RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 STRCQ7RTU9 1775 aa12.07□□□□□ -0.48
PDXDC1-210ENST00000563679 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
PDXDC1-210ENST00000563679 XRCC6P12956 609 aaKnown RBP eCLIP12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 MRE11P49959 708 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 LARP1Q6PKG0 1096 aaKnown RBP12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 CNTROBQ8N137 903 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 RILPL2Q969X0 211 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 IL25Q9H293 177 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 SNRKQ9NRH2 765 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 IGKV5-2P06315 115 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 KCNB2Q92953 911 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 LSG1Q9H089 658 aaKnown RBP12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 SUCLG2Q96I99 432 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 NLRP2Q9NX02 1062 aa12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-210ENST00000563679 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 CYP27B1O15528 508 aa12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 ANO2Q9NQ90 1003 aa12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 NEK4P51957 841 aa12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 ECHDC1Q9NTX5 307 aa12.05□□□□□ -0.48
PDXDC1-210ENST00000563679 TJP1Q07157 1748 aa12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 NEURL1BA8MQ27 555 aa12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
PDXDC1-210ENST00000563679 NFATC2IPQ8NCF5 419 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 GCKRQ14397 625 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 TTC14Q96N46 770 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 BICC1Q9H694 974 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 SOS2Q07890 1332 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 JCADQ9P266 1359 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 TNS2Q63HR2 1409 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 COL5A2P05997 1499 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 SASH1O94885 1247 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 BRD1O95696 1058 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 RABL6Q3YEC7 729 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 DDX17Q92841 729 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
PDXDC1-210ENST00000563679 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 PKP1Q13835 747 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 PKNOX2Q96KN3 472 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 WDR17Q8IZU2 1322 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 BRINP3Q76B58 766 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 EVI5LQ96CN4 794 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 GZF1Q9H116 711 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
PDXDC1-210ENST00000563679 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 RFX5P48382 616 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 ZNF445P59923 1031 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 NEXNQ0ZGT2 675 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 TOGARAM1Q9Y4F4 1720 aa12.01□□□□□ -0.49
PDXDC1-210ENST00000563679 OS9Q13438 667 aaPredicted RBP12□□□□□ -0.49
PDXDC1-210ENST00000563679 TM6SF1Q9BZW5 370 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
PDXDC1-210ENST00000563679 PCDH11XQ9BZA7 1347 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 PCDH11YQ9BZA8 1340 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 HIP1O00291 1037 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 CASP7P55210 303 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 COPS6Q7L5N1 327 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
PDXDC1-210ENST00000563679 IFIT2P09913 472 aaKnown RBP12□□□□□ -0.49
PDXDC1-210ENST00000563679 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
PDXDC1-210ENST00000563679 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 GAS2L3Q86XJ1 694 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.491e-7■■□□□ 13.3
PDXDC1-210ENST00000563679 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 AACSQ86V21 672 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 PLBD2Q8NHP8 589 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
PDXDC1-210ENST00000563679 MAP4K4O95819 1239 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 MCTP1Q6DN14 999 aa11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms