RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 AMPD1P23109 780 aa6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 TBCELQ5QJ74 424 aa6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 OGFOD1Q8N543 542 aa6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 AVENQ9NQS1 362 aaPredicted RBP6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 M0R2N6 131 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 MSTNO14793 375 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 ADH6P28332 368 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 ALYREFQ86V81 257 aaKnown RBP6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 PPP1R12CQ9BZL4 782 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 STRN4Q9NRL3 753 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 MARK1Q9P0L2 795 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 ZNF232Q9UNY5 417 aa6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 GPC6Q9Y625 555 aaPredicted RBP6.32□□□□□ -1.4
SHCBP1-202ENST00000563219 DKK1O94907 266 aa6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 COL8A1P27658 744 aa6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 CFAP70Q5T0N1 1121 aa6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 ZNF468Q5VIY5 522 aaPredicted RBP6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 LRRC69Q6ZNQ3 347 aa6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 NEUROD4Q9HD90 331 aa6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 PRR12Q9ULL5 1215 aa6.31□□□□□ -1.4
SHCBP1-202ENST00000563219 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 KRBA1A5PL33 1030 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 PIK3R2O00459 728 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 PSMA6P60900 246 aaKnown RBP6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 SH3PXD2AQ5TCZ1 1133 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 C1orf53Q5VUE5 145 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 POTEAQ6S8J7 498 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 FCHSD1Q86WN1 690 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 SIX5Q8N196 739 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 SPOCK3Q9BQ16 436 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 TSPAN10Q9H1Z9 355 aaPredicted RBP6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
SHCBP1-202ENST00000563219 GNB5O14775 395 aa6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 DGKGP49619 791 aa6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 HIRAP54198 1017 aaPredicted RBP6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 CHSY3Q70JA7 882 aa6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 SUV39H2Q9H5I1 410 aa6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 CHMP3Q9Y3E7 222 aa6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 HCN4Q9Y3Q4 1203 aa6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 MAFBQ9Y5Q3 323 aaPredicted RBP6.29□□□□□ -1.4
SHCBP1-202ENST00000563219 SFI1A8K8P3 1242 aa6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 PROCP04070 461 aa6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 RASA1P20936 1047 aa6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 TSEN2Q8NCE0 465 aaKnown RBP6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 RHPN1Q8TCX5 695 aa6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 ZNF594Q96JF6 807 aaPredicted RBP6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 ARID3AQ99856 593 aa6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
SHCBP1-202ENST00000563219 C21orf2O43822 256 aa6.27□□□□□ -1.41
SHCBP1-202ENST00000563219 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
SHCBP1-202ENST00000563219 SFSWAPQ12872 951 aaKnown RBP6.27□□□□□ -1.41
SHCBP1-202ENST00000563219 SYT9Q86SS6 491 aa6.27□□□□□ -1.41
SHCBP1-202ENST00000563219 ANKIB1Q9P2G1 1089 aa6.27□□□□□ -1.41
SHCBP1-202ENST00000563219 ATAD2Q6PL18 1390 aa6.27□□□□□ -1.41
SHCBP1-202ENST00000563219 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 ELOA3DA6NLF2 546 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 PPP1R12BO60237 982 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 LMOD1P29536 600 aaPredicted RBP6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 SEC13P55735 322 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 GRIN2CQ14957 1233 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 ELOA3BQ3SY89 546 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 STAG2Q8N3U4 1231 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 ELOA3Q8NG57 546 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 GAS2L2Q8NHY3 880 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 MDFIQ99750 246 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 PHACTR1Q9C0D0 580 aa6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 NOP53Q9NZM5 478 aaKnown RBP6.26□□□□□ -1.41
SHCBP1-202ENST00000563219 SIN3BO75182 1162 aa6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 PPP1R15AO75807 674 aaPredicted RBP6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 ALAS2P22557 587 aa6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 KANK4Q5T7N3 995 aaPredicted RBP6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 LARP1Q6PKG0 1096 aaKnown RBP6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 PBXIP1Q96AQ6 731 aa6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 SUSD3Q96L08 255 aa6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 SLC30A3Q99726 388 aa6.25□□□□□ -1.41
SHCBP1-202ENST00000563219 ADARB2-AS1A8MUL3 147 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 KCNQ4P56696 695 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 PTK7Q13308 1070 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 ALDH16A1Q8IZ83 802 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 ZNF280CQ8ND82 737 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 SCG3Q8WXD2 468 aaKnown RBP6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 CEP63Q96MT8 703 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 C2orf49Q9BVC5 232 aaPredicted RBP6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 BRD7Q9NPI1 651 aa6.24□□□□□ -1.41
SHCBP1-202ENST00000563219 RFX1P22670 979 aa6.23□□□□□ -1.41
SHCBP1-202ENST00000563219 SPEM2Q0P670 501 aa6.23□□□□□ -1.41
SHCBP1-202ENST00000563219 CRTC2Q53ET0 693 aaPredicted RBP6.23□□□□□ -1.41
SHCBP1-202ENST00000563219 TNFRSF25Q93038 417 aa6.23□□□□□ -1.41
SHCBP1-202ENST00000563219 HSH2DQ96JZ2 352 aa6.23□□□□□ -1.41
SHCBP1-202ENST00000563219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 C1QTNF9BB2RNN3 333 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 ADAM23O75077 832 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 BAG6P46379 1132 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 NEUROD1Q13562 356 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 CHMP7Q8WUX9 453 aaPredicted RBP6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms