RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 NFKBIEO00221 500 aa23.02■■□□□ 1.28
MAP1LC3B-204ENST00000563720 THUMPD2Q9BTF0 503 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3B-204ENST00000563720 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
MAP1LC3B-204ENST00000563720 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
MAP1LC3B-204ENST00000563720 PIP4K2AP48426 406 aaPredicted RBP23■■□□□ 1.27
MAP1LC3B-204ENST00000563720 ZNF622Q969S3 477 aaKnown RBP eCLIP23■■□□□ 1.27
MAP1LC3B-204ENST00000563720 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
MAP1LC3B-204ENST00000563720 TBC1D9BQ66K14 1250 aa22.99■■□□□ 1.27
MAP1LC3B-204ENST00000563720 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
MAP1LC3B-204ENST00000563720 ZNF219Q9P2Y4 722 aaPredicted RBP22.99■■□□□ 1.27
MAP1LC3B-204ENST00000563720 POTECB2RU33 542 aa22.98■■□□□ 1.27
MAP1LC3B-204ENST00000563720 CAMTA2O94983 1202 aa22.98■■□□□ 1.27
MAP1LC3B-204ENST00000563720 ERFEQ4G0M1 354 aa22.98■■□□□ 1.27
MAP1LC3B-204ENST00000563720 NBPF26B4DH59 902 aa22.97■■□□□ 1.27
MAP1LC3B-204ENST00000563720 C21orf2O43822 256 aa22.97■■□□□ 1.27
MAP1LC3B-204ENST00000563720 NBPF10Q6P3W6 841 aaKnown RBP22.97■■□□□ 1.27
MAP1LC3B-204ENST00000563720 NBPF15Q8N660 670 aa22.97■■□□□ 1.27
MAP1LC3B-204ENST00000563720 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3B-204ENST00000563720 PDZRN3Q9UPQ7 1066 aa22.97■■□□□ 1.27
MAP1LC3B-204ENST00000563720 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
MAP1LC3B-204ENST00000563720 PDE6BP35913 854 aa22.96■■□□□ 1.27
MAP1LC3B-204ENST00000563720 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3B-204ENST00000563720 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3B-204ENST00000563720 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
MAP1LC3B-204ENST00000563720 PCNTO95613 3336 aa22.95■■□□□ 1.27
MAP1LC3B-204ENST00000563720 TMPOP42166 694 aaKnown RBP22.95■■□□□ 1.26
MAP1LC3B-204ENST00000563720 RIPK4P57078 832 aa22.95■■□□□ 1.26
MAP1LC3B-204ENST00000563720 NUP98P52948 1817 aa22.94■■□□□ 1.26
MAP1LC3B-204ENST00000563720 ZEB1P37275 1124 aaPredicted RBP22.94■■□□□ 1.26
MAP1LC3B-204ENST00000563720 EIF4A1P60842 406 aaKnown RBP22.94■■□□□ 1.26
MAP1LC3B-204ENST00000563720 BRIP1Q9BX63 1249 aa22.94■■□□□ 1.26
MAP1LC3B-204ENST00000563720 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
MAP1LC3B-204ENST00000563720 CCDC24Q8N4L8 307 aa22.93■■□□□ 1.26
MAP1LC3B-204ENST00000563720 CACNA1SQ13698 1873 aa22.92■■□□□ 1.26
MAP1LC3B-204ENST00000563720 NPHP1O15259 732 aa22.92■■□□□ 1.26
MAP1LC3B-204ENST00000563720 CHADLQ6NUI6 762 aa22.92■■□□□ 1.26
MAP1LC3B-204ENST00000563720 CREBZFQ9NS37 354 aa22.92■■□□□ 1.26
MAP1LC3B-204ENST00000563720 MKRN1Q9UHC7 482 aaKnown RBP22.92■■□□□ 1.26
MAP1LC3B-204ENST00000563720 PRR5LQ6MZQ0 368 aa22.91■■□□□ 1.26
MAP1LC3B-204ENST00000563720 TAOK3Q9H2K8 898 aa22.91■■□□□ 1.26
MAP1LC3B-204ENST00000563720 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
MAP1LC3B-204ENST00000563720 RUNDC1Q96C34 613 aa22.9■■□□□ 1.26
MAP1LC3B-204ENST00000563720 SETDB2Q96T68 719 aa22.9■■□□□ 1.26
MAP1LC3B-204ENST00000563720 ADAMTS8Q9UP79 889 aa22.9■■□□□ 1.26
MAP1LC3B-204ENST00000563720 RRP7AQ9Y3A4 280 aaKnown RBP22.9■■□□□ 1.26
MAP1LC3B-204ENST00000563720 LTBP3Q9NS15 1303 aa22.89■■□□□ 1.26
MAP1LC3B-204ENST00000563720 DDNO94850 711 aaPredicted RBP22.89■■□□□ 1.25
MAP1LC3B-204ENST00000563720 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.25
MAP1LC3B-204ENST00000563720 CLEC4GQ6UXB4 293 aa22.89■■□□□ 1.25
MAP1LC3B-204ENST00000563720 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.25
MAP1LC3B-204ENST00000563720 CNKSR1Q969H4 720 aa22.88■■□□□ 1.25
MAP1LC3B-204ENST00000563720 TSPYL4Q9UJ04 414 aa22.88■■□□□ 1.25
MAP1LC3B-204ENST00000563720 RGL2O15211 777 aa22.87■■□□□ 1.25
MAP1LC3B-204ENST00000563720 POTEIP0CG38 1075 aa22.87■■□□□ 1.25
MAP1LC3B-204ENST00000563720 POTEJP0CG39 1038 aa22.87■■□□□ 1.25
MAP1LC3B-204ENST00000563720 CNBD1Q8NA66 436 aa22.87■■□□□ 1.25
MAP1LC3B-204ENST00000563720 ST5P78524 1137 aa22.86■■□□□ 1.25
MAP1LC3B-204ENST00000563720 NEUROD2Q15784 382 aa22.86■■□□□ 1.25
MAP1LC3B-204ENST00000563720 SOGA3Q5TF21 947 aa22.86■■□□□ 1.25
MAP1LC3B-204ENST00000563720 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
MAP1LC3B-204ENST00000563720 ZNF652Q9Y2D9 606 aa22.86■■□□□ 1.25
MAP1LC3B-204ENST00000563720 FER1L6Q2WGJ9 1857 aa22.85■■□□□ 1.25
MAP1LC3B-204ENST00000563720 DICER1Q9UPY3 1922 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-204ENST00000563720 STYK1Q6J9G0 422 aa22.85■■□□□ 1.25
MAP1LC3B-204ENST00000563720 PRPF40BQ6NWY9 871 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-204ENST00000563720 TRIM35Q9UPQ4 493 aa22.85■■□□□ 1.25
MAP1LC3B-204ENST00000563720 IQCA1LA6NCM1 817 aa22.84■■□□□ 1.25
MAP1LC3B-204ENST00000563720 HLFQ16534 295 aa22.84■■□□□ 1.25
MAP1LC3B-204ENST00000563720 SLX4Q8IY92 1834 aa22.84■■□□□ 1.25
MAP1LC3B-204ENST00000563720 SRGNP10124 158 aa22.83■■□□□ 1.25
MAP1LC3B-204ENST00000563720 MASTLQ96GX5 879 aa22.83■■□□□ 1.25
MAP1LC3B-204ENST00000563720 CNTNAP1P78357 1384 aa22.82■■□□□ 1.24
MAP1LC3B-204ENST00000563720 FOXN1O15353 648 aa22.82■■□□□ 1.24
MAP1LC3B-204ENST00000563720 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
MAP1LC3B-204ENST00000563720 NIP7Q9Y221 180 aaKnown RBP eCLIP22.82■■□□□ 1.24
MAP1LC3B-204ENST00000563720 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
MAP1LC3B-204ENST00000563720 MYL6BP14649 208 aa22.81■■□□□ 1.24
MAP1LC3B-204ENST00000563720 LDHDQ86WU2 507 aa22.81■■□□□ 1.24
MAP1LC3B-204ENST00000563720 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
MAP1LC3B-204ENST00000563720 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
MAP1LC3B-204ENST00000563720 CHL1O00533 1208 aa22.8■■□□□ 1.24
MAP1LC3B-204ENST00000563720 TTLL7Q6ZT98 887 aa22.8■■□□□ 1.24
MAP1LC3B-204ENST00000563720 AIDAQ96BJ3 306 aa22.8■■□□□ 1.24
MAP1LC3B-204ENST00000563720 MAP3K15Q6ZN16 1313 aa22.8■■□□□ 1.24
MAP1LC3B-204ENST00000563720 ANKRD36CQ5JPF3 1778 aa22.79■■□□□ 1.24
MAP1LC3B-204ENST00000563720 TAF1DQ9H5J8 278 aaPredicted RBP22.79■■□□□ 1.24
MAP1LC3B-204ENST00000563720 PASKQ96RG2 1323 aa22.79■■□□□ 1.24
MAP1LC3B-204ENST00000563720 PDIA6Q15084 440 aa22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 CCDC93Q567U6 631 aa22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 EAPPQ56P03 285 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 KIF6Q6ZMV9 814 aa22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 LRP10Q7Z4F1 713 aa22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 PRDM10Q9NQV6 1147 aa22.78■■□□□ 1.24
MAP1LC3B-204ENST00000563720 TMEM88BA6NKF7 163 aa22.77■■□□□ 1.24
MAP1LC3B-204ENST00000563720 EIF2S2P20042 333 aaKnown RBP22.77■■□□□ 1.24
MAP1LC3B-204ENST00000563720 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
MAP1LC3B-204ENST00000563720 CTCFP49711 727 aaPredicted RBP22.76■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ZNF316A6NFI3 1004 aaPredicted RBP22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 FAM177BA6PVY3 158 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms