RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 PRAMEF22A3QJZ6 481 aa13.16□□□□□ -0.3
VAC14-204ENST00000563662 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
VAC14-204ENST00000563662 CHRNA5P30532 468 aa13.16□□□□□ -0.3
VAC14-204ENST00000563662 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
VAC14-204ENST00000563662 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
VAC14-204ENST00000563662 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
VAC14-204ENST00000563662 NBPF5PQ86XG9 351 aaPredicted RBP13.16□□□□□ -0.3
VAC14-204ENST00000563662 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
VAC14-204ENST00000563662 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
VAC14-204ENST00000563662 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
VAC14-204ENST00000563662 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
VAC14-204ENST00000563662 GTF2E1P29083 439 aaPredicted RBP13.15□□□□□ -0.3
VAC14-204ENST00000563662 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
VAC14-204ENST00000563662 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
VAC14-204ENST00000563662 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
VAC14-204ENST00000563662 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
VAC14-204ENST00000563662 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
VAC14-204ENST00000563662 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
VAC14-204ENST00000563662 TJP1Q07157 1748 aa13.14□□□□□ -0.31
VAC14-204ENST00000563662 PRR5LQ6MZQ0 368 aa13.14□□□□□ -0.31
VAC14-204ENST00000563662 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
VAC14-204ENST00000563662 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
VAC14-204ENST00000563662 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
VAC14-204ENST00000563662 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
VAC14-204ENST00000563662 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
VAC14-204ENST00000563662 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
VAC14-204ENST00000563662 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
VAC14-204ENST00000563662 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
VAC14-204ENST00000563662 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
VAC14-204ENST00000563662 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
VAC14-204ENST00000563662 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
VAC14-204ENST00000563662 CHL1O00533 1208 aa13.12□□□□□ -0.31
VAC14-204ENST00000563662 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
VAC14-204ENST00000563662 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
VAC14-204ENST00000563662 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
VAC14-204ENST00000563662 MASTLQ96GX5 879 aa13.12□□□□□ -0.31
VAC14-204ENST00000563662 MYL6BP14649 208 aa13.11□□□□□ -0.31
VAC14-204ENST00000563662 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
VAC14-204ENST00000563662 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
VAC14-204ENST00000563662 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
VAC14-204ENST00000563662 ADCY9O60503 1353 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 ANP32CO43423 234 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 SRGNP10124 158 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 LMNB1P20700 586 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 ZNF526Q8TF50 670 aaPredicted RBP13.1□□□□□ -0.31
VAC14-204ENST00000563662 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 RNF181Q9P0P0 153 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 KDM2BQ8NHM5 1336 aa13.1□□□□□ -0.31
VAC14-204ENST00000563662 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
VAC14-204ENST00000563662 HOXB7P09629 217 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 NPR1P16066 1061 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 PARP10Q53GL7 1025 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
VAC14-204ENST00000563662 KLRG2A4D1S0 409 aaPredicted RBP13.08□□□□□ -0.32
VAC14-204ENST00000563662 HLFQ16534 295 aa13.08□□□□□ -0.32
VAC14-204ENST00000563662 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
VAC14-204ENST00000563662 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
VAC14-204ENST00000563662 APAF1O14727 1248 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 C21orf2O43822 256 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
VAC14-204ENST00000563662 GNAI1P63096 354 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 POTEHQ6S545 545 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
VAC14-204ENST00000563662 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
VAC14-204ENST00000563662 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
VAC14-204ENST00000563662 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
VAC14-204ENST00000563662 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
VAC14-204ENST00000563662 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
VAC14-204ENST00000563662 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
VAC14-204ENST00000563662 ZBTB3Q9H5J0 574 aa13.06□□□□□ -0.32
VAC14-204ENST00000563662 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
VAC14-204ENST00000563662 TOMM70O94826 608 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 PDIA6Q15084 440 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 CC2D2BQ6DHV5 1058 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 PRPF40BQ6NWY9 871 aaKnown RBP13.05□□□□□ -0.32
VAC14-204ENST00000563662 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 RTKN2Q8IZC4 609 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 CHD4Q14839 1912 aa13.05□□□□□ -0.32
VAC14-204ENST00000563662 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
VAC14-204ENST00000563662 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
VAC14-204ENST00000563662 NLRP3Q96P20 1036 aa13.04□□□□□ -0.32
VAC14-204ENST00000563662 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
VAC14-204ENST00000563662 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
VAC14-204ENST00000563662 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
VAC14-204ENST00000563662 RNF123Q5XPI4 1314 aa13.04□□□□□ -0.32
VAC14-204ENST00000563662 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
VAC14-204ENST00000563662 KIF3CO14782 793 aa13.03□□□□□ -0.32
VAC14-204ENST00000563662 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
VAC14-204ENST00000563662 GPTP24298 496 aa13.03□□□□□ -0.32
VAC14-204ENST00000563662 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms