa11.42□□□□□ -0.58
NSMCE1-206ENST00000563900 ELL2O00472 640 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 HLFQ16534 295 aa11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 TRMT2AQ8IZ69 625 aaKnown RBP11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 MYH16Q9H6N6 1097 aa11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 DBF4Q9UBU7 674 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 NUP98P52948 1817 aa11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
NSMCE1-206ENST00000563900 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 E9PSI1 815 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 VAMP4O75379 141 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 SLFN5Q08AF3 891 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 NLGN2Q8NFZ4 835 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.58
NSMCE1-206ENST00000563900 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 CCDC30Q5VVM6 783 aa11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 GIGYF2Q6Y7W6 1299 aaKnown RBP11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 COPS6Q7L5N1 327 aa11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 XAGE3Q8WTP9 111 aa11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 CHMP4AQ9BY43 222 aa11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 HYPKQ9NX55 129 aa11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 ZNF652Q9Y2D9 606 aa11.39□□□□□ -0.59
NSMCE1-206ENST00000563900 SERPINB2P05120 415 aa11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 ZBTB3Q9H5J0 574 aa11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 GOLGB1Q14789 3259 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 IBTKQ9P2D0 1353 aaPredicted RBP11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 ANKRD31Q8N7Z5 1873 aa11.38□□□□□ -0.59
NSMCE1-206ENST00000563900 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 ANKRD36CQ5JPF3 1778 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 TGFB2P61812 414 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 PRR5LQ6MZQ0 368 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 BICDL1Q6ZP65 573 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 ZNF34Q8IZ26 560 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 SETDB2Q96T68 719 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 BRCA1P38398 1863 aaKnown RBP11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 UTRNP46939 3433 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
NSMCE1-206ENST00000563900 ARFGEF2Q9Y6D5 1785 aa11.36□□□□□ -0.59
NSMCE1-206ENST00000563900 PLBD2Q8NHP8 589 aa11.36□□□□□ -0.59
NSMCE1-206ENST00000563900 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
NSMCE1-206ENST00000563900 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
NSMCE1-206ENST00000563900 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 KCNA3P22001 575 aa11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
NSMCE1-206ENST00000563900 ADCY9O60503 1353 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 NTSR2O95665 410 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 HNRNPUQ00839 825 aaKnown RBP eCLIP11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 TCIRG1Q13488 830 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 G2E3Q7L622 706 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 CNBD1Q8NA66 436 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 ISCA1Q9BUE6 129 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 BRIP1Q9BX63 1249 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
NSMCE1-206ENST00000563900 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 DPEP1P16444 411 aa11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 GPTP24298 496 aa11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 RNF123Q5XPI4 1314 aa11.33□□□□□ -0.6
NSMCE1-206ENST00000563900 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 FLIIQ13045 1269 aa11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 MAPK8IP2Q13387 824 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 TPTE2Q6XPS3 522 aa11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 ZNF428Q96B54 188 aa11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
NSMCE1-206ENST00000563900 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 CHRNA5P30532 468 aa11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 ST5P78524 1137 aa11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms