RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 COL15A1P39059 1388 aa12.28□□□□□ -0.44
CHRFAM7A-204ENST00000562729 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
CHRFAM7A-204ENST00000562729 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
CHRFAM7A-204ENST00000562729 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
CHRFAM7A-204ENST00000562729 SOS1Q07889 1333 aaPredicted RBP12.27□□□□□ -0.45
CHRFAM7A-204ENST00000562729 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
CHRFAM7A-204ENST00000562729 CEMIPQ8WUJ3 1361 aa12.27□□□□□ -0.45
CHRFAM7A-204ENST00000562729 SIPA1L3O60292 1781 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-204ENST00000562729 NPHP1O15259 732 aa12.26□□□□□ -0.45
CHRFAM7A-204ENST00000562729 YBX3P16989 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHRFAM7A-204ENST00000562729 FAM212AQ96EL1 285 aa12.26□□□□□ -0.45
CHRFAM7A-204ENST00000562729 TGFB2P61812 414 aa12.25□□□□□ -0.45
CHRFAM7A-204ENST00000562729 TAF7Q15545 349 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-204ENST00000562729 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
CHRFAM7A-204ENST00000562729 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
CHRFAM7A-204ENST00000562729 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
CHRFAM7A-204ENST00000562729 A0A0G2JLW4 131 aa12.24□□□□□ -0.45
CHRFAM7A-204ENST00000562729 SNRPA1P09661 255 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-204ENST00000562729 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-204ENST00000562729 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
CHRFAM7A-204ENST00000562729 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
CHRFAM7A-204ENST00000562729 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
CHRFAM7A-204ENST00000562729 UTRNP46939 3433 aa12.23□□□□□ -0.45
CHRFAM7A-204ENST00000562729 KCNQ3O43525 872 aa12.23□□□□□ -0.45
CHRFAM7A-204ENST00000562729 LMOD3Q0VAK6 560 aa12.23□□□□□ -0.45
CHRFAM7A-204ENST00000562729 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
CHRFAM7A-204ENST00000562729 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 A1BGP04217 495 aa12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 RIPK4P57078 832 aa12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 PLEKHF1Q96S99 279 aa12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 MIS18AQ9NYP9 233 aa12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 N4BP2Q86UW6 1770 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-204ENST00000562729 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 DPEP1P16444 411 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 DDR1Q08345 913 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 NFIXQ14938 502 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 NEUROD2Q15784 382 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
CHRFAM7A-204ENST00000562729 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.46
CHRFAM7A-204ENST00000562729 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 SERPINB2P05120 415 aa12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 TM4SF1P30408 202 aa12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 DZIP3Q86Y13 1208 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 USP16Q9Y5T5 823 aa12.2□□□□□ -0.46
CHRFAM7A-204ENST00000562729 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
CHRFAM7A-204ENST00000562729 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
CHRFAM7A-204ENST00000562729 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
CHRFAM7A-204ENST00000562729 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
CHRFAM7A-204ENST00000562729 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
CHRFAM7A-204ENST00000562729 RRP7AQ9Y3A4 280 aaKnown RBP12.19□□□□□ -0.46
CHRFAM7A-204ENST00000562729 PRAMEF22A3QJZ6 481 aa12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 CHRNA5P30532 468 aa12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 NGEFQ8N5V2 710 aa12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 PRKRIP1Q9H875 184 aaPredicted RBP12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
CHRFAM7A-204ENST00000562729 H0YIN7 160 aa12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 PLCG2P16885 1265 aa12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 TMPOP42166 694 aaKnown RBP12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ST5P78524 1137 aa12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 KIF6Q6ZMV9 814 aa12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ZNF526Q8TF50 670 aaPredicted RBP12.17□□□□□ -0.46
CHRFAM7A-204ENST00000562729 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 MYL6BP14649 208 aa12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 PDE6BP35913 854 aa12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
CHRFAM7A-204ENST00000562729 LAMB4A4D0S4 1761 aa12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 GTF2E1P29083 439 aaPredicted RBP12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ZNF622Q969S3 477 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 ADAMTS8Q9UP79 889 aa12.15□□□□□ -0.46
CHRFAM7A-204ENST00000562729 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
CHRFAM7A-204ENST00000562729 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
CHRFAM7A-204ENST00000562729 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
CHRFAM7A-204ENST00000562729 EIF2S2P20042 333 aaKnown RBP12.14□□□□□ -0.47
CHRFAM7A-204ENST00000562729 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
CHRFAM7A-204ENST00000562729 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
CHRFAM7A-204ENST00000562729 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 ANP32CO43423 234 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 ST18O60284 1047 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 PYGBP11216 843 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms