RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 CAPN15O75808 1086 aa22.9■■□□□ 1.26
TSC2-219ENST00000563346 NBPF5PQ86XG9 351 aaPredicted RBP22.9■■□□□ 1.26
TSC2-219ENST00000563346 RBM46Q8TBY0 533 aaKnown RBP22.9■■□□□ 1.26
TSC2-219ENST00000563346 COL11A2P13942 1736 aaPredicted RBP22.9■■□□□ 1.26
TSC2-219ENST00000563346 C21orf2O43822 256 aa22.89■■□□□ 1.25
TSC2-219ENST00000563346 NFE2L2Q16236 605 aa22.89■■□□□ 1.25
TSC2-219ENST00000563346 PLEKHF1Q96S99 279 aa22.89■■□□□ 1.25
TSC2-219ENST00000563346 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
TSC2-219ENST00000563346 NFKBIEO00221 500 aa22.88■■□□□ 1.25
TSC2-219ENST00000563346 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
TSC2-219ENST00000563346 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
TSC2-219ENST00000563346 CNKSR1Q969H4 720 aa22.88■■□□□ 1.25
TSC2-219ENST00000563346 LAMB4A4D0S4 1761 aa22.88■■□□□ 1.25
TSC2-219ENST00000563346 CCDC88AQ3V6T2 1871 aa22.88■■□□□ 1.25
TSC2-219ENST00000563346 PRELPP51888 382 aa22.87■■□□□ 1.25
TSC2-219ENST00000563346 TIAM2Q8IVF5 1701 aa22.86■■□□□ 1.25
TSC2-219ENST00000563346 STYK1Q6J9G0 422 aa22.86■■□□□ 1.25
TSC2-219ENST00000563346 MASTLQ96GX5 879 aa22.86■■□□□ 1.25
TSC2-219ENST00000563346 NIP7Q9Y221 180 aaKnown RBP eCLIP22.86■■□□□ 1.25
TSC2-219ENST00000563346 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
TSC2-219ENST00000563346 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
TSC2-219ENST00000563346 SRGNP10124 158 aa22.85■■□□□ 1.25
TSC2-219ENST00000563346 TPTE2Q6XPS3 522 aa22.85■■□□□ 1.25
TSC2-219ENST00000563346 THUMPD2Q9BTF0 503 aaKnown RBP22.85■■□□□ 1.25
TSC2-219ENST00000563346 CACNA1SQ13698 1873 aa22.85■■□□□ 1.25
TSC2-219ENST00000563346 RGL2O15211 777 aa22.84■■□□□ 1.25
TSC2-219ENST00000563346 FSTL1Q12841 308 aa22.84■■□□□ 1.25
TSC2-219ENST00000563346 RALBP1Q15311 655 aa22.84■■□□□ 1.25
TSC2-219ENST00000563346 COL13A1Q5TAT6 717 aaPredicted RBP22.84■■□□□ 1.25
TSC2-219ENST00000563346 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
TSC2-219ENST00000563346 FAM177BA6PVY3 158 aa22.83■■□□□ 1.25
TSC2-219ENST00000563346 PRPF40BQ6NWY9 871 aaKnown RBP22.83■■□□□ 1.25
TSC2-219ENST00000563346 FER1L6Q2WGJ9 1857 aa22.82■■□□□ 1.24
TSC2-219ENST00000563346 VEGFAP15692 232 aaPredicted RBP22.82■■□□□ 1.24
TSC2-219ENST00000563346 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
TSC2-219ENST00000563346 SOGA3Q5TF21 947 aa22.82■■□□□ 1.24
TSC2-219ENST00000563346 KLRG1Q96E93 195 aa22.82■■□□□ 1.24
TSC2-219ENST00000563346 TAOK3Q9H2K8 898 aa22.82■■□□□ 1.24
TSC2-219ENST00000563346 SLX4Q8IY92 1834 aa22.82■■□□□ 1.24
TSC2-219ENST00000563346 GTF2E1P29083 439 aaPredicted RBP22.81■■□□□ 1.24
TSC2-219ENST00000563346 HLFQ16534 295 aa22.81■■□□□ 1.24
TSC2-219ENST00000563346 ERFEQ4G0M1 354 aa22.81■■□□□ 1.24
TSC2-219ENST00000563346 DPY19L2Q6NUT2 758 aa22.81■■□□□ 1.24
TSC2-219ENST00000563346 RRP7AQ9Y3A4 280 aaKnown RBP22.81■■□□□ 1.24
TSC2-219ENST00000563346 ARFGEF2Q9Y6D5 1785 aa22.81■■□□□ 1.24
TSC2-219ENST00000563346 KIF6Q6ZMV9 814 aa22.8■■□□□ 1.24
TSC2-219ENST00000563346 SMC1BQ8NDV3 1235 aa22.8■■□□□ 1.24
TSC2-219ENST00000563346 NPR1P16066 1061 aa22.79■■□□□ 1.24
TSC2-219ENST00000563346 LTBP3Q9NS15 1303 aa22.79■■□□□ 1.24
TSC2-219ENST00000563346 MYL6BP14649 208 aa22.78■■□□□ 1.24
TSC2-219ENST00000563346 RIPK4P57078 832 aa22.78■■□□□ 1.24
TSC2-219ENST00000563346 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
TSC2-219ENST00000563346 DICER1Q9UPY3 1922 aaKnown RBP22.78■■□□□ 1.24
TSC2-219ENST00000563346 ERVV-1B6SEH8 477 aa22.77■■□□□ 1.24
TSC2-219ENST00000563346 DDX10Q13206 875 aaKnown RBP22.77■■□□□ 1.24
TSC2-219ENST00000563346 PCNTO95613 3336 aa22.77■■□□□ 1.24
TSC2-219ENST00000563346 MAP3K15Q6ZN16 1313 aa22.77■■□□□ 1.24
TSC2-219ENST00000563346 KLRG2A4D1S0 409 aaPredicted RBP22.76■■□□□ 1.23
TSC2-219ENST00000563346 CCDC93Q567U6 631 aa22.76■■□□□ 1.23
TSC2-219ENST00000563346 NYXQ9GZU5 481 aa22.76■■□□□ 1.23
TSC2-219ENST00000563346 LMOD3Q0VAK6 560 aa22.75■■□□□ 1.23
TSC2-219ENST00000563346 TTLL7Q6ZT98 887 aa22.75■■□□□ 1.23
TSC2-219ENST00000563346 NUP98P52948 1817 aa22.74■■□□□ 1.23
TSC2-219ENST00000563346 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
TSC2-219ENST00000563346 ALDH1B1P30837 517 aa22.73■■□□□ 1.23
TSC2-219ENST00000563346 ZBTB3Q9H5J0 574 aa22.73■■□□□ 1.23
TSC2-219ENST00000563346 ERBB4Q15303 1308 aa22.73■■□□□ 1.23
TSC2-219ENST00000563346 GPTP24298 496 aa22.72■■□□□ 1.23
TSC2-219ENST00000563346 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
TSC2-219ENST00000563346 NUTM1Q86Y26 1132 aa22.72■■□□□ 1.23
TSC2-219ENST00000563346 TNS4Q8IZW8 715 aa22.72■■□□□ 1.23
TSC2-219ENST00000563346 JMYQ8N9B5 988 aa22.72■■□□□ 1.23
TSC2-219ENST00000563346 C7orf43Q8WVR3 580 aa22.72■■□□□ 1.23
TSC2-219ENST00000563346 EIF2S2P20042 333 aaKnown RBP22.71■■□□□ 1.23
TSC2-219ENST00000563346 POTECB2RU33 542 aa22.7■■□□□ 1.22
TSC2-219ENST00000563346 FKBP4Q02790 459 aaKnown RBP eCLIP22.7■■□□□ 1.22
TSC2-219ENST00000563346 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
TSC2-219ENST00000563346 RTKN2Q8IZC4 609 aa22.7■■□□□ 1.22
TSC2-219ENST00000563346 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
TSC2-219ENST00000563346 ABCC12Q96J65 1359 aa22.69■■□□□ 1.22
TSC2-219ENST00000563346 DDNO94850 711 aaPredicted RBP22.69■■□□□ 1.22
TSC2-219ENST00000563346 WDR43Q15061 677 aaKnown RBP eCLIP22.69■■□□□ 1.22
TSC2-219ENST00000563346 NEUROD2Q15784 382 aa22.69■■□□□ 1.22
TSC2-219ENST00000563346 OLFM4Q6UX06 510 aa22.68■■□□□ 1.22
TSC2-219ENST00000563346 RPGRQ92834 1020 aaKnown RBP22.68■■□□□ 1.22
TSC2-219ENST00000563346 IBTKQ9P2D0 1353 aaPredicted RBP22.67■■□□□ 1.22
TSC2-219ENST00000563346 UBN2Q6ZU65 1347 aa22.67■■□□□ 1.22
TSC2-219ENST00000563346 SUSD4Q5VX71 490 aa22.67■■□□□ 1.22
TSC2-219ENST00000563346 GIGYF2Q6Y7W6 1299 aaKnown RBP22.67■■□□□ 1.22
TSC2-219ENST00000563346 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
TSC2-219ENST00000563346 CRY2Q49AN0 593 aa22.66■■□□□ 1.22
TSC2-219ENST00000563346 ZNF34Q8IZ26 560 aa22.66■■□□□ 1.22
TSC2-219ENST00000563346 PPP1R42Q7Z4L9 355 aa22.65■■□□□ 1.22
TSC2-219ENST00000563346 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
TSC2-219ENST00000563346 IQCA1LA6NCM1 817 aa22.64■■□□□ 1.21
TSC2-219ENST00000563346 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
TSC2-219ENST00000563346 SYNE4Q8N205 404 aa22.64■■□□□ 1.21
TSC2-219ENST00000563346 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
TSC2-219ENST00000563346 LAS1LQ9Y4W2 734 aaKnown RBP22.64■■□□□ 1.21
TSC2-219ENST00000563346 RIC1Q4ADV7 1423 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms