RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
UBFD1-202ENST00000563366 LRP6O75581 1613 aa12.3□□□□□ -0.44
UBFD1-202ENST00000563366 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-202ENST00000563366 LARP1Q6PKG0 1096 aaKnown RBP12.3□□□□□ -0.44
UBFD1-202ENST00000563366 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-202ENST00000563366 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
UBFD1-202ENST00000563366 CDCA7Q9BWT1 371 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-202ENST00000563366 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
UBFD1-202ENST00000563366 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.3□□□□□ -0.44
UBFD1-202ENST00000563366 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 EVI5O60447 810 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 SLC34A2O95436 690 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
UBFD1-202ENST00000563366 ABCC4O15439 1325 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 SPATA31A6Q5VVP1 1343 aa12.29□□□□□ -0.44
UBFD1-202ENST00000563366 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
UBFD1-202ENST00000563366 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
UBFD1-202ENST00000563366 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
UBFD1-202ENST00000563366 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
UBFD1-202ENST00000563366 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.44
UBFD1-202ENST00000563366 SLIT2O94813 1529 aa12.27□□□□□ -0.44
UBFD1-202ENST00000563366 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.45
UBFD1-202ENST00000563366 CYP27B1O15528 508 aa12.27□□□□□ -0.45
UBFD1-202ENST00000563366 ZMYND10O75800 440 aa12.27□□□□□ -0.45
UBFD1-202ENST00000563366 RLBP1P12271 317 aa12.27□□□□□ -0.45
UBFD1-202ENST00000563366 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
UBFD1-202ENST00000563366 PTGER2P43116 358 aa12.26□□□□□ -0.45
UBFD1-202ENST00000563366 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
UBFD1-202ENST00000563366 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
UBFD1-202ENST00000563366 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
UBFD1-202ENST00000563366 HEG1Q9ULI3 1381 aa12.26□□□□□ -0.45
UBFD1-202ENST00000563366 C5P01031 1676 aa12.26□□□□□ -0.45
UBFD1-202ENST00000563366 CABP4P57796 275 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 TMEM57Q8N5G2 664 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 DDX12PQ92771 950 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 SLC24A3Q9HC58 644 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 KDM2BQ8NHM5 1336 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 ITGB4P16144 1822 aa12.25□□□□□ -0.45
UBFD1-202ENST00000563366 ADAMTS2O95450 1211 aa12.24□□□□□ -0.45
UBFD1-202ENST00000563366 INTS3Q68E01 1043 aaKnown RBP12.24□□□□□ -0.45
UBFD1-202ENST00000563366 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
UBFD1-202ENST00000563366 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
UBFD1-202ENST00000563366 RGS12O14924 1447 aa12.23□□□□□ -0.45
UBFD1-202ENST00000563366 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
UBFD1-202ENST00000563366 NUTM2BA6NNL0 878 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-202ENST00000563366 NUTM2EB1AL46 878 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-202ENST00000563366 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
UBFD1-202ENST00000563366 NUTM2AQ8IVF1 878 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-202ENST00000563366 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
UBFD1-202ENST00000563366 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
UBFD1-202ENST00000563366 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
UBFD1-202ENST00000563366 EXOC5O00471 708 aa12.22□□□□□ -0.45
UBFD1-202ENST00000563366 TCERG1O14776 1098 aaKnown RBP12.22□□□□□ -0.45
UBFD1-202ENST00000563366 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
UBFD1-202ENST00000563366 FLIIQ13045 1269 aa12.22□□□□□ -0.45
UBFD1-202ENST00000563366 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
UBFD1-202ENST00000563366 FMNL2Q96PY5 1086 aa12.22□□□□□ -0.45
UBFD1-202ENST00000563366 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
UBFD1-202ENST00000563366 DOT1LQ8TEK3 1739 aa12.21□□□□□ -0.45
UBFD1-202ENST00000563366 OSBPP22059 807 aa12.21□□□□□ -0.45
UBFD1-202ENST00000563366 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.45
UBFD1-202ENST00000563366 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
UBFD1-202ENST00000563366 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
UBFD1-202ENST00000563366 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 SPATA31A5Q5VU36 1347 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 SPATA31A7Q8IWB4 1347 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
UBFD1-202ENST00000563366 POTEJP0CG39 1038 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-202ENST00000563366 UNC5CLQ8IV45 518 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 DDX54Q8TDD1 881 aaKnown RBP12.2□□□□□ -0.46
UBFD1-202ENST00000563366 PCDHGA4Q9Y5G9 962 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 GLI3P10071 1580 aa12.2□□□□□ -0.46
UBFD1-202ENST00000563366 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
UBFD1-202ENST00000563366 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
UBFD1-202ENST00000563366 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
UBFD1-202ENST00000563366 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
UBFD1-202ENST00000563366 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
UBFD1-202ENST00000563366 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
UBFD1-202ENST00000563366 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
UBFD1-202ENST00000563366 VPS72Q15906 364 aa12.18□□□□□ -0.46
UBFD1-202ENST00000563366 DDB1Q16531 1140 aa12.18□□□□□ -0.46
UBFD1-202ENST00000563366 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
UBFD1-202ENST00000563366 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
UBFD1-202ENST00000563366 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
UBFD1-202ENST00000563366 DDX21Q9NR30 783 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBFD1-202ENST00000563366 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
UBFD1-202ENST00000563366 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
UBFD1-202ENST00000563366 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
UBFD1-202ENST00000563366 BCL9LQ86UU0 1499 aa12.17□□□□□ -0.46
UBFD1-202ENST00000563366 KCNQ3O43525 872 aa12.17□□□□□ -0.46
UBFD1-202ENST00000563366 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
UBFD1-202ENST00000563366 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
UBFD1-202ENST00000563366 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
UBFD1-202ENST00000563366 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms