RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 NFKBIEO00221 500 aa20.6■□□□□ 0.89
USB1-208ENST00000563207 HSPA6P17066 643 aa20.6■□□□□ 0.89
USB1-208ENST00000563207 HLFQ16534 295 aa20.6■□□□□ 0.89
USB1-208ENST00000563207 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
USB1-208ENST00000563207 PNISRQ8TF01 805 aaKnown RBP20.6■□□□□ 0.89
USB1-208ENST00000563207 ADAMTS8Q9UP79 889 aa20.6■□□□□ 0.89
USB1-208ENST00000563207 SLX4Q8IY92 1834 aa20.6■□□□□ 0.89
USB1-208ENST00000563207 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
USB1-208ENST00000563207 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
USB1-208ENST00000563207 CNBD1Q8NA66 436 aa20.59■□□□□ 0.89
USB1-208ENST00000563207 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
USB1-208ENST00000563207 FAM177BA6PVY3 158 aa20.58■□□□□ 0.89
USB1-208ENST00000563207 C21orf2O43822 256 aa20.58■□□□□ 0.89
USB1-208ENST00000563207 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
USB1-208ENST00000563207 RRAGCQ9HB90 399 aa20.58■□□□□ 0.89
USB1-208ENST00000563207 PDE6BP35913 854 aa20.57■□□□□ 0.88
USB1-208ENST00000563207 TOMM70O94826 608 aa20.56■□□□□ 0.88
USB1-208ENST00000563207 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
USB1-208ENST00000563207 TIAM2Q8IVF5 1701 aa20.56■□□□□ 0.88
USB1-208ENST00000563207 NPHP1O15259 732 aa20.55■□□□□ 0.88
USB1-208ENST00000563207 TTLL7Q6ZT98 887 aa20.55■□□□□ 0.88
USB1-208ENST00000563207 NBPF5PQ86XG9 351 aaPredicted RBP20.55■□□□□ 0.88
USB1-208ENST00000563207 CCDC146Q8IYE0 955 aa20.55■□□□□ 0.88
USB1-208ENST00000563207 RRP7AQ9Y3A4 280 aaKnown RBP20.55■□□□□ 0.88
USB1-208ENST00000563207 FER1L6Q2WGJ9 1857 aa20.55■□□□□ 0.88
USB1-208ENST00000563207 SRGNP10124 158 aa20.54■□□□□ 0.88
USB1-208ENST00000563207 LMNB1P20700 586 aa20.54■□□□□ 0.88
USB1-208ENST00000563207 NIP7Q9Y221 180 aaKnown RBP eCLIP20.54■□□□□ 0.88
USB1-208ENST00000563207 NUP98P52948 1817 aa20.53■□□□□ 0.88
USB1-208ENST00000563207 MYL6BP14649 208 aa20.53■□□□□ 0.88
USB1-208ENST00000563207 RIPK4P57078 832 aa20.53■□□□□ 0.88
USB1-208ENST00000563207 ST5P78524 1137 aa20.53■□□□□ 0.88
USB1-208ENST00000563207 CLEC4GQ6UXB4 293 aa20.53■□□□□ 0.88
USB1-208ENST00000563207 PRPF40BQ6NWY9 871 aaKnown RBP20.52■□□□□ 0.88
USB1-208ENST00000563207 OLFM4Q6UX06 510 aa20.52■□□□□ 0.88
USB1-208ENST00000563207 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
USB1-208ENST00000563207 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
USB1-208ENST00000563207 HTRA3P83110 453 aa20.51■□□□□ 0.87
USB1-208ENST00000563207 MIER1Q8N108 512 aa20.51■□□□□ 0.87
USB1-208ENST00000563207 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
USB1-208ENST00000563207 KDM2BQ8NHM5 1336 aa20.51■□□□□ 0.87
USB1-208ENST00000563207 TMPOP42166 694 aaKnown RBP20.5■□□□□ 0.87
USB1-208ENST00000563207 NEUROD2Q15784 382 aa20.5■□□□□ 0.87
USB1-208ENST00000563207 STYK1Q6J9G0 422 aa20.5■□□□□ 0.87
USB1-208ENST00000563207 ANXA1P04083 346 aa20.49■□□□□ 0.87
USB1-208ENST00000563207 MASTLQ96GX5 879 aa20.49■□□□□ 0.87
USB1-208ENST00000563207 ZBTB3Q9H5J0 574 aa20.49■□□□□ 0.87
USB1-208ENST00000563207 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
USB1-208ENST00000563207 DICER1Q9UPY3 1922 aaKnown RBP20.49■□□□□ 0.87
USB1-208ENST00000563207 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
USB1-208ENST00000563207 PROSER3Q2NL68 480 aa20.48■□□□□ 0.87
USB1-208ENST00000563207 NUTM1Q86Y26 1132 aa20.48■□□□□ 0.87
USB1-208ENST00000563207 C7orf43Q8WVR3 580 aa20.48■□□□□ 0.87
USB1-208ENST00000563207 CNKSR1Q969H4 720 aa20.48■□□□□ 0.87
USB1-208ENST00000563207 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
USB1-208ENST00000563207 ABCC12Q96J65 1359 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 KLRG2A4D1S0 409 aaPredicted RBP20.47■□□□□ 0.87
USB1-208ENST00000563207 POTECB2RU33 542 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 GPTP24298 496 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 LMOD3Q0VAK6 560 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 KRT24Q2M2I5 525 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 TPTE2Q6XPS3 522 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
USB1-208ENST00000563207 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
USB1-208ENST00000563207 EIF2S2P20042 333 aaKnown RBP20.46■□□□□ 0.87
USB1-208ENST00000563207 PDIA6Q15084 440 aa20.46■□□□□ 0.87
USB1-208ENST00000563207 LRP10Q7Z4F1 713 aa20.46■□□□□ 0.87
USB1-208ENST00000563207 C16orf71Q8IYS4 520 aaPredicted RBP20.46■□□□□ 0.87
USB1-208ENST00000563207 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
USB1-208ENST00000563207 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
USB1-208ENST00000563207 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
USB1-208ENST00000563207 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
USB1-208ENST00000563207 DNAJC5GQ8N7S2 189 aa20.45■□□□□ 0.86
USB1-208ENST00000563207 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
USB1-208ENST00000563207 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
USB1-208ENST00000563207 ERVV-1B6SEH8 477 aa20.44■□□□□ 0.86
USB1-208ENST00000563207 NPR1P16066 1061 aa20.44■□□□□ 0.86
USB1-208ENST00000563207 SUSD4Q5VX71 490 aa20.44■□□□□ 0.86
USB1-208ENST00000563207 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
USB1-208ENST00000563207 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
USB1-208ENST00000563207 RGL2O15211 777 aa20.43■□□□□ 0.86
USB1-208ENST00000563207 APLP1P51693 650 aa20.43■□□□□ 0.86
USB1-208ENST00000563207 KIF6Q6ZMV9 814 aa20.43■□□□□ 0.86
USB1-208ENST00000563207 APAF1O14727 1248 aa20.42■□□□□ 0.86
USB1-208ENST00000563207 GTF2E1P29083 439 aaPredicted RBP20.42■□□□□ 0.86
USB1-208ENST00000563207 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
USB1-208ENST00000563207 ZNF34Q8IZ26 560 aa20.42■□□□□ 0.86
USB1-208ENST00000563207 DDNO94850 711 aaPredicted RBP20.41■□□□□ 0.86
USB1-208ENST00000563207 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
USB1-208ENST00000563207 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
USB1-208ENST00000563207 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
USB1-208ENST00000563207 LTBP3Q9NS15 1303 aa20.41■□□□□ 0.86
USB1-208ENST00000563207 FSTL1Q12841 308 aa20.39■□□□□ 0.85
USB1-208ENST00000563207 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
USB1-208ENST00000563207 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
USB1-208ENST00000563207 CHL1O00533 1208 aa20.38■□□□□ 0.85
USB1-208ENST00000563207 NTSR2O95665 410 aa20.38■□□□□ 0.85
USB1-208ENST00000563207 POTEIP0CG38 1075 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms