RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 NBPF26B4DH59 902 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 PHF14O94880 888 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 CYP19A1P11511 503 aaPredicted RBP19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 NBPF10Q6P3W6 841 aaKnown RBP19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 COPS6Q7L5N1 327 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 COL23A1Q86Y22 540 aaPredicted RBP19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 NBPF15Q8N660 670 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 LINC00116Q8NCU8 138 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 FLAD1Q8NFF5 587 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 DDX19BQ9UMR2 479 aa19.58■□□□□ 0.72
PDXDC1-209ENST00000563667 ITPK1Q13572 414 aa19.57■□□□□ 0.72
PDXDC1-209ENST00000563667 ARXQ96QS3 562 aa19.57■□□□□ 0.72
PDXDC1-209ENST00000563667 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
PDXDC1-209ENST00000563667 PI4KAP2A4QPH2 592 aa19.56■□□□□ 0.72
PDXDC1-209ENST00000563667 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
PDXDC1-209ENST00000563667 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
PDXDC1-209ENST00000563667 PI4KAP1Q8N8J0 262 aa19.56■□□□□ 0.72
PDXDC1-209ENST00000563667 CCT4P50991 539 aaKnown RBP19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 TJP1Q07157 1748 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 KSR2Q6VAB6 950 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 RIC3Q7Z5B4 369 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 DNAAF4Q8WXU2 420 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 SGIP1Q9BQI5 828 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 MAP3K2Q9Y2U5 619 aa19.55■□□□□ 0.72
PDXDC1-209ENST00000563667 C4BP0C0L5 1744 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 QSER1Q2KHR3 1735 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 GNPATO15228 680 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 LRP10Q7Z4F1 713 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 FHDC1Q9C0D6 1143 aaPredicted RBP19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 CHMP4BQ9H444 224 aaKnown RBP19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 CCDC87Q9NVE4 849 aa19.54■□□□□ 0.72
PDXDC1-209ENST00000563667 CRKLP46109 303 aaKnown RBP19.53■□□□□ 0.72
PDXDC1-209ENST00000563667 ANKRD13DQ6ZTN6 518 aa19.53■□□□□ 0.72
PDXDC1-209ENST00000563667 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
PDXDC1-209ENST00000563667 ZBTB1Q9Y2K1 713 aa19.53■□□□□ 0.72
PDXDC1-209ENST00000563667 ADCY9O60503 1353 aa19.53■□□□□ 0.72
PDXDC1-209ENST00000563667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.52■□□□□ 0.72
PDXDC1-209ENST00000563667 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
PDXDC1-209ENST00000563667 SMIM5Q71RC9 77 aa19.52■□□□□ 0.72
PDXDC1-209ENST00000563667 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.72
PDXDC1-209ENST00000563667 SSFA2P28290 1259 aa19.51■□□□□ 0.71
PDXDC1-209ENST00000563667 AAMPQ13685 434 aa19.51■□□□□ 0.71
PDXDC1-209ENST00000563667 TTLL7Q6ZT98 887 aa19.51■□□□□ 0.71
PDXDC1-209ENST00000563667 TAF1LQ8IZX4 1826 aa19.51■□□□□ 0.71
PDXDC1-209ENST00000563667 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 KIF6Q6ZMV9 814 aa19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 AMIGO3Q86WK7 504 aa19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 PLBD2Q8NHP8 589 aa19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 SYT17Q9BSW7 474 aa19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
PDXDC1-209ENST00000563667 PXDNLA1KZ92 1463 aa19.49■□□□□ 0.71
PDXDC1-209ENST00000563667 IL6STP40189 918 aaPredicted RBP19.49■□□□□ 0.71
PDXDC1-209ENST00000563667 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
PDXDC1-209ENST00000563667 RTCBQ9Y3I0 505 aaKnown RBP19.49■□□□□ 0.71
PDXDC1-209ENST00000563667 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
PDXDC1-209ENST00000563667 MYD88Q99836 296 aa19.48■□□□□ 0.71
PDXDC1-209ENST00000563667 ZBTB3Q9H5J0 574 aa19.48■□□□□ 0.71
PDXDC1-209ENST00000563667 ZBTB40Q9NUA8 1239 aa19.48■□□□□ 0.71
PDXDC1-209ENST00000563667 CICQ96RK0 1608 aaPredicted RBP19.47■□□□□ 0.71
PDXDC1-209ENST00000563667 ZNF831Q5JPB2 1677 aa19.47■□□□□ 0.71
PDXDC1-209ENST00000563667 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
PDXDC1-209ENST00000563667 METTL22Q9BUU2 404 aaPredicted RBP19.47■□□□□ 0.71
PDXDC1-209ENST00000563667 CNTNAP4Q9C0A0 1308 aa19.47■□□□□ 0.71
PDXDC1-209ENST00000563667 RC3H1Q5TC82 1133 aaKnown RBP19.46■□□□□ 0.71
PDXDC1-209ENST00000563667 ATP10DQ9P241 1426 aa19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 ALDH1L1O75891 902 aa19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 DZIP3Q86Y13 1208 aaKnown RBP19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 LINS1Q8NG48 757 aa19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 MEIS3Q99687 375 aa19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 TBC1D2BQ9UPU7 963 aa19.45■□□□□ 0.7
PDXDC1-209ENST00000563667 RPS6KA4O75676 772 aa19.44■□□□□ 0.7
PDXDC1-209ENST00000563667 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
PDXDC1-209ENST00000563667 C1orf115Q9H7X2 142 aa19.44■□□□□ 0.7
PDXDC1-209ENST00000563667 MAP3K15Q6ZN16 1313 aa19.44■□□□□ 0.7
PDXDC1-209ENST00000563667 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
PDXDC1-209ENST00000563667 ATP5J2-PTCD1G3V325 749 aa19.43■□□□□ 0.7
PDXDC1-209ENST00000563667 GNAI3P08754 354 aa19.43■□□□□ 0.7
PDXDC1-209ENST00000563667 RFC4P35249 363 aa19.43■□□□□ 0.7
PDXDC1-209ENST00000563667 PCDHB15Q9Y5E8 787 aa19.43■□□□□ 0.7
PDXDC1-209ENST00000563667 UBR3Q6ZT12 1888 aa19.42■□□□□ 0.7
PDXDC1-209ENST00000563667 A0A087WZG4 1122 aa19.42■□□□□ 0.7
PDXDC1-209ENST00000563667 ADRA2BP18089 450 aa19.42■□□□□ 0.7
PDXDC1-209ENST00000563667 ARHGEF1Q92888 912 aaKnown RBP19.42■□□□□ 0.7
PDXDC1-209ENST00000563667 C9orf78Q9NZ63 289 aaPredicted RBP19.42■□□□□ 0.7
PDXDC1-209ENST00000563667 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
PDXDC1-209ENST00000563667 IGKV5-2P06315 115 aa19.41■□□□□ 0.7
PDXDC1-209ENST00000563667 UBTFL1P0CB47 393 aaPredicted RBP19.41■□□□□ 0.7
PDXDC1-209ENST00000563667 PELP1Q8IZL8 1130 aaKnown RBP19.41■□□□□ 0.7
PDXDC1-209ENST00000563667 USP44Q9H0E7 712 aa19.41■□□□□ 0.7
PDXDC1-209ENST00000563667 COL15A1P39059 1388 aa19.41■□□□□ 0.7
PDXDC1-209ENST00000563667 ARFGEF2Q9Y6D5 1785 aa19.4■□□□□ 0.7
PDXDC1-209ENST00000563667 GNAI2P04899 355 aa19.4■□□□□ 0.7
PDXDC1-209ENST00000563667 TCIRG1Q13488 830 aa19.4■□□□□ 0.7
PDXDC1-209ENST00000563667 N4BP2Q86UW6 1770 aaPredicted RBP19.39■□□□□ 0.7
PDXDC1-209ENST00000563667 ERVV-1B6SEH8 477 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms