RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 NFAT5O94916 1531 aa8.01□□□□□ -1.13
CDH13-206ENST00000562601 USP54Q70EL1 1684 aa8.01□□□□□ -1.13
CDH13-206ENST00000562601 SPATA31A5Q5VU36 1347 aa8.01□□□□□ -1.13
CDH13-206ENST00000562601 SPATA31A7Q8IWB4 1347 aa8.01□□□□□ -1.13
CDH13-206ENST00000562601 CDK12Q9NYV4 1490 aaPredicted RBP8□□□□□ -1.13
CDH13-206ENST00000562601 FYB1O15117 783 aa8□□□□□ -1.13
CDH13-206ENST00000562601 HOXA2O43364 376 aa8□□□□□ -1.13
CDH13-206ENST00000562601 RGS20O76081 388 aa8□□□□□ -1.13
CDH13-206ENST00000562601 Q3C1V9 767 aa8□□□□□ -1.13
CDH13-206ENST00000562601 PUS10Q3MIT2 529 aaKnown RBP8□□□□□ -1.13
CDH13-206ENST00000562601 PANK3Q9H999 370 aa8□□□□□ -1.13
CDH13-206ENST00000562601 NSD3Q9BZ95 1437 aa8□□□□□ -1.13
CDH13-206ENST00000562601 OVOS2A0A0J9YW53 1432 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 CSB-PGBD3P0DP91 1061 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 GGCXP38435 758 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 FAM182BQ5T319 152 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 OVOS2Q6IE36 1432 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 SCUBE3Q8IX30 993 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 ZNF516Q92618 1163 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 SALL2Q9Y467 1007 aaPredicted RBP7.99□□□□□ -1.13
CDH13-206ENST00000562601 COL5A2P05997 1499 aaPredicted RBP7.99□□□□□ -1.13
CDH13-206ENST00000562601 KIF7Q2M1P5 1343 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 SPATA31A1Q5TZJ5 1347 aa7.99□□□□□ -1.13
CDH13-206ENST00000562601 AATKQ6ZMQ8 1374 aa7.98□□□□□ -1.13
CDH13-206ENST00000562601 EP400Q96L91 3159 aa7.98□□□□□ -1.13
CDH13-206ENST00000562601 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
CDH13-206ENST00000562601 RRS1Q15050 365 aaKnown RBP7.98□□□□□ -1.13
CDH13-206ENST00000562601 NEUROD2Q15784 382 aa7.98□□□□□ -1.13
CDH13-206ENST00000562601 TOM1L2Q6ZVM7 507 aa7.98□□□□□ -1.13
CDH13-206ENST00000562601 SPIRE2Q8WWL2 714 aa7.98□□□□□ -1.13
CDH13-206ENST00000562601 LTV1Q96GA3 475 aaPredicted RBP7.98□□□□□ -1.13
CDH13-206ENST00000562601 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
CDH13-206ENST00000562601 ADH1BP00325 375 aa7.97□□□□□ -1.13
CDH13-206ENST00000562601 TNNT2P45379 298 aaPredicted RBP7.97□□□□□ -1.13
CDH13-206ENST00000562601 CNGB1Q14028 1251 aaPredicted RBP7.97□□□□□ -1.13
CDH13-206ENST00000562601 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
CDH13-206ENST00000562601 SLC27A5Q9Y2P5 690 aa7.97□□□□□ -1.13
CDH13-206ENST00000562601 RGPD2P0DJD1 1756 aa7.97□□□□□ -1.13
CDH13-206ENST00000562601 MAP2P11137 1827 aaKnown RBP7.96□□□□□ -1.13
CDH13-206ENST00000562601 GJA5P36382 358 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 AMPHP49418 695 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 KRT27Q7Z3Y8 459 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 TCP11L2Q8N4U5 519 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 SPSB2Q99619 263 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 GPBP1L1Q9HC44 474 aaPredicted RBP7.96□□□□□ -1.14
CDH13-206ENST00000562601 NLRP2Q9NX02 1062 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 MAP3K19Q56UN5 1328 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 WDR17Q8IZU2 1322 aa7.96□□□□□ -1.14
CDH13-206ENST00000562601 THSD7AQ9UPZ6 1657 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 CRB1P82279 1406 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 PPM1GO15355 546 aaPredicted RBP7.95□□□□□ -1.14
CDH13-206ENST00000562601 FDX1P10109 184 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 HOXC9P31274 260 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 IP6K1Q92551 441 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 EMILIN1Q9Y6C2 1016 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 CGNL1Q0VF96 1302 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 CCDC7Q96M83 1385 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 PEAK1Q9H792 1746 aa7.95□□□□□ -1.14
CDH13-206ENST00000562601 WNK3Q9BYP7 1800 aa7.94□□□□□ -1.14
CDH13-206ENST00000562601 TLL1O43897 1013 aa7.94□□□□□ -1.14
CDH13-206ENST00000562601 PRKCSHP14314 528 aaPredicted RBP7.94□□□□□ -1.14
CDH13-206ENST00000562601 KNSTRNQ9Y448 316 aa7.94□□□□□ -1.14
CDH13-206ENST00000562601 ANKRD26Q9UPS8 1709 aa7.94□□□□□ -1.14
CDH13-206ENST00000562601 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 HSP90AB2PQ58FF8 381 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 BRICD5Q6PL45 260 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 USHBP1Q8N6Y0 703 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 NKX2-3Q8TAU0 364 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 THAP11Q96EK4 314 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 CARD10Q9BWT7 1032 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 SLC6A16Q9GZN6 736 aa7.93□□□□□ -1.14
CDH13-206ENST00000562601 THRAP3Q9Y2W1 955 aaKnown RBP7.93□□□□□ -1.14
CDH13-206ENST00000562601 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
CDH13-206ENST00000562601 MOXD2PA6NHM9 499 aa7.92□□□□□ -1.14
CDH13-206ENST00000562601 BRPF1P55201 1214 aaPredicted RBP7.92□□□□□ -1.14
CDH13-206ENST00000562601 CC2D1BQ5T0F9 858 aaKnown RBP7.92□□□□□ -1.14
CDH13-206ENST00000562601 MORC1Q86VD1 984 aa7.92□□□□□ -1.14
CDH13-206ENST00000562601 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.92□□□□□ -1.14
CDH13-206ENST00000562601 ABCC6O95255 1503 aa7.92□□□□□ -1.14
CDH13-206ENST00000562601 LRRC37A3O60309 1634 aa7.92□□□□□ -1.14
CDH13-206ENST00000562601 KAT6BQ8WYB5 2073 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 DDB1Q16531 1140 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 NBPF6Q5VWK0 638 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 PPP1R18Q6NYC8 613 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 RSBN1LQ6PCB5 846 aaPredicted RBP7.91□□□□□ -1.14
CDH13-206ENST00000562601 RNF19BQ6ZMZ0 732 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 HLA-CQ95604 372 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 NBPF4Q96M43 638 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 USB1Q9BQ65 265 aaKnown RBP7.91□□□□□ -1.14
CDH13-206ENST00000562601 POLKQ9UBT6 870 aa7.91□□□□□ -1.14
CDH13-206ENST00000562601 BLMP54132 1417 aaPredicted RBP7.91□□□□□ -1.14
CDH13-206ENST00000562601 SPDYE5A6NIY4 337 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 EXOC5O00471 708 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 SPTLC1O15269 473 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms