RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
SPG7-207ENST00000563218 USP16Q9Y5T5 823 aa17.84■□□□□ 0.45
SPG7-207ENST00000563218 SCN4AP35499 1836 aa17.84■□□□□ 0.45
SPG7-207ENST00000563218 MCM10Q7L590 875 aa17.83■□□□□ 0.44
SPG7-207ENST00000563218 TEX13AQ9BXU3 409 aaPredicted RBP17.83■□□□□ 0.44
SPG7-207ENST00000563218 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
SPG7-207ENST00000563218 PDE6BP35913 854 aa17.82■□□□□ 0.44
SPG7-207ENST00000563218 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
SPG7-207ENST00000563218 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
SPG7-207ENST00000563218 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
SPG7-207ENST00000563218 MIER1Q8N108 512 aa17.81■□□□□ 0.44
SPG7-207ENST00000563218 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
SPG7-207ENST00000563218 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
SPG7-207ENST00000563218 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
SPG7-207ENST00000563218 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
SPG7-207ENST00000563218 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
SPG7-207ENST00000563218 SRGNP10124 158 aa17.79■□□□□ 0.44
SPG7-207ENST00000563218 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
SPG7-207ENST00000563218 ADAMTSL1Q8N6G6 1762 aa17.79■□□□□ 0.44
SPG7-207ENST00000563218 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 NPHP1O15259 732 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 ANP32CO43423 234 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
SPG7-207ENST00000563218 ST5P78524 1137 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.447e-6■□□□□ 8.1
SPG7-207ENST00000563218 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
SPG7-207ENST00000563218 OLFM4Q6UX06 510 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
SPG7-207ENST00000563218 LTBP3Q9NS15 1303 aa17.77■□□□□ 0.44
SPG7-207ENST00000563218 DDNO94850 711 aaPredicted RBP17.77■□□□□ 0.44
SPG7-207ENST00000563218 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
SPG7-207ENST00000563218 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.44
SPG7-207ENST00000563218 LAMB2P55268 1798 aa17.76■□□□□ 0.43
SPG7-207ENST00000563218 FAM177BA6PVY3 158 aa17.76■□□□□ 0.43
SPG7-207ENST00000563218 MASTLQ96GX5 879 aa17.76■□□□□ 0.43
SPG7-207ENST00000563218 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
SPG7-207ENST00000563218 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
SPG7-207ENST00000563218 NBPF5PQ86XG9 351 aaPredicted RBP17.75■□□□□ 0.43
SPG7-207ENST00000563218 CNKSR1Q969H4 720 aa17.75■□□□□ 0.43
SPG7-207ENST00000563218 MIS18AQ9NYP9 233 aa17.75■□□□□ 0.43
SPG7-207ENST00000563218 ANKRD36CQ5JPF3 1778 aa17.74■□□□□ 0.43
SPG7-207ENST00000563218 HLFQ16534 295 aa17.74■□□□□ 0.43
SPG7-207ENST00000563218 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
SPG7-207ENST00000563218 C7orf43Q8WVR3 580 aa17.74■□□□□ 0.43
SPG7-207ENST00000563218 LTBP1Q14766 1721 aa17.74■□□□□ 0.43
SPG7-207ENST00000563218 COL4A5P29400 1685 aa17.74■□□□□ 0.43
SPG7-207ENST00000563218 HSPA1AP0DMV8 641 aaKnown RBP17.73■□□□□ 0.43
SPG7-207ENST00000563218 HSPA1BP0DMV9 641 aaKnown RBP17.73■□□□□ 0.43
SPG7-207ENST00000563218 RTF1Q92541 710 aaKnown RBP17.73■□□□□ 0.43
SPG7-207ENST00000563218 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
SPG7-207ENST00000563218 NUDCQ9Y266 331 aa17.73■□□□□ 0.43
SPG7-207ENST00000563218 ABCC12Q96J65 1359 aa17.73■□□□□ 0.43
SPG7-207ENST00000563218 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
SPG7-207ENST00000563218 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
SPG7-207ENST00000563218 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
SPG7-207ENST00000563218 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
SPG7-207ENST00000563218 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
SPG7-207ENST00000563218 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
SPG7-207ENST00000563218 TAF1P21675 1872 aa17.71■□□□□ 0.43
SPG7-207ENST00000563218 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
SPG7-207ENST00000563218 CHADLQ6NUI6 762 aa17.7■□□□□ 0.42
SPG7-207ENST00000563218 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
SPG7-207ENST00000563218 NPR1P16066 1061 aa17.69■□□□□ 0.42
SPG7-207ENST00000563218 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
SPG7-207ENST00000563218 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
SPG7-207ENST00000563218 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
SPG7-207ENST00000563218 TAF7Q15545 349 aaPredicted RBP17.68■□□□□ 0.42
SPG7-207ENST00000563218 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
SPG7-207ENST00000563218 TRPM7Q96QT4 1865 aa17.68■□□□□ 0.42
SPG7-207ENST00000563218 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
SPG7-207ENST00000563218 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
SPG7-207ENST00000563218 SLC34A2O95436 690 aa17.67■□□□□ 0.42
SPG7-207ENST00000563218 TTLL7Q6ZT98 887 aa17.67■□□□□ 0.42
SPG7-207ENST00000563218 NUTM1Q86Y26 1132 aa17.67■□□□□ 0.42
SPG7-207ENST00000563218 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
SPG7-207ENST00000563218 TPTE2Q6XPS3 522 aa17.66■□□□□ 0.42
SPG7-207ENST00000563218 L3MBTL3Q96JM7 780 aaPredicted RBP17.66■□□□□ 0.42
SPG7-207ENST00000563218 PASKQ96RG2 1323 aa17.66■□□□□ 0.42
SPG7-207ENST00000563218 PLEKHF1Q96S99 279 aa17.65■□□□□ 0.42
SPG7-207ENST00000563218 CREBZFQ9NS37 354 aa17.65■□□□□ 0.42
SPG7-207ENST00000563218 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
SPG7-207ENST00000563218 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
SPG7-207ENST00000563218 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
SPG7-207ENST00000563218 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
SPG7-207ENST00000563218 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 MYL6BP14649 208 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 GPTP24298 496 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
SPG7-207ENST00000563218 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
SPG7-207ENST00000563218 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 PRKRIP1Q9H875 184 aaPredicted RBP17.63■□□□□ 0.41
SPG7-207ENST00000563218 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 CNTNAP1P78357 1384 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
SPG7-207ENST00000563218 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
SPG7-207ENST00000563218 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
SPG7-207ENST00000563218 RGL2O15211 777 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms